RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeastyeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT4YNL101W YOR389WQ08912 624 aa7.16□□□□□ -1.26
AVT4YNL101W NUP192P47054 1683 aa7.16□□□□□ -1.26
AVT4YNL101W SIR4P11978 1358 aa7.15□□□□□ -1.26
AVT4YNL101W RPO21P04050 1733 aaKnown RBP7.15□□□□□ -1.26
AVT4YNL101W ECM32P32644 1121 aaKnown RBP7.15□□□□□ -1.26
AVT4YNL101W FYV10P40492 516 aa7.15□□□□□ -1.26
AVT4YNL101W SPR3P41901 512 aa7.15□□□□□ -1.26
AVT4YNL101W MCM16Q12262 181 aa7.15□□□□□ -1.26
AVT4YNL101W YRF1-4O13559 1382 aa7.15□□□□□ -1.26
AVT4YNL101W YML133CQ03099 1374 aa7.15□□□□□ -1.26
AVT4YNL101W YLL067CQ07888 1374 aa7.15□□□□□ -1.26
AVT4YNL101W YLL066CQ99208 1374 aa7.15□□□□□ -1.26
AVT4YNL101W SPT8P38915 602 aa7.15□□□□□ -1.27
AVT4YNL101W YMR124WP39523 943 aaKnown RBP7.15□□□□□ -1.27
AVT4YNL101W PEA2P40091 420 aa7.15□□□□□ -1.27
AVT4YNL101W RIA1P53893 1110 aa7.15□□□□□ -1.27
AVT4YNL101W NHA1Q99271 985 aa7.15□□□□□ -1.27
AVT4YNL101W KRS1P15180 591 aaKnown RBP7.14□□□□□ -1.27
AVT4YNL101W PRP16P15938 1071 aaPredicted RBP7.14□□□□□ -1.27
AVT4YNL101W ELM1P32801 640 aa7.14□□□□□ -1.27
AVT4YNL101W YKR023WP36119 530 aaKnown RBP7.14□□□□□ -1.27
AVT4YNL101W RPG1P38249 964 aaKnown RBP7.14□□□□□ -1.27
AVT4YNL101W YOR223WQ12015 292 aa7.14□□□□□ -1.27
AVT4YNL101W APL4Q12028 832 aa7.14□□□□□ -1.27
AVT4YNL101W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
AVT4YNL101W REI1P38344 393 aaPredicted RBP7.13□□□□□ -1.27
AVT4YNL101W AIM20P40451 204 aa7.13□□□□□ -1.27
AVT4YNL101W YGL242CP53066 181 aa7.13□□□□□ -1.27
AVT4YNL101W SPO1P53541 631 aa7.13□□□□□ -1.27
AVT4YNL101W TIM11P81449 96 aaPredicted RBP7.13□□□□□ -1.27
AVT4YNL101W YSP2Q06681 1438 aa7.13□□□□□ -1.27
AVT4YNL101W YAP3P38749 330 aa7.13□□□□□ -1.27
AVT4YNL101W SEC5P89102 971 aa7.13□□□□□ -1.27
AVT4YNL101W ATG9Q12142 997 aa7.13□□□□□ -1.27
AVT4YNL101W RUD3Q12234 484 aaKnown RBP7.13□□□□□ -1.27
AVT4YNL101W SMC6Q12749 1114 aa7.13□□□□□ -1.27
AVT4YNL101W KEX2P13134 814 aa7.12□□□□□ -1.27
AVT4YNL101W PRE10P21242 288 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
AVT4YNL101W STE11P23561 717 aa7.12□□□□□ -1.27
AVT4YNL101W SEC66P33754 206 aa7.12□□□□□ -1.27
AVT4YNL101W TFG1P41895 735 aaPredicted RBP7.12□□□□□ -1.27
AVT4YNL101W RTF1P53064 558 aa7.12□□□□□ -1.27
AVT4YNL101W ARD1P07347 238 aaPredicted RBP7.12□□□□□ -1.27
AVT4YNL101W UBC1P21734 215 aaKnown RBP7.12□□□□□ -1.27
AVT4YNL101W MET10P39692 1035 aa7.12□□□□□ -1.27
AVT4YNL101W HUL5P53119 910 aa7.12□□□□□ -1.27
AVT4YNL101W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
AVT4YNL101W CDC37P06101 506 aaKnown RBP7.11□□□□□ -1.27
AVT4YNL101W PRX1P34227 261 aaKnown RBP7.11□□□□□ -1.27
AVT4YNL101W YRB1P41920 201 aaKnown RBP7.11□□□□□ -1.27
AVT4YNL101W BET4Q00618 327 aa7.11□□□□□ -1.27
AVT4YNL101W CUS1Q02554 436 aaPredicted RBP7.11□□□□□ -1.27
AVT4YNL101W ARR1Q06596 294 aa7.11□□□□□ -1.27
AVT4YNL101W VAS1P07806 1104 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W RRP43P25359 394 aaPredicted RBP7.1□□□□□ -1.27
AVT4YNL101W MUD2P36084 527 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W YNG2P38806 282 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W CCT4P39078 528 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W ALD4P46367 519 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W ENT3P47160 408 aa7.1□□□□□ -1.27
AVT4YNL101W JJJ1P53863 590 aa7.1□□□□□ -1.27
AVT4YNL101W WAR1Q03631 944 aa7.1□□□□□ -1.27
AVT4YNL101W PDR18P53756 1333 aa7.1□□□□□ -1.27
AVT4YNL101W GPA1P08539 472 aa7.1□□□□□ -1.27
AVT4YNL101W RPL19AP0CX82 189 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W RPL19BP0CX83 189 aaPredicted RBP7.1□□□□□ -1.27
AVT4YNL101W CDC15P27636 974 aa7.1□□□□□ -1.27
AVT4YNL101W SCT1P32784 759 aa7.1□□□□□ -1.27
AVT4YNL101W ISW1P38144 1129 aa7.1□□□□□ -1.27
AVT4YNL101W APT1P49435 187 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W SNU71P53207 620 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W STE20Q03497 939 aaKnown RBP7.1□□□□□ -1.27
AVT4YNL101W BNR1P40450 1375 aa7.09□□□□□ -1.27
AVT4YNL101W PMR1P13586 950 aa7.09□□□□□ -1.27
AVT4YNL101W PDB1P32473 366 aaKnown RBP7.09□□□□□ -1.27
AVT4YNL101W YKR018CP36114 725 aa7.09□□□□□ -1.27
AVT4YNL101W STR2P47164 639 aa7.09□□□□□ -1.27
AVT4YNL101W KRE28Q04431 385 aa7.09□□□□□ -1.27
AVT4YNL101W GGA1Q06336 557 aa7.09□□□□□ -1.27
AVT4YNL101W SWI1P09547 1314 aa7.09□□□□□ -1.27
AVT4YNL101W KAR2P16474 682 aaKnown RBP7.09□□□□□ -1.28
AVT4YNL101W YER130CP39959 443 aa7.09□□□□□ -1.28
AVT4YNL101W HIF1Q12373 385 aa7.09□□□□□ -1.28
AVT4YNL101W TY4A-HQ6Q5P6 413 aa7.09□□□□□ -1.28
AVT4YNL101W TY4B-PA0A0B7P3V8 1104 aa7.08□□□□□ -1.28
AVT4YNL101W RPO26P20435 155 aa7.08□□□□□ -1.28
AVT4YNL101W ARG1P22768 420 aa7.08□□□□□ -1.28
AVT4YNL101W CDC3P32457 520 aaKnown RBP7.08□□□□□ -1.28
AVT4YNL101W KAR9P32526 644 aa7.08□□□□□ -1.28
AVT4YNL101W YJR079WP47126 109 aa7.08□□□□□ -1.28
AVT4YNL101W RCM1P53972 490 aa7.08□□□□□ -1.28
AVT4YNL101W TAF8Q03750 510 aa7.08□□□□□ -1.28
AVT4YNL101W DPL1Q05567 589 aa7.08□□□□□ -1.28
AVT4YNL101W TSR3Q12094 313 aaKnown RBP7.08□□□□□ -1.28
AVT4YNL101W CHC1P22137 1653 aaKnown RBP7.08□□□□□ -1.28
AVT4YNL101W GAL11P19659 1081 aa7.07□□□□□ -1.28
AVT4YNL101W GCD6P32501 712 aaKnown RBP7.07□□□□□ -1.28
AVT4YNL101W SRP40P32583 406 aaPredicted RBP7.07□□□□□ -1.28
AVT4YNL101W NPL4P33755 580 aa7.07□□□□□ -1.28
AVT4YNL101W RRP1P35178 278 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms