RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A GSM1P42950 618 aa15.14■□□□□ 0.01
LSM3YLR438C-A PBY1P38254 753 aa15.13■□□□□ 0.01
LSM3YLR438C-A HAL5P38970 855 aaKnown RBP15.13■□□□□ 0.01
LSM3YLR438C-A FPK1P53739 893 aa15.13■□□□□ 0.01
LSM3YLR438C-A MSM1P22438 575 aa15.12■□□□□ 0.01
LSM3YLR438C-A GLO3P38682 493 aaKnown RBP15.12■□□□□ 0.01
LSM3YLR438C-A SET4P42948 560 aa15.12■□□□□ 0.01
LSM3YLR438C-A PRP42Q03776 544 aaKnown RBP15.12■□□□□ 0.01
LSM3YLR438C-A INM2Q05533 292 aa15.12■□□□□ 0.01
LSM3YLR438C-A ATG20Q07528 640 aa15.12■□□□□ 0.01
LSM3YLR438C-A RRG1Q12167 365 aaPredicted RBP15.12■□□□□ 0.01
LSM3YLR438C-A DIP2Q12220 943 aaPredicted RBP15.12■□□□□ 0.01
LSM3YLR438C-A YIR042CP40586 236 aa15.11■□□□□ 0.01
LSM3YLR438C-A YFH7P43591 353 aa15.1■□□□□ 0.01
LSM3YLR438C-A MRPS35P53292 345 aa15.1■□□□□ 0.01
LSM3YLR438C-A KTR1P27810 393 aaKnown RBP15.09■□□□□ 0.01
LSM3YLR438C-A SLI15P38283 698 aa15.09■□□□□ 0.01
LSM3YLR438C-A ENP2P48234 707 aaKnown RBP15.09■□□□□ 0.01
LSM3YLR438C-A RPT3P33298 428 aaKnown RBP15.08■□□□□ 0
LSM3YLR438C-A OSH3P38713 996 aaKnown RBP15.08■□□□□ 0
LSM3YLR438C-A STM1P39015 273 aaKnown RBP15.08■□□□□ 0
LSM3YLR438C-A FPR4Q06205 392 aaPredicted RBP15.08■□□□□ 0
LSM3YLR438C-A TOS4Q06266 489 aa15.08■□□□□ 0
LSM3YLR438C-A GAS5Q08193 484 aa15.08■□□□□ 0
LSM3YLR438C-A AFG2P32794 780 aa15.07■□□□□ 0
LSM3YLR438C-A CRF1Q04930 467 aa15.07■□□□□ 0
LSM3YLR438C-A WRS1Q12109 432 aaKnown RBP15.07■□□□□ 0
LSM3YLR438C-A PTK1P36002 662 aaPredicted RBP15.06■□□□□ 0
LSM3YLR438C-A EPS1P40557 701 aa15.06■□□□□ 0
LSM3YLR438C-A SEN54Q02825 467 aaPredicted RBP15.06■□□□□ 0
LSM3YLR438C-A CYB2P00175 591 aa15.05■□□□□ -0
LSM3YLR438C-A MDL2P33311 773 aa15.05■□□□□ -0
LSM3YLR438C-A PIB2P53191 635 aa15.05■□□□□ -0
LSM3YLR438C-A RIM20Q12033 661 aa15.05■□□□□ -0
LSM3YLR438C-A ARG82P07250 355 aa15.04■□□□□ -0
LSM3YLR438C-A BRN1P38170 754 aa15.04■□□□□ -0
LSM3YLR438C-A GCR2Q01722 534 aa15.04■□□□□ -0
LSM3YLR438C-A BOI1P38041 980 aaKnown RBP15.03■□□□□ -0
LSM3YLR438C-A YMR147WP40218 223 aaKnown RBP15.03■□□□□ -0
LSM3YLR438C-A ACK1Q07622 623 aaPredicted RBP15.03■□□□□ -0
LSM3YLR438C-A DLD1P32891 587 aa15.01□□□□□ -0.01
LSM3YLR438C-A NPL4P33755 580 aa15.01□□□□□ -0.01
LSM3YLR438C-A GEF1P37020 779 aa15.01□□□□□ -0.01
LSM3YLR438C-A TRM44Q02648 567 aaKnown RBP15.01□□□□□ -0.01
LSM3YLR438C-A TPM1P17536 199 aaKnown RBP15□□□□□ -0.01
LSM3YLR438C-A OPI1P21957 404 aa15□□□□□ -0.01
LSM3YLR438C-A RPS7AP26786 190 aaKnown RBP15□□□□□ -0.01
LSM3YLR438C-A GRX7P38068 203 aa15□□□□□ -0.01
LSM3YLR438C-A IRC8P47046 822 aa15□□□□□ -0.01
LSM3YLR438C-A PUS6P53294 404 aa15□□□□□ -0.01
LSM3YLR438C-A GLC3P32775 704 aa14.99□□□□□ -0.01
LSM3YLR438C-A IOC3P43596 787 aa14.99□□□□□ -0.01
LSM3YLR438C-A APL6P46682 809 aa14.99□□□□□ -0.01
LSM3YLR438C-A AIM7Q12156 149 aa14.99□□□□□ -0.01
LSM3YLR438C-A FAS2P19097 1887 aaKnown RBP14.98□□□□□ -0.01
LSM3YLR438C-A PIP2P52960 996 aa14.98□□□□□ -0.01
LSM3YLR438C-A TAH18Q12181 623 aa14.98□□□□□ -0.01
LSM3YLR438C-A AAP1P37898 856 aaKnown RBP14.97□□□□□ -0.01
LSM3YLR438C-A TIM50Q02776 476 aa14.97□□□□□ -0.01
LSM3YLR438C-A THS1P04801 734 aaKnown RBP14.96□□□□□ -0.01
LSM3YLR438C-A RTG2P32608 588 aaKnown RBP14.96□□□□□ -0.01
LSM3YLR438C-A RRP8P38961 392 aaKnown RBP14.96□□□□□ -0.01
LSM3YLR438C-A FET4P40988 552 aa14.96□□□□□ -0.01
LSM3YLR438C-A BBC1P47068 1157 aa14.96□□□□□ -0.01
LSM3YLR438C-A FIG2P25653 1609 aa14.95□□□□□ -0.02
LSM3YLR438C-A HKR1P41809 1802 aa14.95□□□□□ -0.02
LSM3YLR438C-A GAP1P19145 602 aaPredicted RBP14.95□□□□□ -0.02
LSM3YLR438C-A VPS4P52917 437 aa14.95□□□□□ -0.02
LSM3YLR438C-A MET1P36150 593 aa14.94□□□□□ -0.02
LSM3YLR438C-A HXT13P39924 564 aa14.94□□□□□ -0.02
LSM3YLR438C-A HXT17P53631 564 aa14.94□□□□□ -0.02
LSM3YLR438C-A PKH3Q03306 898 aaPredicted RBP14.94□□□□□ -0.02
LSM3YLR438C-A DUR1,2P32528 1835 aaKnown RBP14.94□□□□□ -0.02
LSM3YLR438C-A SNF3P10870 884 aa14.93□□□□□ -0.02
LSM3YLR438C-A KAR5Q04746 504 aa14.93□□□□□ -0.02
LSM3YLR438C-A HPR1P17629 752 aaKnown RBP14.92□□□□□ -0.02
LSM3YLR438C-A SLN1P39928 1220 aaPredicted RBP14.92□□□□□ -0.02
LSM3YLR438C-A KRI1P42846 591 aaKnown RBP14.92□□□□□ -0.02
LSM3YLR438C-A YGR117CP53270 476 aa14.92□□□□□ -0.02
LSM3YLR438C-A FLO11P08640 1367 aa14.9□□□□□ -0.02
LSM3YLR438C-A STV1P37296 890 aa14.9□□□□□ -0.02
LSM3YLR438C-A SSF2Q12153 453 aaPredicted RBP14.9□□□□□ -0.02
LSM3YLR438C-A LAM4P38800 1345 aa14.9□□□□□ -0.02
LSM3YLR438C-A AAD16Q02895 342 aa14.88□□□□□ -0.03
LSM3YLR438C-A MRD1Q06106 887 aaKnown RBP14.88□□□□□ -0.03
LSM3YLR438C-A YPL260WQ08977 551 aa14.88□□□□□ -0.03
LSM3YLR438C-A YLR278CQ05854 1341 aa14.88□□□□□ -0.03
LSM3YLR438C-A COQ1P18900 473 aa14.87□□□□□ -0.03
LSM3YLR438C-A PPM2Q08282 695 aa14.87□□□□□ -0.03
LSM3YLR438C-A EMP47P43555 445 aa14.86□□□□□ -0.03
LSM3YLR438C-A YJL171CP46992 396 aa14.86□□□□□ -0.03
LSM3YLR438C-A CBP1P07252 654 aa14.85□□□□□ -0.03
LSM3YLR438C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data14.85□□□□□ -0.03not detected
LSM3YLR438C-A CIC1P38779 376 aaKnown RBP14.85□□□□□ -0.03
LSM3YLR438C-A RTS1P38903 757 aa14.85□□□□□ -0.03
LSM3YLR438C-A PEX21P50091 288 aa14.85□□□□□ -0.03
LSM3YLR438C-A MTC3P53077 123 aa14.85□□□□□ -0.03
LSM3YLR438C-A SIS2P36024 562 aa14.84□□□□□ -0.03
LSM3YLR438C-A NSG2P53898 299 aa14.84□□□□□ -0.03
LSM3YLR438C-A PUS5Q06244 254 aa14.84□□□□□ -0.03
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms