RNA–Protein interactions for RNA: YJL090C

DPB11, Transcript of DNA replication initiation protein, yeast

Gene DPB11, Length 2,295 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB11	YJL090C	ROG3	P43602	733 aa		4.16	□□□□□ -1.74
DPB11	YJL090C	MRPL16	P38064	232 aa		4.15	□□□□□ -1.74
DPB11	YJL090C	CAF120	P53836	1060 aa		4.15	□□□□□ -1.74
DPB11	YJL090C	SEN54	Q02825	467 aa	Predicted RBP	4.15	□□□□□ -1.74
DPB11	YJL090C	TY1A-MR1	Q04215	440 aa		4.15	□□□□□ -1.74
DPB11	YJL090C	RGP1	P16664	663 aa		4.15	□□□□□ -1.75
DPB11	YJL090C	KTR2	P33550	425 aa		4.15	□□□□□ -1.75
DPB11	YJL090C	ACO2	P39533	789 aa		4.15	□□□□□ -1.75
DPB11	YJL090C	FIR1	P40020	876 aa		4.15	□□□□□ -1.75
DPB11	YJL090C	YIR007W	P40566	764 aa		4.15	□□□□□ -1.75
DPB11	YJL090C	MSC6	Q08818	692 aa	Known RBP	4.15	□□□□□ -1.75
DPB11	YJL090C	STB3	Q12427	513 aa		4.15	□□□□□ -1.75
DPB11	YJL090C	RPC31	P17890	251 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	SEC20	P28791	383 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	IPL1	P38991	367 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	CUS1	Q02554	436 aa	Predicted RBP	4.14	□□□□□ -1.75
DPB11	YJL090C	TRS120	Q04183	1289 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	FRT1	Q99332	602 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	MSN1	P22148	382 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
DPB11	YJL090C	CUZ1	P53899	274 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	UFD2	P54860	961 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	YMR265C	Q03508	461 aa	Known RBP	4.14	□□□□□ -1.75
DPB11	YJL090C	NUT2	Q06213	157 aa		4.14	□□□□□ -1.75
DPB11	YJL090C	DIT1	P21623	536 aa		4.13	□□□□□ -1.75
DPB11	YJL090C	SMC1	P32908	1225 aa		4.13	□□□□□ -1.75
DPB11	YJL090C	ISW1	P38144	1129 aa		4.13	□□□□□ -1.75
DPB11	YJL090C	GIP1	P38229	639 aa		4.13	□□□□□ -1.75
DPB11	YJL090C	SKP1	P52286	194 aa		4.13	□□□□□ -1.75
DPB11	YJL090C	RPP1A	P05318	106 aa	Predicted RBP	4.12	□□□□□ -1.75
DPB11	YJL090C	BSD2	P38356	321 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	YOR296W	Q08748	1289 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
DPB11	YJL090C	YBR287W	P38355	427 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	APM2	P38700	605 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	RAD55	P38953	406 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	THI12	P42883	340 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	THI5	P43534	340 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	THI11	P47183	340 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	KRE33	P53914	1056 aa	Known RBP	4.12	□□□□□ -1.75
DPB11	YJL090C	YPL062W	Q02781	134 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	THI13	Q07748	340 aa		4.12	□□□□□ -1.75
DPB11	YJL090C	CCP1	P00431	361 aa		4.11	□□□□□ -1.75
DPB11	YJL090C	HEM3	P28789	327 aa		4.11	□□□□□ -1.75
DPB11	YJL090C	PPX1	P38698	397 aa		4.11	□□□□□ -1.75
DPB11	YJL090C	NCL1	P38205	684 aa	Known RBP	4.11	□□□□□ -1.75
DPB11	YJL090C	NTA1	P40354	457 aa		4.11	□□□□□ -1.75
DPB11	YJL090C	RGD2	P43556	714 aa		4.11	□□□□□ -1.75
DPB11	YJL090C	ADE12	P80210	433 aa	Known RBP	4.11	□□□□□ -1.75
DPB11	YJL090C	YDL176W	Q12027	708 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	FPS1	P23900	669 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	CEM1	P39525	442 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	ITC1	P53125	1264 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	YNR040W	P53736	256 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	YNL011C	P53980	444 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	MNL2	Q12205	849 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	WHI5	Q12416	295 aa		4.1	□□□□□ -1.75
DPB11	YJL090C	IRS4	P36115	615 aa	Known RBP	4.09	□□□□□ -1.75
DPB11	YJL090C	GPI13	Q07830	1017 aa		4.09	□□□□□ -1.75
DPB11	YJL090C	TIF6	Q12522	245 aa	Known RBP	4.09	□□□□□ -1.75
DPB11	YJL090C	AIM46	P38885	310 aa		4.09	□□□□□ -1.76
DPB11	YJL090C	PSY2	P40164	858 aa		4.09	□□□□□ -1.76
DPB11	YJL090C	YDR461C-A	Q2V2P7	80 aa		4.09	□□□□□ -1.76
DPB11	YJL090C	YIL165C	P40446	119 aa		4.08	□□□□□ -1.76
DPB11	YJL090C	CDC55	Q00362	526 aa		4.08	□□□□□ -1.76
DPB11	YJL090C	HEH2	Q03281	663 aa		4.08	□□□□□ -1.76
DPB11	YJL090C	EMG1	Q06287	252 aa	Known RBP	4.08	□□□□□ -1.76
DPB11	YJL090C	SYT1	Q06836	1226 aa		4.08	□□□□□ -1.76
DPB11	YJL090C	RSC4	Q02206	625 aa		4.07	□□□□□ -1.76
DPB11	YJL090C	MET4	P32389	672 aa		4.07	□□□□□ -1.76
DPB11	YJL090C	MSC7	P38694	644 aa		4.07	□□□□□ -1.76
DPB11	YJL090C	BSC2	Q05611	235 aa		4.07	□□□□□ -1.76
DPB11	YJL090C	YER156C	P40093	338 aa	Known RBP	4.06	□□□□□ -1.76
DPB11	YJL090C	POL32	P47110	350 aa		4.06	□□□□□ -1.76
DPB11	YJL090C	SAM37	P50110	327 aa		4.06	□□□□□ -1.76
DPB11	YJL090C	LYS5	P50113	272 aa		4.06	□□□□□ -1.76
DPB11	YJL090C	TY1A-DR2	Q03964	440 aa	Known RBP	4.06	□□□□□ -1.76
DPB11	YJL090C	HPF1	Q05164	967 aa		4.05	□□□□□ -1.76
DPB11	YJL090C	IDI1	P15496	288 aa		4.05	□□□□□ -1.76
DPB11	YJL090C	RSC2	Q06488	889 aa		4.05	□□□□□ -1.76
DPB11	YJL090C	PHO4	P07270	312 aa	Known RBP	4.04	□□□□□ -1.76
DPB11	YJL090C	ASF1	P32447	279 aa		4.04	□□□□□ -1.76
DPB11	YJL090C	GCD6	P32501	712 aa	Known RBP	4.04	□□□□□ -1.76
DPB11	YJL090C	NOC3	Q07896	663 aa	Predicted RBP	4.04	□□□□□ -1.76
DPB11	YJL090C	ATE1	P16639	503 aa		4.04	□□□□□ -1.76
DPB11	YJL090C	ECM2	P38241	364 aa	Known RBP	4.04	□□□□□ -1.76
DPB11	YJL090C	PPT1	P53043	513 aa		4.04	□□□□□ -1.76
DPB11	YJL090C	YGR035C	P53222	116 aa		4.04	□□□□□ -1.76
DPB11	YJL090C	MGE1	P38523	228 aa		4.03	□□□□□ -1.76
DPB11	YJL090C	YHL008C	P38750	627 aa		4.03	□□□□□ -1.76
DPB11	YJL090C	CIC1	P38779	376 aa	Known RBP	4.03	□□□□□ -1.76
DPB11	YJL090C	PRK1	P40494	810 aa		4.03	□□□□□ -1.76
DPB11	YJL090C	DAK2	P43550	591 aa		4.03	□□□□□ -1.76
DPB11	YJL090C	YJL181W	P46987	611 aa		4.03	□□□□□ -1.76
DPB11	YJL090C	INP54	Q08227	384 aa	Known RBP	4.03	□□□□□ -1.76
DPB11	YJL090C	DPH6	Q12429	685 aa		4.03	□□□□□ -1.76
DPB11	YJL090C	PYC2	P32327	1180 aa	Known RBP	4.02	□□□□□ -1.77
DPB11	YJL090C	VPS35	P34110	944 aa		4.02	□□□□□ -1.77
DPB11	YJL090C	JJJ3	P47138	172 aa		4.02	□□□□□ -1.77
DPB11	YJL090C	CTR9	P89105	1077 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms