RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W SET4P42948 560 aa6.53□□□□□ -1.36
SHE10YGL228W TSR3Q12094 313 aaKnown RBP6.53□□□□□ -1.36
SHE10YGL228W RRI2Q12348 645 aa6.53□□□□□ -1.36
SHE10YGL228W CTT1P06115 562 aa6.53□□□□□ -1.36
SHE10YGL228W RET1P22276 1149 aaKnown RBP6.53□□□□□ -1.36
SHE10YGL228W IRC4Q03036 179 aa6.53□□□□□ -1.36
SHE10YGL228W BRE1Q07457 700 aaKnown RBP6.53□□□□□ -1.36
SHE10YGL228W RIM20Q12033 661 aa6.53□□□□□ -1.36
SHE10YGL228W LCB1P25045 558 aaKnown RBP6.52□□□□□ -1.37
SHE10YGL228W YER156CP40093 338 aaKnown RBP6.52□□□□□ -1.37
SHE10YGL228W YIR042CP40586 236 aa6.52□□□□□ -1.37
SHE10YGL228W TOS4Q06266 489 aa6.52□□□□□ -1.37
SHE10YGL228W ISW2Q08773 1120 aa6.52□□□□□ -1.37
SHE10YGL228W KTR1P27810 393 aaKnown RBP6.51□□□□□ -1.37
SHE10YGL228W ICL1P28240 557 aaPredicted RBP6.51□□□□□ -1.37
SHE10YGL228W AAP1P37898 856 aaKnown RBP6.51□□□□□ -1.37
SHE10YGL228W PBY1P38254 753 aa6.51□□□□□ -1.37
SHE10YGL228W YMR147WP40218 223 aaKnown RBP6.51□□□□□ -1.37
SHE10YGL228W RPT3P33298 428 aaKnown RBP6.5□□□□□ -1.37
SHE10YGL228W INM2Q05533 292 aa6.5□□□□□ -1.37
SHE10YGL228W NUG1P40010 520 aaKnown RBP6.5□□□□□ -1.37
SHE10YGL228W YIR014WP40570 242 aa6.5□□□□□ -1.37
SHE10YGL228W GAS5Q08193 484 aa6.5□□□□□ -1.37
SHE10YGL228W FLO1P32768 1537 aa6.49□□□□□ -1.37
SHE10YGL228W PIF1P07271 859 aa6.49□□□□□ -1.37
SHE10YGL228W OPY1P38271 328 aa6.49□□□□□ -1.37
SHE10YGL228W STM1P39015 273 aaKnown RBP6.49□□□□□ -1.37
SHE10YGL228W FPR4Q06205 392 aaPredicted RBP6.49□□□□□ -1.37
SHE10YGL228W GRX6Q12438 231 aa6.49□□□□□ -1.37
SHE10YGL228W LAM4P38800 1345 aa6.49□□□□□ -1.37
SHE10YGL228W TOP1P04786 769 aa6.48□□□□□ -1.37
SHE10YGL228W GRX7P38068 203 aa6.48□□□□□ -1.37
SHE10YGL228W GSM1P42950 618 aa6.48□□□□□ -1.37
SHE10YGL228W FLO11P08640 1367 aa6.48□□□□□ -1.37
SHE10YGL228W YKU70P32807 602 aa6.47□□□□□ -1.37
SHE10YGL228W PKH3Q03306 898 aaPredicted RBP6.47□□□□□ -1.37
SHE10YGL228W UBX2Q04228 584 aa6.47□□□□□ -1.37
SHE10YGL228W RLF2Q12495 606 aa6.47□□□□□ -1.37
SHE10YGL228W PTK1P36002 662 aaPredicted RBP6.47□□□□□ -1.37
SHE10YGL228W BBC1P47068 1157 aa6.47□□□□□ -1.37
SHE10YGL228W KAR5Q04746 504 aa6.47□□□□□ -1.37
SHE10YGL228W TRL1P09880 827 aaKnown RBP6.46□□□□□ -1.38
SHE10YGL228W OSH3P38713 996 aaKnown RBP6.46□□□□□ -1.38
SHE10YGL228W YFH7P43591 353 aa6.46□□□□□ -1.38
SHE10YGL228W DPL1Q05567 589 aa6.46□□□□□ -1.38
SHE10YGL228W WRS1Q12109 432 aaKnown RBP6.46□□□□□ -1.38
SHE10YGL228W PGA3Q12746 312 aaKnown RBP6.46□□□□□ -1.38
SHE10YGL228W JJJ2P46997 583 aa6.45□□□□□ -1.38
SHE10YGL228W ARG82P07250 355 aa6.45□□□□□ -1.38
SHE10YGL228W SNF3P10870 884 aa6.45□□□□□ -1.38
SHE10YGL228W PCT1P13259 424 aa6.45□□□□□ -1.38
SHE10YGL228W OPI1P21957 404 aa6.45□□□□□ -1.38
SHE10YGL228W MDL2P33311 773 aa6.45□□□□□ -1.38
SHE10YGL228W AIM9P40053 627 aaKnown RBP6.45□□□□□ -1.38
SHE10YGL228W IRC8P47046 822 aa6.45□□□□□ -1.38
SHE10YGL228W NSG2P53898 299 aa6.45□□□□□ -1.38
SHE10YGL228W PRP42Q03776 544 aaKnown RBP6.45□□□□□ -1.38
SHE10YGL228W PPM2Q08282 695 aa6.45□□□□□ -1.38
SHE10YGL228W TAH18Q12181 623 aa6.45□□□□□ -1.38
SHE10YGL228W RPS7AP26786 190 aaKnown RBP6.44□□□□□ -1.38
SHE10YGL228W CIC1P38779 376 aaKnown RBP6.44□□□□□ -1.38
SHE10YGL228W SHC1P39000 512 aa6.44□□□□□ -1.38
SHE10YGL228W CYB2P00175 591 aa6.43□□□□□ -1.38
SHE10YGL228W COQ1P18900 473 aa6.43□□□□□ -1.38
SHE10YGL228W AFG2P32794 780 aa6.43□□□□□ -1.38
SHE10YGL228W BOI1P38041 980 aaKnown RBP6.43□□□□□ -1.38
SHE10YGL228W TIF4632P39936 914 aaKnown RBP6.43□□□□□ -1.38
SHE10YGL228W SQS1P53866 767 aaKnown RBP6.43□□□□□ -1.38
SHE10YGL228W RRG1Q12167 365 aaPredicted RBP6.43□□□□□ -1.38
SHE10YGL228W CHO2P05374 869 aaKnown RBP6.42□□□□□ -1.38
SHE10YGL228W GAP1P19145 602 aaPredicted RBP6.42□□□□□ -1.38
SHE10YGL228W STV1P37296 890 aa6.42□□□□□ -1.38
SHE10YGL228W KRI1P42846 591 aaKnown RBP6.42□□□□□ -1.38
SHE10YGL228W ATG20Q07528 640 aa6.42□□□□□ -1.38
SHE10YGL228W PSF3Q12146 194 aa6.42□□□□□ -1.38
SHE10YGL228W RNR2P09938 399 aaKnown RBP6.42□□□□□ -1.38
SHE10YGL228W SRS2P12954 1174 aa6.42□□□□□ -1.38
SHE10YGL228W YHL050CP38721 697 aa6.42□□□□□ -1.38
SHE10YGL228W ENP2P48234 707 aaKnown RBP6.42□□□□□ -1.38
SHE10YGL228W MYO1P08964 1928 aa6.41□□□□□ -1.38
SHE10YGL228W IMP2'P32351 346 aa6.41□□□□□ -1.38
SHE10YGL228W IME2P32581 645 aa6.41□□□□□ -1.38
SHE10YGL228W MET1P36150 593 aa6.41□□□□□ -1.38
SHE10YGL228W IOC3P43596 787 aa6.41□□□□□ -1.38
SHE10YGL228W PUS6P53294 404 aa6.41□□□□□ -1.38
SHE10YGL228W NPL4P33755 580 aa6.4□□□□□ -1.38
SHE10YGL228W GEF1P37020 779 aa6.4□□□□□ -1.38
SHE10YGL228W VID28P40547 921 aa6.4□□□□□ -1.38
SHE10YGL228W APL6P46682 809 aa6.4□□□□□ -1.38
SHE10YGL228W NPA3P47122 385 aa6.4□□□□□ -1.38
SHE10YGL228W VPS4P52917 437 aa6.4□□□□□ -1.38
SHE10YGL228W PIP2P52960 996 aa6.4□□□□□ -1.38
SHE10YGL228W TRM44Q02648 567 aaKnown RBP6.4□□□□□ -1.38
SHE10YGL228W VPS20Q04272 221 aa6.4□□□□□ -1.38
SHE10YGL228W SSA1P10591 642 aaKnown RBP6.39□□□□□ -1.39
SHE10YGL228W PEP3P27801 918 aa6.39□□□□□ -1.39
SHE10YGL228W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SHE10YGL228W RRP8P38961 392 aaKnown RBP6.39□□□□□ -1.39
SHE10YGL228W HDA1P53973 706 aa6.39□□□□□ -1.39
SHE10YGL228W SSF2Q12153 453 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms