RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W PSH1Q12161 406 aa8.05□□□□□ -1.12
CDC1YDR182W SEN54Q02825 467 aaPredicted RBP8.04□□□□□ -1.12
CDC1YDR182W TOS4Q06266 489 aa8.04□□□□□ -1.12
CDC1YDR182W HXT10P43581 546 aa8.03□□□□□ -1.12
CDC1YDR182W CWC15Q03772 175 aaKnown RBP8.03□□□□□ -1.12
CDC1YDR182W RAD24P32641 659 aa8.02□□□□□ -1.13
CDC1YDR182W SET1P38827 1080 aaKnown RBP8.02□□□□□ -1.13
CDC1YDR182W PNT1P38969 423 aa8.02□□□□□ -1.13
CDC1YDR182W UBX2Q04228 584 aa8.02□□□□□ -1.13
CDC1YDR182W CRF1Q04930 467 aa8.02□□□□□ -1.13
CDC1YDR182W POM152P39685 1337 aa8.02□□□□□ -1.13
CDC1YDR182W SAC3P46674 1301 aa8.02□□□□□ -1.13
CDC1YDR182W SUI2P20459 304 aaKnown RBP8.01□□□□□ -1.13
CDC1YDR182W CBP1P07252 654 aa8□□□□□ -1.13
CDC1YDR182W IRC4Q03036 179 aa8□□□□□ -1.13
CDC1YDR182W RPS7AP26786 190 aaKnown RBP8□□□□□ -1.13
CDC1YDR182W PRP42Q03776 544 aaKnown RBP8□□□□□ -1.13
CDC1YDR182W NOP8Q08287 484 aaPredicted RBP8□□□□□ -1.13
CDC1YDR182W DUR1,2P32528 1835 aaKnown RBP8□□□□□ -1.13
CDC1YDR182W LCB1P25045 558 aaKnown RBP7.99□□□□□ -1.13
CDC1YDR182W SRC1Q03707 834 aa7.99□□□□□ -1.13
CDC1YDR182W UBP12P39538 1254 aa7.98□□□□□ -1.13
CDC1YDR182W TYW1Q08960 810 aaKnown RBP7.98□□□□□ -1.13
CDC1YDR182W TIF6Q12522 245 aaKnown RBP7.97□□□□□ -1.13
CDC1YDR182W CSR2Q12734 1121 aa7.97□□□□□ -1.13
CDC1YDR182W ARG82P07250 355 aa7.96□□□□□ -1.13
CDC1YDR182W UTP7P40055 554 aaKnown RBP7.96□□□□□ -1.13
CDC1YDR182W MTC5Q03897 1148 aa7.96□□□□□ -1.13
CDC1YDR182W SNU66Q12420 587 aaPredicted RBP7.96□□□□□ -1.13
CDC1YDR182W HVG1P0CE11 249 aa7.95□□□□□ -1.14
CDC1YDR182W SLA1P32790 1244 aa7.95□□□□□ -1.14
CDC1YDR182W RPT3P33298 428 aaKnown RBP7.95□□□□□ -1.14
CDC1YDR182W BOI2P39969 1040 aa7.95□□□□□ -1.14
CDC1YDR182W MTC3P53077 123 aa7.95□□□□□ -1.14
CDC1YDR182W CSI1Q04368 295 aa7.95□□□□□ -1.14
CDC1YDR182W DMA1P38823 416 aa7.94□□□□□ -1.14
CDC1YDR182W YPP1P46951 817 aa7.94□□□□□ -1.14
CDC1YDR182W JJJ2P46997 583 aa7.94□□□□□ -1.14
CDC1YDR182W GSC2P40989 1895 aa7.94□□□□□ -1.14
CDC1YDR182W SUP35P05453 685 aaKnown RBP7.94□□□□□ -1.14
CDC1YDR182W PCS60P38137 543 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
CDC1YDR182W BSD2P38356 321 aa7.94□□□□□ -1.14
CDC1YDR182W VPS29P38759 282 aa7.94□□□□□ -1.14
CDC1YDR182W WRS1Q12109 432 aaKnown RBP7.94□□□□□ -1.14
CDC1YDR182W SDH2P21801 266 aa7.93□□□□□ -1.14
CDC1YDR182W SRF1Q12516 437 aa7.93□□□□□ -1.14
CDC1YDR182W ADR1P07248 1323 aa7.92□□□□□ -1.14
CDC1YDR182W VPS27P40343 622 aaKnown RBP7.92□□□□□ -1.14
CDC1YDR182W YAP5P40574 245 aa7.92□□□□□ -1.14
CDC1YDR182W RRT6P53117 311 aaPredicted RBP7.92□□□□□ -1.14
CDC1YDR182W RPP0P05317 312 aaKnown RBP7.91□□□□□ -1.14
CDC1YDR182W RAM2P29703 316 aa7.91□□□□□ -1.14
CDC1YDR182W ACK1Q07622 623 aaPredicted RBP7.91□□□□□ -1.14
CDC1YDR182W NUG1P40010 520 aaKnown RBP7.9□□□□□ -1.14
CDC1YDR182W NIT1P40447 199 aa7.9□□□□□ -1.14
CDC1YDR182W YIR042CP40586 236 aa7.9□□□□□ -1.14
CDC1YDR182W YFH7P43591 353 aa7.9□□□□□ -1.14
CDC1YDR182W YJL171CP46992 396 aa7.9□□□□□ -1.14
CDC1YDR182W PUS6P53294 404 aa7.89□□□□□ -1.15
CDC1YDR182W PEX29Q03370 554 aa7.89□□□□□ -1.15
CDC1YDR182W MAK21Q12176 1025 aaKnown RBP7.89□□□□□ -1.15
CDC1YDR182W DAL5P15365 543 aa7.88□□□□□ -1.15
CDC1YDR182W SEC18P18759 758 aaKnown RBP7.88□□□□□ -1.15
CDC1YDR182W MOT2P34909 587 aaKnown RBP7.88□□□□□ -1.15
CDC1YDR182W APE3P37302 537 aaKnown RBP7.88□□□□□ -1.15
CDC1YDR182W YMR1P47147 688 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
CDC1YDR182W NCS6P53088 359 aa7.88□□□□□ -1.15
CDC1YDR182W PSF3Q12146 194 aa7.88□□□□□ -1.15
CDC1YDR182W RVB2Q12464 471 aaKnown RBP7.88□□□□□ -1.15
CDC1YDR182W RPS19AP07280 144 aaKnown RBP7.87□□□□□ -1.15
CDC1YDR182W RPS19BP07281 144 aaPredicted RBP7.87□□□□□ -1.15
CDC1YDR182W INM2Q05533 292 aa7.87□□□□□ -1.15
CDC1YDR182W YOR238WQ08634 303 aa7.87□□□□□ -1.15
CDC1YDR182W GAL2P13181 574 aa7.87□□□□□ -1.15
CDC1YDR182W PFK2P16862 959 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
CDC1YDR182W PAM1P37304 830 aaKnown RBP7.87□□□□□ -1.15
CDC1YDR182W GLO3P38682 493 aaKnown RBP7.87□□□□□ -1.15
CDC1YDR182W KEL1P38853 1164 aaKnown RBP7.87□□□□□ -1.15
CDC1YDR182W RBA50Q04418 439 aa7.87□□□□□ -1.15
CDC1YDR182W CDC45Q08032 650 aa7.87□□□□□ -1.15
CDC1YDR182W GYP5Q12344 894 aa7.87□□□□□ -1.15
CDC1YDR182W RRI2Q12348 645 aa7.87□□□□□ -1.15
CDC1YDR182W PTK1P36002 662 aaPredicted RBP7.86□□□□□ -1.15
CDC1YDR182W RSC30P38781 883 aa7.86□□□□□ -1.15
CDC1YDR182W YNL193WP53870 558 aa7.86□□□□□ -1.15
CDC1YDR182W JIP4Q03361 876 aa7.86□□□□□ -1.15
CDC1YDR182W PIB1Q06651 286 aa7.86□□□□□ -1.15
CDC1YDR182W MDL2P33311 773 aa7.85□□□□□ -1.15
CDC1YDR182W YIL092WP40497 633 aa7.85□□□□□ -1.15
CDC1YDR182W RPN7Q06103 429 aaKnown RBP7.85□□□□□ -1.15
CDC1YDR182W MST1P07236 462 aa7.84□□□□□ -1.15
CDC1YDR182W SNF3P10870 884 aa7.84□□□□□ -1.15
CDC1YDR182W DBP1P24784 617 aaKnown RBP7.84□□□□□ -1.15
CDC1YDR182W ASH1P34233 588 aa7.84□□□□□ -1.15
CDC1YDR182W HAL5P38970 855 aaKnown RBP7.84□□□□□ -1.15
CDC1YDR182W APL6P46682 809 aa7.84□□□□□ -1.15
CDC1YDR182W NSG2P53898 299 aa7.84□□□□□ -1.15
CDC1YDR182W GIN4Q12263 1142 aa7.84□□□□□ -1.15
CDC1YDR182W RAD53P22216 821 aa7.83□□□□□ -1.16
CDC1YDR182W STS1P38637 319 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms