RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W YHR219WP38900 624 aa6.35□□□□□ -1.39
HSP42YDR171W RGP1P16664 663 aa6.34□□□□□ -1.39
HSP42YDR171W GBP2P25555 427 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
HSP42YDR171W HXT8P40886 569 aa6.34□□□□□ -1.39
HSP42YDR171W ACF4P47129 309 aa6.34□□□□□ -1.39
HSP42YDR171W SEN54Q02825 467 aaPredicted RBP6.34□□□□□ -1.39
HSP42YDR171W FRT1Q99332 602 aa6.34□□□□□ -1.39
HSP42YDR171W RPC31P17890 251 aa6.33□□□□□ -1.4
HSP42YDR171W SLD2P34252 453 aa6.33□□□□□ -1.4
HSP42YDR171W BSD2P38356 321 aa6.33□□□□□ -1.4
HSP42YDR171W IPL1P38991 367 aa6.33□□□□□ -1.4
HSP42YDR171W STM1P39015 273 aaKnown RBP6.33□□□□□ -1.4
HSP42YDR171W ACO2P39533 789 aa6.33□□□□□ -1.4
HSP42YDR171W CUZ1P53899 274 aa6.33□□□□□ -1.4
HSP42YDR171W CUS1Q02554 436 aaPredicted RBP6.33□□□□□ -1.4
HSP42YDR171W NUT2Q06213 157 aa6.33□□□□□ -1.4
HSP42YDR171W SPA2P23201 1466 aaKnown RBP6.33□□□□□ -1.4
HSP42YDR171W CCP1P00431 361 aa6.32□□□□□ -1.4
HSP42YDR171W NAB2P32505 525 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4 RIP-Chip
HSP42YDR171W SPR3P41901 512 aa6.32□□□□□ -1.4
HSP42YDR171W YMR265CQ03508 461 aaKnown RBP6.32□□□□□ -1.4
HSP42YDR171W DIT1P21623 536 aa6.31□□□□□ -1.4
HSP42YDR171W MSN1P22148 382 aa6.31□□□□□ -1.4
HSP42YDR171W YDL176WQ12027 708 aa6.31□□□□□ -1.4
HSP42YDR171W GIP1P38229 639 aa6.3□□□□□ -1.4
HSP42YDR171W TRS120Q04183 1289 aa6.3□□□□□ -1.4
HSP42YDR171W YOR296WQ08748 1289 aa6.3□□□□□ -1.4
HSP42YDR171W FIR1P40020 876 aa6.29□□□□□ -1.4
HSP42YDR171W KRE33P53914 1056 aaKnown RBP6.29□□□□□ -1.4
HSP42YDR171W MSC6Q08818 692 aaKnown RBP6.29□□□□□ -1.4
HSP42YDR171W ISW1P38144 1129 aa6.28□□□□□ -1.4
HSP42YDR171W RAD55P38953 406 aa6.28□□□□□ -1.4
HSP42YDR171W THI12P42883 340 aa6.28□□□□□ -1.4
HSP42YDR171W THI5P43534 340 aa6.28□□□□□ -1.4
HSP42YDR171W RGD2P43556 714 aa6.28□□□□□ -1.4
HSP42YDR171W THI11P47183 340 aa6.28□□□□□ -1.4
HSP42YDR171W SKP1P52286 194 aa6.28□□□□□ -1.4
HSP42YDR171W YNR040WP53736 256 aa6.28□□□□□ -1.4
HSP42YDR171W UFD2P54860 961 aa6.28□□□□□ -1.4
HSP42YDR171W THI13Q07748 340 aa6.28□□□□□ -1.4
HSP42YDR171W SMC1P32908 1225 aa6.27□□□□□ -1.41
HSP42YDR171W ADE12P80210 433 aaKnown RBP6.27□□□□□ -1.41
HSP42YDR171W WHI5Q12416 295 aa6.27□□□□□ -1.41
HSP42YDR171W SEC20P28791 383 aa6.26□□□□□ -1.41
HSP42YDR171W APM2P38700 605 aa6.26□□□□□ -1.41
HSP42YDR171W CEM1P39525 442 aa6.26□□□□□ -1.41
HSP42YDR171W ITC1P53125 1264 aa6.26□□□□□ -1.41
HSP42YDR171W GPI13Q07830 1017 aa6.26□□□□□ -1.41
HSP42YDR171W TIF6Q12522 245 aaKnown RBP6.26□□□□□ -1.41
HSP42YDR171W FPS1P23900 669 aa6.25□□□□□ -1.41
HSP42YDR171W NCL1P38205 684 aaKnown RBP6.25□□□□□ -1.41
HSP42YDR171W PPX1P38698 397 aa6.25□□□□□ -1.41
HSP42YDR171W MNL2Q12205 849 aa6.25□□□□□ -1.41
HSP42YDR171W NTA1P40354 457 aa6.24□□□□□ -1.41
HSP42YDR171W SGS1P35187 1447 aa6.24□□□□□ -1.41
HSP42YDR171W MSC7P38694 644 aa6.23□□□□□ -1.41
HSP42YDR171W PSY2P40164 858 aa6.23□□□□□ -1.41
HSP42YDR171W EMG1Q06287 252 aaKnown RBP6.23□□□□□ -1.41
HSP42YDR171W SYT1Q06836 1226 aa6.23□□□□□ -1.41
HSP42YDR171W RPP1AP05318 106 aaPredicted RBP6.22□□□□□ -1.41
HSP42YDR171W IRS4P36115 615 aaKnown RBP6.22□□□□□ -1.41
HSP42YDR171W AIM46P38885 310 aa6.22□□□□□ -1.41
HSP42YDR171W YDR461C-AQ2V2P7 80 aa6.22□□□□□ -1.41
HSP42YDR171W MET4P32389 672 aa6.21□□□□□ -1.42
HSP42YDR171W YBR287WP38355 427 aa6.21□□□□□ -1.42
HSP42YDR171W YIL165CP40446 119 aa6.21□□□□□ -1.42
HSP42YDR171W YNL011CP53980 444 aa6.21□□□□□ -1.42
HSP42YDR171W HPF1Q05164 967 aa6.21□□□□□ -1.42
HSP42YDR171W IDI1P15496 288 aa6.2□□□□□ -1.42
HSP42YDR171W HEM3P28789 327 aa6.2□□□□□ -1.42
HSP42YDR171W LYS5P50113 272 aa6.2□□□□□ -1.42
HSP42YDR171W CDC55Q00362 526 aa6.2□□□□□ -1.42
HSP42YDR171W TY1A-DR2Q03964 440 aaKnown RBP6.2□□□□□ -1.42
HSP42YDR171W RSC4Q02206 625 aa6.19□□□□□ -1.42
HSP42YDR171W HEH2Q03281 663 aa6.19□□□□□ -1.42
HSP42YDR171W BSC2Q05611 235 aa6.19□□□□□ -1.42
HSP42YDR171W YGR035CP53222 116 aa6.18□□□□□ -1.42
HSP42YDR171W YER156CP40093 338 aaKnown RBP6.17□□□□□ -1.42
HSP42YDR171W PRK1P40494 810 aa6.17□□□□□ -1.42
HSP42YDR171W YJL181WP46987 611 aa6.17□□□□□ -1.42
HSP42YDR171W POL32P47110 350 aa6.17□□□□□ -1.42
HSP42YDR171W PPT1P53043 513 aa6.17□□□□□ -1.42
HSP42YDR171W MRP10O75012 95 aa6.16□□□□□ -1.42
HSP42YDR171W ATE1P16639 503 aa6.16□□□□□ -1.42
HSP42YDR171W JJJ3P47138 172 aa6.16□□□□□ -1.42
HSP42YDR171W SSN2P38931 1420 aa6.16□□□□□ -1.42
HSP42YDR171W PHO4P07270 312 aaKnown RBP6.15□□□□□ -1.42
HSP42YDR171W YHL008CP38750 627 aa6.15□□□□□ -1.42
HSP42YDR171W CTR9P89105 1077 aa6.15□□□□□ -1.42
HSP42YDR171W RGA2Q06407 1009 aa6.15□□□□□ -1.42
HSP42YDR171W NOC3Q07896 663 aaPredicted RBP6.15□□□□□ -1.42
HSP42YDR171W INP54Q08227 384 aaKnown RBP6.15□□□□□ -1.42
HSP42YDR171W PYC2P32327 1180 aaKnown RBP6.14□□□□□ -1.43
HSP42YDR171W SAM37P50110 327 aa6.14□□□□□ -1.43
HSP42YDR171W YPL062WQ02781 134 aa6.14□□□□□ -1.43
HSP42YDR171W RSC2Q06488 889 aa6.14□□□□□ -1.43
HSP42YDR171W COBP00163 385 aa6.13□□□□□ -1.43
HSP42YDR171W GPM1P00950 247 aaKnown RBP6.13□□□□□ -1.43
HSP42YDR171W RPT1P33299 467 aaKnown RBP6.13□□□□□ -1.43
HSP42YDR171W DAK2P43550 591 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms