RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W YCG1Q06680 1035 aa2.27□□□□□ -2.05
USO1YDL058W SUB2Q07478 446 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W GAS4Q08271 471 aa2.27□□□□□ -2.05
USO1YDL058W APM4Q99186 491 aa2.27□□□□□ -2.05
USO1YDL058W CDC37P06101 506 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W REB1P21538 810 aa2.27□□□□□ -2.05
USO1YDL058W RPN12P32496 274 aa2.27□□□□□ -2.05
USO1YDL058W SMI1P32566 505 aa2.27□□□□□ -2.05
USO1YDL058W MRPL40P36534 297 aa2.27□□□□□ -2.05
USO1YDL058W RKM3P38222 552 aa2.27□□□□□ -2.05
USO1YDL058W RSC30P38781 883 aa2.27□□□□□ -2.05
USO1YDL058W YHR218WP38899 603 aa2.27□□□□□ -2.05
USO1YDL058W PBP1P53297 722 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
USO1YDL058W CSC1Q06538 782 aa2.27□□□□□ -2.05
USO1YDL058W SLK19Q08581 821 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W SEC3P33332 1336 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W GCD1P09032 578 aaPredicted RBP2.27□□□□□ -2.05
USO1YDL058W MRP8P35719 219 aa2.27□□□□□ -2.05
USO1YDL058W HAL5P38970 855 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W YIL055CP40523 627 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W UTP5Q04177 643 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W AOS1Q06624 347 aa2.27□□□□□ -2.05
USO1YDL058W YPR204WQ08995 1032 aa2.27□□□□□ -2.05
USO1YDL058W ICL2Q12031 575 aa2.27□□□□□ -2.05
USO1YDL058W RPN5Q12250 445 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W ATP14Q12349 124 aa2.27□□□□□ -2.05
USO1YDL058W SMY1P32364 656 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W SAC6P32599 642 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W DUG1P43616 481 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W SPO74P45819 413 aa2.27□□□□□ -2.05
USO1YDL058W YKE2P52553 114 aa2.27□□□□□ -2.05
USO1YDL058W LAM6Q08001 693 aa2.27□□□□□ -2.05
USO1YDL058W APL5Q08951 932 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W SMC6Q12749 1114 aa2.27□□□□□ -2.05
USO1YDL058W TMA7Q3E764 64 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W SET1P38827 1080 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W SAP185P40856 1058 aa2.27□□□□□ -2.05
USO1YDL058W BRO1P48582 844 aa2.27□□□□□ -2.05
USO1YDL058W ATG20Q07528 640 aa2.27□□□□□ -2.05
USO1YDL058W BUD21Q08492 214 aaPredicted RBP2.27□□□□□ -2.05
USO1YDL058W MSC6Q08818 692 aaKnown RBP2.27□□□□□ -2.05
USO1YDL058W YLR125WQ12138 136 aa2.27□□□□□ -2.05
USO1YDL058W YLL058WQ12198 575 aa2.27□□□□□ -2.05
USO1YDL058W BRR1Q99177 341 aaPredicted RBP2.27□□□□□ -2.05
USO1YDL058W PBS2P08018 668 aa2.26□□□□□ -2.05
USO1YDL058W ADE2P21264 571 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W MCM3P24279 971 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W RPT3P33298 428 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W GRS1P38088 690 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W SSO2P39926 295 aa2.26□□□□□ -2.05
USO1YDL058W APC5Q08683 685 aa2.26□□□□□ -2.05
USO1YDL058W RVB2Q12464 471 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W KCS1Q12494 1050 aa2.26□□□□□ -2.05
USO1YDL058W SRS2P12954 1174 aa2.26□□□□□ -2.05
USO1YDL058W KIN3P22209 435 aa2.26□□□□□ -2.05
USO1YDL058W DAL80P26343 269 aa2.26□□□□□ -2.05
USO1YDL058W MGM1P32266 881 aa2.26□□□□□ -2.05
USO1YDL058W RRP1P35178 278 aaPredicted RBP2.26□□□□□ -2.05
USO1YDL058W BBC1P47068 1157 aa2.26□□□□□ -2.05
USO1YDL058W SGM1P47166 707 aa2.26□□□□□ -2.05
USO1YDL058W CWC22P53333 577 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W COG6P53959 839 aa2.26□□□□□ -2.05
USO1YDL058W INA17Q02888 182 aa2.26□□□□□ -2.05
USO1YDL058W SHE9Q04172 456 aa2.26□□□□□ -2.05
USO1YDL058W RBA50Q04418 439 aa2.26□□□□□ -2.05
USO1YDL058W DBP9Q06218 594 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W NEW1Q08972 1196 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W CYC8P14922 966 aa2.26□□□□□ -2.05
USO1YDL058W PRP4P20053 465 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W SIT4P20604 311 aa2.26□□□□□ -2.05
USO1YDL058W IME2P32581 645 aa2.26□□□□□ -2.05
USO1YDL058W LEM3P42838 414 aa2.26□□□□□ -2.05
USO1YDL058W RSC8P43609 557 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W YNR061CP53747 219 aa2.26□□□□□ -2.05
USO1YDL058W UBX4P54730 416 aa2.26□□□□□ -2.05
USO1YDL058W RSC4Q02206 625 aa2.26□□□□□ -2.05
USO1YDL058W SGD1Q06132 899 aa2.26□□□□□ -2.05
USO1YDL058W NBP2Q12163 236 aa2.26□□□□□ -2.05
USO1YDL058W TUF1P02992 437 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W THS1P04801 734 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W SIR1P21691 654 aa2.26□□□□□ -2.05
USO1YDL058W TPD3P31383 635 aa2.26□□□□□ -2.05
USO1YDL058W SPT16P32558 1035 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W YRO2P38079 344 aa2.26□□□□□ -2.05
USO1YDL058W TAF5P38129 798 aa2.26□□□□□ -2.05
USO1YDL058W SEC31P38968 1273 aaKnown RBP2.26□□□□□ -2.05
USO1YDL058W RSM25P40496 264 aa2.26□□□□□ -2.05
USO1YDL058W SWC4P53201 476 aa2.26□□□□□ -2.05
USO1YDL058W RKM2Q03942 479 aa2.26□□□□□ -2.05
USO1YDL058W BDF2Q07442 638 aa2.26□□□□□ -2.05
USO1YDL058W GYP5Q12344 894 aa2.26□□□□□ -2.05
USO1YDL058W SAC3P46674 1301 aa2.26□□□□□ -2.05
USO1YDL058W GAL11P19659 1081 aa2.25□□□□□ -2.05
USO1YDL058W YBR238CP38330 731 aaKnown RBP2.25□□□□□ -2.05
USO1YDL058W VHR2P40041 505 aa2.25□□□□□ -2.05
USO1YDL058W LOH1P47055 219 aa2.25□□□□□ -2.05
USO1YDL058W VID30P53076 958 aa2.25□□□□□ -2.05
USO1YDL058W CGR1P53188 120 aa2.25□□□□□ -2.05
USO1YDL058W NAN1Q02931 896 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms