RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C CFT2Q12102 859 aaPredicted RBP6.81□□□□□ -1.32
PAT1YCR077C VPS5Q92331 675 aa6.81□□□□□ -1.32
PAT1YCR077C SPT5P27692 1063 aaKnown RBP6.8□□□□□ -1.32
PAT1YCR077C YBR287WP38355 427 aa6.8□□□□□ -1.32
PAT1YCR077C VPS72Q03388 795 aa6.8□□□□□ -1.32
PAT1YCR077C AIM9P40053 627 aaKnown RBP6.8□□□□□ -1.32
PAT1YCR077C HOS4P40480 1083 aa6.8□□□□□ -1.32
PAT1YCR077C APL6P46682 809 aa6.8□□□□□ -1.32
PAT1YCR077C HGH1P48362 394 aaKnown RBP6.8□□□□□ -1.32
PAT1YCR077C YMR196WQ04336 1088 aa6.8□□□□□ -1.32
PAT1YCR077C SLP1Q12232 587 aa6.8□□□□□ -1.32
PAT1YCR077C COQ4O13525 335 aa6.79□□□□□ -1.32
PAT1YCR077C RPL19AP0CX82 189 aaKnown RBP6.79□□□□□ -1.32
PAT1YCR077C RPL19BP0CX83 189 aaPredicted RBP6.79□□□□□ -1.32
PAT1YCR077C SWH1P35845 1188 aa6.79□□□□□ -1.32
PAT1YCR077C YMR124WP39523 943 aaKnown RBP6.79□□□□□ -1.32
PAT1YCR077C RCF1Q03713 159 aa6.79□□□□□ -1.32
PAT1YCR077C PSR1Q07800 427 aa6.79□□□□□ -1.32
PAT1YCR077C MDM38Q08179 573 aa6.79□□□□□ -1.32
PAT1YCR077C MFT1P33441 392 aaKnown RBP6.79□□□□□ -1.32
PAT1YCR077C TPS3P38426 1054 aaKnown RBP6.79□□□□□ -1.32
PAT1YCR077C YMR1P47147 688 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
PAT1YCR077C GGA1Q06336 557 aa6.79□□□□□ -1.32
PAT1YCR077C ADE6P38972 1358 aaKnown RBP6.79□□□□□ -1.32
PAT1YCR077C SES1P07284 462 aaKnown RBP6.78□□□□□ -1.32
PAT1YCR077C HSC82P15108 705 aaKnown RBP6.78□□□□□ -1.32
PAT1YCR077C LAM1P38851 1228 aa6.78□□□□□ -1.32
PAT1YCR077C SIT1P39980 628 aa6.78□□□□□ -1.32
PAT1YCR077C IMH1Q06704 911 aaKnown RBP6.78□□□□□ -1.32
PAT1YCR077C TRS33Q99394 268 aa6.78□□□□□ -1.32
PAT1YCR077C MRC1P25588 1096 aa6.77□□□□□ -1.32
PAT1YCR077C MSH1P25846 959 aa6.77□□□□□ -1.32
PAT1YCR077C ZUO1P32527 433 aaKnown RBP6.77□□□□□ -1.32
PAT1YCR077C PRX1P34227 261 aaKnown RBP6.77□□□□□ -1.32
PAT1YCR077C YGR122WP53272 402 aa6.77□□□□□ -1.32
PAT1YCR077C MRS2Q01926 470 aa6.77□□□□□ -1.32
PAT1YCR077C RNT1Q02555 471 aa6.77□□□□□ -1.32
PAT1YCR077C ORM2Q06144 216 aa6.77□□□□□ -1.32
PAT1YCR077C NDL1Q06568 189 aa6.77□□□□□ -1.32
PAT1YCR077C YOR389WQ08912 624 aa6.77□□□□□ -1.32
PAT1YCR077C YOL087CQ99247 1116 aa6.77□□□□□ -1.32
PAT1YCR077C DDP1Q99321 188 aaKnown RBP6.77□□□□□ -1.32
PAT1YCR077C TY4B-PA0A0B7P3V8 1104 aa6.77□□□□□ -1.33
PAT1YCR077C AAP1P37898 856 aaKnown RBP6.77□□□□□ -1.33
PAT1YCR077C BRL1P38770 471 aa6.77□□□□□ -1.33
PAT1YCR077C YGL082WP53155 381 aa6.77□□□□□ -1.33
PAT1YCR077C SML1Q04964 104 aa6.77□□□□□ -1.33
PAT1YCR077C URB1P34241 1764 aaKnown RBP6.77□□□□□ -1.33
PAT1YCR077C VPS30Q02948 557 aa6.76□□□□□ -1.33
PAT1YCR077C CEF1Q03654 590 aaPredicted RBP6.76□□□□□ -1.33
PAT1YCR077C PUS1Q12211 544 aaKnown RBP6.76□□□□□ -1.33
PAT1YCR077C MSB4Q12317 492 aa6.76□□□□□ -1.33
PAT1YCR077C PSO2P30620 661 aa6.75□□□□□ -1.33
PAT1YCR077C TTI1P36097 1038 aa6.75□□□□□ -1.33
PAT1YCR077C BOI2P39969 1040 aa6.75□□□□□ -1.33
PAT1YCR077C RIM20Q12033 661 aa6.75□□□□□ -1.33
PAT1YCR077C GCD6P32501 712 aaKnown RBP6.75□□□□□ -1.33
PAT1YCR077C TFG1P41895 735 aaPredicted RBP6.75□□□□□ -1.33
PAT1YCR077C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
PAT1YCR077C PEX14P53112 341 aa6.75□□□□□ -1.33
PAT1YCR077C COG4Q06096 861 aa6.75□□□□□ -1.33
PAT1YCR077C SGD1Q06132 899 aa6.75□□□□□ -1.33
PAT1YCR077C KAR3P17119 729 aa6.74□□□□□ -1.33
PAT1YCR077C YGL140CP53120 1219 aa6.74□□□□□ -1.33
PAT1YCR077C YMR102CQ03177 834 aa6.74□□□□□ -1.33
PAT1YCR077C YOL057WQ08225 711 aa6.74□□□□□ -1.33
PAT1YCR077C RAD3P06839 778 aa6.74□□□□□ -1.33
PAT1YCR077C SEC20P28791 383 aa6.74□□□□□ -1.33
PAT1YCR077C CTH1P47976 325 aa6.74□□□□□ -1.33
PAT1YCR077C CTF18P49956 741 aa6.74□□□□□ -1.33
PAT1YCR077C PXR1P53335 271 aaPredicted RBP6.74□□□□□ -1.33
PAT1YCR077C YPL150WQ12152 901 aa6.74□□□□□ -1.33
PAT1YCR077C CLN1P20437 546 aa6.73□□□□□ -1.33
PAT1YCR077C PRP31P49704 494 aaPredicted RBP6.73□□□□□ -1.33
PAT1YCR077C YDR306CQ06640 478 aa6.73□□□□□ -1.33
PAT1YCR077C GLE1Q12315 538 aa6.73□□□□□ -1.33
PAT1YCR077C YKL068W-AQ3E826 78 aa6.73□□□□□ -1.33
PAT1YCR077C CPA2P03965 1118 aaKnown RBP6.73□□□□□ -1.33
PAT1YCR077C ECM21P38167 1117 aaKnown RBP6.73□□□□□ -1.33
PAT1YCR077C VPS41P38959 992 aa6.73□□□□□ -1.33
PAT1YCR077C ARR1Q06596 294 aa6.73□□□□□ -1.33
PAT1YCR077C GPA1P08539 472 aa6.72□□□□□ -1.33
PAT1YCR077C MRP7P12687 371 aa6.72□□□□□ -1.33
PAT1YCR077C RDS1P25611 832 aa6.72□□□□□ -1.33
PAT1YCR077C NUF2P33895 451 aa6.72□□□□□ -1.33
PAT1YCR077C CLF1Q12309 687 aaPredicted RBP6.72□□□□□ -1.33
PAT1YCR077C KEX2P13134 814 aa6.72□□□□□ -1.33
PAT1YCR077C STE11P23561 717 aa6.72□□□□□ -1.33
PAT1YCR077C SWC3P31376 625 aa6.72□□□□□ -1.33
PAT1YCR077C RTT107P38850 1070 aa6.72□□□□□ -1.33
PAT1YCR077C SSP1P38871 571 aa6.72□□□□□ -1.33
PAT1YCR077C NAB3P38996 802 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PAT1YCR077C MVP1P40959 511 aaKnown RBP6.72□□□□□ -1.33
PAT1YCR077C PKH1Q03407 766 aa6.72□□□□□ -1.33
PAT1YCR077C AOS1Q06624 347 aa6.72□□□□□ -1.33
PAT1YCR077C TLG2Q08144 397 aa6.72□□□□□ -1.33
PAT1YCR077C TSR3Q12094 313 aaKnown RBP6.72□□□□□ -1.33
PAT1YCR077C HSP104P31539 908 aaKnown RBP6.71□□□□□ -1.34
PAT1YCR077C YKR023WP36119 530 aaKnown RBP6.71□□□□□ -1.34
PAT1YCR077C SPO22P40511 975 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms