RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A ADE12P80210 433 aaKnown RBP5.74□□□□□ -1.49
RIM1YCR028C-A GLO3P38682 493 aaKnown RBP5.73□□□□□ -1.49
RIM1YCR028C-A DYS1P38791 387 aa5.72□□□□□ -1.49
RIM1YCR028C-A CEM1P39525 442 aa5.72□□□□□ -1.49
RIM1YCR028C-A QDR1P40475 563 aa5.72□□□□□ -1.49
RIM1YCR028C-A SUT1P53032 299 aaKnown RBP5.72□□□□□ -1.49
RIM1YCR028C-A FPS1P23900 669 aa5.71□□□□□ -1.5
RIM1YCR028C-A CUS1Q02554 436 aaPredicted RBP5.71□□□□□ -1.5
RIM1YCR028C-A YBL113CQ7M4S9 792 aa5.71□□□□□ -1.5
RIM1YCR028C-A TRL1P09880 827 aaKnown RBP5.7□□□□□ -1.5
RIM1YCR028C-A ERP5P38819 212 aa5.7□□□□□ -1.5
RIM1YCR028C-A ICP55P40051 511 aa5.7□□□□□ -1.5
RIM1YCR028C-A LYS5P50113 272 aa5.7□□□□□ -1.5
RIM1YCR028C-A SKP1P52286 194 aa5.7□□□□□ -1.5
RIM1YCR028C-A SYT1Q06836 1226 aa5.7□□□□□ -1.5
RIM1YCR028C-A APC11Q12157 165 aa5.7□□□□□ -1.5
RIM1YCR028C-A RPC31P17890 251 aa5.69□□□□□ -1.5
RIM1YCR028C-A NAB2P32505 525 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
RIM1YCR028C-A MDJ1P35191 511 aa5.69□□□□□ -1.5
RIM1YCR028C-A GRS1P38088 690 aaKnown RBP5.69□□□□□ -1.5
RIM1YCR028C-A FIR1P40020 876 aa5.69□□□□□ -1.5
RIM1YCR028C-A HXT8P40886 569 aa5.69□□□□□ -1.5
RIM1YCR028C-A ATG1P53104 897 aa5.69□□□□□ -1.5
RIM1YCR028C-A YNR040WP53736 256 aa5.69□□□□□ -1.5
RIM1YCR028C-A PUS1Q12211 544 aaKnown RBP5.69□□□□□ -1.5
RIM1YCR028C-A RPP1AP05318 106 aaPredicted RBP5.68□□□□□ -1.5
RIM1YCR028C-A MSN1P22148 382 aa5.68□□□□□ -1.5
RIM1YCR028C-A APM2P38700 605 aa5.68□□□□□ -1.5
RIM1YCR028C-A ACF4P47129 309 aa5.68□□□□□ -1.5
RIM1YCR028C-A YDR461C-AQ2V2P7 80 aa5.68□□□□□ -1.5
RIM1YCR028C-A RPB10P22139 70 aa5.67□□□□□ -1.5
RIM1YCR028C-A NCL1P38205 684 aaKnown RBP5.67□□□□□ -1.5
RIM1YCR028C-A GIP1P38229 639 aa5.67□□□□□ -1.5
RIM1YCR028C-A MDJ2P42834 146 aa5.67□□□□□ -1.5
RIM1YCR028C-A YOR296WQ08748 1289 aa5.67□□□□□ -1.5
RIM1YCR028C-A ISW1P38144 1129 aa5.66□□□□□ -1.5
RIM1YCR028C-A YBR287WP38355 427 aa5.66□□□□□ -1.5
RIM1YCR028C-A BSD2P38356 321 aa5.66□□□□□ -1.5
RIM1YCR028C-A DPH6Q12429 685 aa5.66□□□□□ -1.5
RIM1YCR028C-A SMC1P32908 1225 aa5.65□□□□□ -1.5
RIM1YCR028C-A KTR2P33550 425 aa5.65□□□□□ -1.5
RIM1YCR028C-A SSF1P38789 453 aaPredicted RBP5.65□□□□□ -1.5
RIM1YCR028C-A HEH2Q03281 663 aa5.65□□□□□ -1.5
RIM1YCR028C-A MSC7P38694 644 aa5.64□□□□□ -1.51
RIM1YCR028C-A RGD2P43556 714 aa5.64□□□□□ -1.51
RIM1YCR028C-A ITC1P53125 1264 aa5.64□□□□□ -1.51
RIM1YCR028C-A TY1A-DR2Q03964 440 aaKnown RBP5.64□□□□□ -1.51
RIM1YCR028C-A RAD55P38953 406 aa5.63□□□□□ -1.51
RIM1YCR028C-A YML020WQ03722 664 aa5.63□□□□□ -1.51
RIM1YCR028C-A NTA1P40354 457 aa5.62□□□□□ -1.51
RIM1YCR028C-A YIL165CP40446 119 aa5.62□□□□□ -1.51
RIM1YCR028C-A JJJ3P47138 172 aa5.62□□□□□ -1.51
RIM1YCR028C-A TRS120Q04183 1289 aa5.62□□□□□ -1.51
RIM1YCR028C-A SLD2P34252 453 aa5.61□□□□□ -1.51
RIM1YCR028C-A AIM46P38885 310 aa5.61□□□□□ -1.51
RIM1YCR028C-A STM1P39015 273 aaKnown RBP5.61□□□□□ -1.51
RIM1YCR028C-A NRD1P53617 575 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
RIM1YCR028C-A UFD2P54860 961 aa5.61□□□□□ -1.51
RIM1YCR028C-A EMG1Q06287 252 aaKnown RBP5.61□□□□□ -1.51
RIM1YCR028C-A IRS4P36115 615 aaKnown RBP5.6□□□□□ -1.51
RIM1YCR028C-A YHL050CP38721 697 aa5.6□□□□□ -1.51
RIM1YCR028C-A YHR219WP38900 624 aa5.6□□□□□ -1.51
RIM1YCR028C-A PRK1P40494 810 aa5.6□□□□□ -1.51
RIM1YCR028C-A NUT2Q06213 157 aa5.6□□□□□ -1.51
RIM1YCR028C-A TIF6Q12522 245 aaKnown RBP5.6□□□□□ -1.51
RIM1YCR028C-A PSY2P40164 858 aa5.59□□□□□ -1.51
RIM1YCR028C-A YNL011CP53980 444 aa5.59□□□□□ -1.51
RIM1YCR028C-A MSC6Q08818 692 aaKnown RBP5.59□□□□□ -1.51
RIM1YCR028C-A FRT1Q99332 602 aa5.59□□□□□ -1.51
RIM1YCR028C-A GPM1P00950 247 aaKnown RBP5.58□□□□□ -1.52
RIM1YCR028C-A MNL2Q12205 849 aa5.58□□□□□ -1.52
RIM1YCR028C-A IDI1P15496 288 aa5.57□□□□□ -1.52
RIM1YCR028C-A PDC5P16467 563 aaKnown RBP5.57□□□□□ -1.52
RIM1YCR028C-A YER156CP40093 338 aaKnown RBP5.57□□□□□ -1.52
RIM1YCR028C-A PHM7Q12252 991 aa5.57□□□□□ -1.52
RIM1YCR028C-A MRP10O75012 95 aa5.56□□□□□ -1.52
RIM1YCR028C-A KNS1P32350 737 aaPredicted RBP5.56□□□□□ -1.52
RIM1YCR028C-A YJL181WP46987 611 aa5.56□□□□□ -1.52
RIM1YCR028C-A NSG2P53898 299 aa5.56□□□□□ -1.52
RIM1YCR028C-A RSC4Q02206 625 aa5.56□□□□□ -1.52
RIM1YCR028C-A RSC2Q06488 889 aa5.56□□□□□ -1.52
RIM1YCR028C-A NOP8Q08287 484 aaPredicted RBP5.56□□□□□ -1.52
RIM1YCR028C-A AI1P03875 834 aa5.55□□□□□ -1.52
RIM1YCR028C-A IPL1P38991 367 aa5.55□□□□□ -1.52
RIM1YCR028C-A THI12P42883 340 aa5.55□□□□□ -1.52
RIM1YCR028C-A THI5P43534 340 aa5.55□□□□□ -1.52
RIM1YCR028C-A THI11P47183 340 aa5.55□□□□□ -1.52
RIM1YCR028C-A PPT1P53043 513 aa5.55□□□□□ -1.52
RIM1YCR028C-A SEN54Q02825 467 aaPredicted RBP5.55□□□□□ -1.52
RIM1YCR028C-A THI13Q07748 340 aa5.55□□□□□ -1.52
RIM1YCR028C-A GPI13Q07830 1017 aa5.55□□□□□ -1.52
RIM1YCR028C-A THI72Q08579 599 aa5.55□□□□□ -1.52
RIM1YCR028C-A SEC20P28791 383 aa5.54□□□□□ -1.52
RIM1YCR028C-A CDC55Q00362 526 aa5.53□□□□□ -1.52
RIM1YCR028C-A PYC2P32327 1180 aaKnown RBP5.52□□□□□ -1.53
RIM1YCR028C-A ECM2P38241 364 aaKnown RBP5.52□□□□□ -1.53
RIM1YCR028C-A PPX1P38698 397 aa5.52□□□□□ -1.53
RIM1YCR028C-A INP51P40559 946 aaKnown RBP5.52□□□□□ -1.53
RIM1YCR028C-A SBE2P42223 864 aaKnown RBP5.52□□□□□ -1.53
RIM1YCR028C-A BSC2Q05611 235 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms