RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W VAN1P23642 535 aa8.1□□□□□ -1.11
RER1YCL001W BOI2P39969 1040 aa8.1□□□□□ -1.11
RER1YCL001W HEH2Q03281 663 aa8.1□□□□□ -1.11
RER1YCL001W HSL1P34244 1518 aa8.08□□□□□ -1.12
RER1YCL001W SBP1P10080 294 aaKnown RBP8.07□□□□□ -1.12
RER1YCL001W KAP122P32767 1081 aa8.07□□□□□ -1.12
RER1YCL001W ECM23Q02710 187 aa8.07□□□□□ -1.12
RER1YCL001W TRS33Q99394 268 aa8.06□□□□□ -1.12
RER1YCL001W SPT6P23615 1451 aaKnown RBP8.06□□□□□ -1.12
RER1YCL001W CWH41P53008 833 aa8.05□□□□□ -1.12
RER1YCL001W CUS1Q02554 436 aaPredicted RBP8.05□□□□□ -1.12
RER1YCL001W RPC31P17890 251 aa8.04□□□□□ -1.12
RER1YCL001W YCK2P23292 546 aaKnown RBP8.04□□□□□ -1.12
RER1YCL001W SUV3P32580 737 aa8.04□□□□□ -1.12
RER1YCL001W NCL1P38205 684 aaKnown RBP8.04□□□□□ -1.12
RER1YCL001W YDR215CQ12240 137 aa8.04□□□□□ -1.12
RER1YCL001W CPS1P27614 576 aa8.03□□□□□ -1.12
RER1YCL001W PRK1P40494 810 aa8.03□□□□□ -1.12
RER1YCL001W CAB1Q04430 367 aa8.02□□□□□ -1.13
RER1YCL001W UBX7P38349 436 aa8.01□□□□□ -1.13
RER1YCL001W APM2P38700 605 aa8.01□□□□□ -1.13
RER1YCL001W QDR2P40474 542 aa8.01□□□□□ -1.13
RER1YCL001W PUP1P25043 261 aa8□□□□□ -1.13
RER1YCL001W YNR040WP53736 256 aa7.99□□□□□ -1.13
RER1YCL001W SLN1P39928 1220 aaPredicted RBP7.98□□□□□ -1.13
RER1YCL001W MRPL33P20084 86 aa7.97□□□□□ -1.13
RER1YCL001W PGM2P37012 569 aaKnown RBP7.96□□□□□ -1.14
RER1YCL001W ALG14P38242 237 aa7.96□□□□□ -1.14
RER1YCL001W NHA1Q99271 985 aa7.96□□□□□ -1.14
RER1YCL001W SPA2P23201 1466 aaKnown RBP7.95□□□□□ -1.14
RER1YCL001W VMA3P25515 160 aa7.95□□□□□ -1.14
RER1YCL001W TPS3P38426 1054 aaKnown RBP7.95□□□□□ -1.14
RER1YCL001W FOX2Q02207 900 aaKnown RBP7.95□□□□□ -1.14
RER1YCL001W GIS4Q04233 774 aa7.95□□□□□ -1.14
RER1YCL001W PUF6Q04373 656 aaKnown RBP7.95□□□□□ -1.14
RER1YCL001W YBR197CP38306 217 aa7.94□□□□□ -1.14
RER1YCL001W YOR296WQ08748 1289 aa7.94□□□□□ -1.14
RER1YCL001W NAR1P23503 491 aaKnown RBP7.93□□□□□ -1.14
RER1YCL001W TAT1P38085 619 aa7.93□□□□□ -1.14
RER1YCL001W DYS1P38791 387 aa7.93□□□□□ -1.14
RER1YCL001W ALD4P46367 519 aaKnown RBP7.93□□□□□ -1.14
RER1YCL001W IDI1P15496 288 aa7.92□□□□□ -1.14
RER1YCL001W YER156CP40093 338 aaKnown RBP7.92□□□□□ -1.14
RER1YCL001W PRY1P47032 299 aa7.92□□□□□ -1.14
RER1YCL001W ITC1P53125 1264 aa7.92□□□□□ -1.14
RER1YCL001W NAB2P32505 525 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
RER1YCL001W AMN1P38285 549 aaPredicted RBP7.91□□□□□ -1.14
RER1YCL001W MCA1Q08601 432 aa7.91□□□□□ -1.14
RER1YCL001W HIR3P47171 1648 aa7.91□□□□□ -1.14
RER1YCL001W SSA4P22202 642 aaKnown RBP7.9□□□□□ -1.14
RER1YCL001W PUN1Q06991 263 aa7.9□□□□□ -1.14
RER1YCL001W ISC10P32645 267 aa7.89□□□□□ -1.15
RER1YCL001W LDH1P38139 375 aa7.89□□□□□ -1.15
RER1YCL001W LSB6P42951 607 aa7.89□□□□□ -1.15
RER1YCL001W BUD9P53226 547 aa7.89□□□□□ -1.15
RER1YCL001W MRP10O75012 95 aa7.88□□□□□ -1.15
RER1YCL001W SRS2P12954 1174 aa7.88□□□□□ -1.15
RER1YCL001W GIP1P38229 639 aa7.88□□□□□ -1.15
RER1YCL001W BSD2P38356 321 aa7.88□□□□□ -1.15
RER1YCL001W CWC15Q03772 175 aaKnown RBP7.87□□□□□ -1.15
RER1YCL001W YML083CQ04526 418 aa7.87□□□□□ -1.15
RER1YCL001W NOB1Q08444 459 aaKnown RBP7.87□□□□□ -1.15
RER1YCL001W YPL034WQ03083 165 aa7.85□□□□□ -1.15
RER1YCL001W ISW1P38144 1129 aa7.84□□□□□ -1.15
RER1YCL001W SLP1Q12232 587 aa7.84□□□□□ -1.15
RER1YCL001W AI3P03877 415 aa7.83□□□□□ -1.16
RER1YCL001W RSC2Q06488 889 aa7.83□□□□□ -1.16
RER1YCL001W MSN1P22148 382 aa7.82□□□□□ -1.16
RER1YCL001W THO2P53552 1597 aaKnown RBP7.81□□□□□ -1.16
RER1YCL001W ECM5Q03214 1411 aa7.81□□□□□ -1.16
RER1YCL001W RRM3P38766 723 aa7.81□□□□□ -1.16
RER1YCL001W YIL165CP40446 119 aa7.8□□□□□ -1.16
RER1YCL001W BUD4P47136 1447 aa7.79□□□□□ -1.16
RER1YCL001W SFA1P32771 386 aa7.79□□□□□ -1.16
RER1YCL001W GAS5Q08193 484 aa7.79□□□□□ -1.16
RER1YCL001W SSN2P38931 1420 aa7.78□□□□□ -1.16
RER1YCL001W PNP1Q05788 311 aa7.78□□□□□ -1.16
RER1YCL001W SAC7P17121 654 aa7.77□□□□□ -1.17
RER1YCL001W YBR287WP38355 427 aa7.77□□□□□ -1.17
RER1YCL001W HXT8P40886 569 aa7.77□□□□□ -1.17
RER1YCL001W PPT1P53043 513 aa7.77□□□□□ -1.17
RER1YCL001W XRN1P22147 1528 aaKnown RBP7.77□□□□□ -1.17
RER1YCL001W RRN6P32786 894 aa7.76□□□□□ -1.17
RER1YCL001W PGM1P33401 570 aaKnown RBP7.76□□□□□ -1.17
RER1YCL001W ARI1P53111 347 aaKnown RBP7.76□□□□□ -1.17
RER1YCL001W APC11Q12157 165 aa7.76□□□□□ -1.17
RER1YCL001W TY4B-PA0A0B7P3V8 1104 aa7.75□□□□□ -1.17
RER1YCL001W GIP2P40036 548 aa7.75□□□□□ -1.17
RER1YCL001W TED1P40533 473 aa7.75□□□□□ -1.17
RER1YCL001W EMG1Q06287 252 aaKnown RBP7.75□□□□□ -1.17
RER1YCL001W TY4A-HQ6Q5P6 413 aa7.75□□□□□ -1.17
RER1YCL001W KTR2P33550 425 aa7.74□□□□□ -1.17
RER1YCL001W BOI1P38041 980 aaKnown RBP7.74□□□□□ -1.17
RER1YCL001W FIR1P40020 876 aa7.74□□□□□ -1.17
RER1YCL001W RGD2P43556 714 aa7.73□□□□□ -1.17
RER1YCL001W YJL181WP46987 611 aa7.73□□□□□ -1.17
RER1YCL001W SOK2P53438 785 aaPredicted RBP7.73□□□□□ -1.17
RER1YCL001W GLT1Q12680 2145 aaKnown RBP7.73□□□□□ -1.17
RER1YCL001W MAC1P35192 417 aa7.72□□□□□ -1.17
RER1YCL001W INP51P40559 946 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms