RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C AHP1P38013 176 aaKnown RBP5.03□□□□□ -1.6
SHG1YBR258C STM1P39015 273 aaKnown RBP5.03□□□□□ -1.6
SHG1YBR258C CHD1P32657 1468 aa5.02□□□□□ -1.61
SHG1YBR258C UFD4P33202 1483 aa5.02□□□□□ -1.61
SHG1YBR258C MLF3P32047 452 aa5.02□□□□□ -1.61
SHG1YBR258C IRE1P32361 1115 aa5.02□□□□□ -1.61
SHG1YBR258C ALA1P40825 983 aaKnown RBP5.02□□□□□ -1.61
SHG1YBR258C SPR3P41901 512 aa5.02□□□□□ -1.61
SHG1YBR258C FOX2Q02207 900 aaKnown RBP5.02□□□□□ -1.61
SHG1YBR258C CDC19P00549 500 aaKnown RBP5.01□□□□□ -1.61
SHG1YBR258C LEU1P07264 779 aaKnown RBP5.01□□□□□ -1.61
SHG1YBR258C PDC6P26263 563 aaKnown RBP5.01□□□□□ -1.61
SHG1YBR258C QDR1P40475 563 aa5.01□□□□□ -1.61
SHG1YBR258C UBP15P50101 1230 aa5.01□□□□□ -1.61
SHG1YBR258C UBP2Q01476 1272 aa5.01□□□□□ -1.61
SHG1YBR258C YLR346CQ06139 101 aa5.01□□□□□ -1.61
SHG1YBR258C OPT2Q06593 877 aa5.01□□□□□ -1.61
SHG1YBR258C PSH1Q12161 406 aa5.01□□□□□ -1.61
SHG1YBR258C TCB1Q12466 1186 aa5.01□□□□□ -1.61
SHG1YBR258C SEC20P28791 383 aa5□□□□□ -1.61
SHG1YBR258C GLO3P38682 493 aaKnown RBP5□□□□□ -1.61
SHG1YBR258C PPX1P38698 397 aa5□□□□□ -1.61
SHG1YBR258C ALD2P47771 506 aa5□□□□□ -1.61
SHG1YBR258C LCB5Q06147 687 aaKnown RBP5□□□□□ -1.61
SHG1YBR258C Q0182Q9ZZW1 134 aa5□□□□□ -1.61
SHG1YBR258C RPC31P17890 251 aa4.99□□□□□ -1.61
SHG1YBR258C RPB10P22139 70 aa4.99□□□□□ -1.61
SHG1YBR258C VMA3P25515 160 aa4.99□□□□□ -1.61
SHG1YBR258C GRS1P38088 690 aaKnown RBP4.99□□□□□ -1.61
SHG1YBR258C YTA6P40328 754 aa4.99□□□□□ -1.61
SHG1YBR258C NUT2Q06213 157 aa4.99□□□□□ -1.61
SHG1YBR258C MSC6Q08818 692 aaKnown RBP4.99□□□□□ -1.61
SHG1YBR258C TY1A-BLQ12266 440 aa4.99□□□□□ -1.61
SHG1YBR258C YHL050CP38721 697 aa4.98□□□□□ -1.61
SHG1YBR258C YHR219WP38900 624 aa4.98□□□□□ -1.61
SHG1YBR258C SKP1P52286 194 aa4.98□□□□□ -1.61
SHG1YBR258C UFD2P54860 961 aa4.98□□□□□ -1.61
SHG1YBR258C MET22P32179 357 aa4.97□□□□□ -1.61
SHG1YBR258C KAP122P32767 1081 aa4.97□□□□□ -1.61
SHG1YBR258C OSH7P38755 437 aa4.97□□□□□ -1.61
SHG1YBR258C DYS1P38791 387 aa4.97□□□□□ -1.61
SHG1YBR258C SCW11P53189 542 aa4.97□□□□□ -1.61
SHG1YBR258C TRS120Q04183 1289 aa4.97□□□□□ -1.61
SHG1YBR258C FRT1Q99332 602 aa4.97□□□□□ -1.61
SHG1YBR258C HEM3P28789 327 aa4.96□□□□□ -1.62
SHG1YBR258C LDH1P38139 375 aa4.96□□□□□ -1.62
SHG1YBR258C QDR2P40474 542 aa4.96□□□□□ -1.62
SHG1YBR258C HXT8P40886 569 aa4.96□□□□□ -1.62
SHG1YBR258C MNL2Q12205 849 aa4.96□□□□□ -1.62
SHG1YBR258C RGP1P16664 663 aa4.95□□□□□ -1.62
SHG1YBR258C SMC1P32908 1225 aa4.95□□□□□ -1.62
SHG1YBR258C NAM8Q00539 523 aaKnown RBP4.95□□□□□ -1.62
SHG1YBR258C YDR444WQ04093 687 aa4.95□□□□□ -1.62
SHG1YBR258C YOR296WQ08748 1289 aa4.95□□□□□ -1.62
SHG1YBR258C MSN1P22148 382 aa4.94□□□□□ -1.62
SHG1YBR258C IPL1P38991 367 aa4.94□□□□□ -1.62
SHG1YBR258C RGA1P39083 1007 aa4.94□□□□□ -1.62
SHG1YBR258C ACO2P39533 789 aa4.94□□□□□ -1.62
SHG1YBR258C NTA1P40354 457 aa4.94□□□□□ -1.62
SHG1YBR258C WHI5Q12416 295 aa4.94□□□□□ -1.62
SHG1YBR258C YRF1-1P0CX20 1796 aa4.93□□□□□ -1.62
SHG1YBR258C YRF1-5P0CX21 1796 aa4.93□□□□□ -1.62
SHG1YBR258C YRF1-8P0CX22 1796 aa4.93□□□□□ -1.62
SHG1YBR258C RPP1AP05318 106 aaPredicted RBP4.93□□□□□ -1.62
SHG1YBR258C SUT1P53032 299 aaKnown RBP4.93□□□□□ -1.62
SHG1YBR258C MTO1P53070 669 aa4.93□□□□□ -1.62
SHG1YBR258C CUS1Q02554 436 aaPredicted RBP4.93□□□□□ -1.62
SHG1YBR258C TY1A-MR1Q04215 440 aa4.93□□□□□ -1.62
SHG1YBR258C RRP15Q06511 250 aaPredicted RBP4.93□□□□□ -1.62
SHG1YBR258C GPI13Q07830 1017 aa4.93□□□□□ -1.62
SHG1YBR258C TY1B-BRQ12193 1756 aa4.93□□□□□ -1.62
SHG1YBR258C TY1B-GR3Q12316 1755 aa4.93□□□□□ -1.62
SHG1YBR258C TY1B-ORQ92393 1755 aa4.93□□□□□ -1.62
SHG1YBR258C NTE1Q04958 1679 aa4.92□□□□□ -1.62
SHG1YBR258C CCP1P00431 361 aa4.92□□□□□ -1.62
SHG1YBR258C ASF1P32447 279 aa4.92□□□□□ -1.62
SHG1YBR258C ISW1P38144 1129 aa4.92□□□□□ -1.62
SHG1YBR258C GIP1P38229 639 aa4.92□□□□□ -1.62
SHG1YBR258C RGD2P43556 714 aa4.92□□□□□ -1.62
SHG1YBR258C ROG3P43602 733 aa4.92□□□□□ -1.62
SHG1YBR258C RSC4Q02206 625 aa4.92□□□□□ -1.62
SHG1YBR258C PAN1P32521 1480 aa4.92□□□□□ -1.62
SHG1YBR258C YPK9Q12697 1472 aa4.92□□□□□ -1.62
SHG1YBR258C MET4P32389 672 aa4.91□□□□□ -1.62
SHG1YBR258C BSD2P38356 321 aa4.91□□□□□ -1.62
SHG1YBR258C CDC55Q00362 526 aa4.91□□□□□ -1.62
SHG1YBR258C YDR461C-AQ2V2P7 80 aa4.91□□□□□ -1.62
SHG1YBR258C DIT1P21623 536 aa4.9□□□□□ -1.63
SHG1YBR258C NAB2P32505 525 aaKnown RBP RIP-Chip data4.9□□□□□ -1.63not detected
SHG1YBR258C IRS4P36115 615 aaKnown RBP4.9□□□□□ -1.63
SHG1YBR258C RAD55P38953 406 aa4.9□□□□□ -1.63
SHG1YBR258C YER156CP40093 338 aaKnown RBP4.9□□□□□ -1.63
SHG1YBR258C ITC1P53125 1264 aa4.9□□□□□ -1.63
SHG1YBR258C VPS15P22219 1454 aa4.89□□□□□ -1.63
SHG1YBR258C MRPL16P38064 232 aa4.89□□□□□ -1.63
SHG1YBR258C YBR287WP38355 427 aa4.89□□□□□ -1.63
SHG1YBR258C APM2P38700 605 aa4.89□□□□□ -1.63
SHG1YBR258C FIR1P40020 876 aa4.89□□□□□ -1.63
SHG1YBR258C PSY2P40164 858 aa4.89□□□□□ -1.63
SHG1YBR258C YNL011CP53980 444 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms