RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Myom3A2ABU4 1439 aa12.17□□□□□ -0.46
Scn8a-207ENSMUST00000200959 DccP70211 1447 aa12.15□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Kif20bQ80WE4 1774 aaKnown RBP12.15□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Wnk3Q80XP9 1757 aa12.15□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Ppip5k1A2ARP1 1436 aa12.14□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Map4P27546 1125 aaKnown RBP12.14□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Myom1Q62234 1667 aaKnown RBP12.13□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Sf3b2Q3UJB0 878 aaKnown RBP12.13□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Gm10563F6WIE4 79 aa12.12□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Grwd1Q810D6 446 aaKnown RBP12.12□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Farp2Q91VS8 1065 aa12.12□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Rims1Q99NE5 1463 aa12.11□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Pik3r4Q8VD65 1358 aa12.11□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Nup155Q99P88 1391 aaKnown RBP12.11□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Usp32F8VPZ3 1604 aa12.11□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Fam135bQ9DAI6 1403 aa12.11□□□□□ -0.47
Scn8a-207ENSMUST00000200959 AU022751B1B0V2 589 aa12.1□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Hoxd11P23813 323 aa12.1□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Ezh2Q61188 746 aaKnown RBP12.1□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Ly75Q60767 1723 aa12.09□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Shq1Q7TMX5 569 aa12.09□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Lrrc59Q922Q8 307 aaKnown RBP12.09□□□□□ -0.47
Scn8a-207ENSMUST00000200959 Pik3c2gO70167 1506 aa12.08□□□□□ -0.48
Scn8a-207ENSMUST00000200959 En2P09066 324 aa12.08□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Socs7Q8VHQ2 579 aa12.08□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Cd109Q8R422 1442 aa12.08□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Kcna6Q61923 529 aa12.07□□□□□ -0.48
Scn8a-207ENSMUST00000200959 AatkQ80YE4 1365 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Nsd2Q8BVE8 1365 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Magea1O89006 320 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Magea5O89009 320 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Magea2Q9R2A2 320 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 D430041D05RikF6ZGR6 1678 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Cps1Q8C196 1500 aa12.06□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Ppef1O35655 650 aa12.05□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Zcwpw1Q6IR42 630 aa12.05□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Ttll5Q8CHB8 1328 aa12.04□□□□□ -0.48
Scn8a-207ENSMUST00000200959 PtpruB1AUH1 1446 aa12.03□□□□□ -0.48
Scn8a-207ENSMUST00000200959 ErbinQ80TH2 1402 aa12.03□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Shank2Q80Z38 1476 aa12.03□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Cacna1sQ02789 1880 aa12.02□□□□□ -0.48
Scn8a-207ENSMUST00000200959 Ubxn2bQ0KL01 331 aa12.02□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Ehmt2Q9Z148 1263 aaKnown RBP12.02□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Abca15E9PWH4 1668 aa12.01□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Sox12Q04890 314 aa12.01□□□□□ -0.49
Scn8a-207ENSMUST00000200959 UtrnE9Q6R7 3430 aa12.01□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Atp7bQ64446 1462 aa12.01□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Plekhg1F6S200 1446 aa12□□□□□ -0.49
Scn8a-207ENSMUST00000200959 C5P06684 1680 aa12□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Mast2Q60592 1734 aa11.98□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Kif1aP33173 1695 aa11.98□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Q3UJC8 639 aa11.98□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Clstn2Q9ER65 966 aa11.98□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Atp10bB1AWN4 1474 aa11.97□□□□□ -0.49
Scn8a-207ENSMUST00000200959 NclP09405 707 aaKnown RBP11.97□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Ccdc129Q14B48 1034 aa11.97□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Txnrd1Q9JMH6 613 aa11.97□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Camta1A2A891 1682 aa11.97□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Als2Q920R0 1651 aa11.97□□□□□ -0.49
Scn8a-207ENSMUST00000200959 MaddQ80U28 1577 aa11.96□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Edc4Q3UJB9 1406 aaKnown RBP11.96□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Apba2P98084 750 aa11.96□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Trak1Q6PD31 939 aa11.96□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Fam50aQ9WV03 339 aaKnown RBP11.96□□□□□ -0.49
Scn8a-207ENSMUST00000200959 Fer1l6E0CZ42 1862 aa11.95□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Tmem2Q5FWI3 1383 aa11.95□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Idi1P58044 227 aa11.95□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Sirt1Q923E4 737 aa11.95□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Stk26Q99JT2 416 aa11.95□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Cadps2Q8BYR5 1297 aa11.93□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Nup153E9Q3G8 1462 aaKnown RBP11.93□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Lrp5Q91VN0 1614 aa11.93□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Dhx9O70133 1380 aaKnown RBP11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Plxnc1Q9QZC2 1574 aa11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Nrxn1Q9CS84 1514 aa11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Nfat5Q9WV30 1534 aa11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Gpr150Q8BL07 427 aa11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Cep170bQ80U49 1574 aa11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Mia2Q91ZV0 1396 aa11.92□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Cdhr2E9Q7P9 1308 aa11.91□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Pola1P33609 1465 aa11.91□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Ccdc85cE9Q6B2 420 aa11.91□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Taok3Q8BYC6 898 aa11.9□□□□□ -0.5
Scn8a-207ENSMUST00000200959 NgefQ8CHT1 710 aa11.9□□□□□ -0.5
Scn8a-207ENSMUST00000200959 Utp14aQ640M1 767 aaKnown RBP11.89□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Zmym3Q9JLM4 1370 aa11.89□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Slc35g1Q8BY79 368 aa11.88□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Rfx7F8VPJ6 1459 aa11.88□□□□□ -0.51
Scn8a-207ENSMUST00000200959 UacaQ8CGB3 1411 aa11.87□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Dixdc1Q80Y83 711 aa11.87□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Kcnq2Q9Z351 759 aa11.87□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Wdr17E9Q271 1322 aa11.86□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Acin1Q9JIX8 1338 aaKnown RBP11.86□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Rtl5Q5DTT4 599 aa11.86□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Astn2Q80Z10 1352 aa11.86□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Col16a1Q8BLX7 1580 aa11.85□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Rad23bP54728 416 aa11.84□□□□□ -0.51
Scn8a-207ENSMUST00000200959 Ube2uB1AUC4 352 aa11.82□□□□□ -0.52
Scn8a-207ENSMUST00000200959 Ppp6r1Q7TSI3 856 aa11.82□□□□□ -0.52
Scn8a-207ENSMUST00000200959 Erbb3Q61526 1339 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms