RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gm10563F6WIE4 79 aa13.54□□□□□ -0.24
Ccdc38-201ENSMUST00000092215 Dcaf11Q91VU6 549 aa13.54□□□□□ -0.24
Ccdc38-201ENSMUST00000092215 Rims2Q9EQZ7 1530 aa13.53□□□□□ -0.24
Ccdc38-201ENSMUST00000092215 Gemin5Q8BX17 1502 aaKnown RBP13.52□□□□□ -0.24
Ccdc38-201ENSMUST00000092215 Dip2aQ8BWT5 1523 aa13.52□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Zscan10Q3URR7 782 aa13.52□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Anp32bQ9EST5 272 aaKnown RBP13.51□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Mrs2Q5NCE8 434 aa13.5□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Eif2ak4Q9QZ05 1648 aa13.49□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Slain2Q8CI08 581 aa13.49□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Nop58Q6DFW4 536 aaKnown RBP13.48□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Exoc6Q8R313 802 aa13.48□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Slit3Q9WVB4 1523 aa13.47□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Ap3b2Q9JME5 1082 aa13.47□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Rimbp3Q3V0F0 1606 aa13.47□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Pik3r4Q8VD65 1358 aa13.47□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 InsrP15208 1372 aa13.46□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Scn4aQ9ER60 1841 aa13.46□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 NrdcQ8BHG1 1161 aa13.46□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 FanciQ8K368 1330 aa13.46□□□□□ -0.25
Ccdc38-201ENSMUST00000092215 Plekhg1F6S200 1446 aa13.46□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Smg6P61406 1418 aaKnown RBP13.45□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Kdm5aQ3UXZ9 1690 aa13.45□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Nlrp6Q91WS2 869 aa13.45□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Kif7B7ZNG0 1348 aa13.45□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Idi1P58044 227 aa13.45□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Atf3Q60765 181 aa13.45□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Tns3Q5SSZ5 1440 aa13.44□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Bcl11bQ99PV8 884 aa13.44□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Pola1P33609 1465 aa13.44□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 DnmbpQ6TXD4 1580 aa13.43□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Birc3O08863 600 aa13.42□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 GnpatP98192 678 aa13.42□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Setd1aE9PYH6 1716 aa13.42□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Ecm2Q5FW85 670 aa13.42□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Map3k19E9Q3S4 1311 aa13.41□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Sipa1l1Q8C0T5 1782 aa13.4□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Med1Q925J9 1575 aa13.4□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Sbno1Q689Z5 1390 aa13.4□□□□□ -0.26
Ccdc38-201ENSMUST00000092215 Idi2Q8BFZ6 227 aa13.4□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Kif16bB1AVY7 1312 aa13.39□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 NinlQ6ZQ12 1394 aa13.39□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Abca14E9Q8F8 1683 aa13.39□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Itsn2Q9Z0R6 1659 aa13.39□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Gm16486A0A1D5RMD1 1434 aa13.39□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Nrxn3Q6P9K9 1571 aa13.39□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Ddx17Q501J6 650 aaKnown RBP13.38□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 CatipB9EKE5 520 aa13.37□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Q7TT23 1179 aa13.37□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Rpgrip1lQ8CG73 1264 aa13.37□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Cps1Q8C196 1500 aa13.37□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 MaddQ80U28 1577 aa13.36□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Rreb1Q3UH06 1700 aaKnown RBP13.36□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Fyb1O35601 819 aa13.35□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Amigo3Q8C2S7 508 aa13.35□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Ift172Q6VH22 1749 aa13.35□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Gm21190A0A0G2JGJ6 266 aa13.34□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Ppp2r1aQ76MZ3 589 aa13.34□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Farp2Q91VS8 1065 aa13.34□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Phlpp1Q8CHE4 1687 aa13.34□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Ltbp4Q8K4G1 1666 aa13.34□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Slc35g1Q8BY79 368 aa13.34□□□□□ -0.27
Ccdc38-201ENSMUST00000092215 Cabp4Q8VHC5 271 aa13.33□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Nwd1A6H603 1563 aa13.33□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Pik3c2bE9QAN8 1632 aa13.31□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Lmtk3Q5XJV6 1424 aa13.31□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Sirt1Q923E4 737 aa13.3□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Usp32F8VPZ3 1604 aa13.29□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 NktrP30415 1453 aa13.29□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Slc4a2P13808 1237 aaKnown RBP13.29□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Brinp3Q499E0 766 aa13.29□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Arap3Q8R5G7 1538 aa13.28□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Dennd6aQ8BH65 605 aa13.28□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Frmpd2A0A140LI67 1392 aa13.28□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Rab3gap2Q8BMG7 1366 aa13.28□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Zscan21Q07231 555 aa13.28□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Plin1Q8CGN5 517 aa13.28□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Cald1E9QA15 768 aaKnown RBP13.27□□□□□ -0.28
Ccdc38-201ENSMUST00000092215 Gimap5Q8BWF2 308 aa13.27□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Rad21Q61550 635 aaKnown RBP13.27□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Tcerg1Q8CGF7 1100 aaKnown RBP13.27□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 C3P01027 1663 aa13.27□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Stra8P70278 393 aa13.26□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 PtpruB1AUH1 1446 aa13.26□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Col14a1Q80X19 1797 aa13.26□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 PnisrA2AJT4 805 aaKnown RBP13.26□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Kif20bQ80WE4 1774 aaKnown RBP13.25□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Kcna6Q61923 529 aa13.25□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 U2af1Q9D883 239 aaKnown RBP13.25□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Tmem2Q5FWI3 1383 aa13.25□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Nckap5lQ6GQX2 1323 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Thsd7aQ69ZU6 1645 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Ttll13A4Q9F6 804 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Esx1O88933 382 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Acsbg1Q99PU5 721 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Abcc10Q8R4P9 1501 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Wdr17E9Q271 1322 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 IbtkQ6ZPR6 1352 aaKnown RBP13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Dixdc1Q80Y83 711 aa13.24□□□□□ -0.29
Ccdc38-201ENSMUST00000092215 Tsen2Q6P7W5 460 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms