RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 AU022751B1B0V2 589 aa16.47■□□□□ 0.23
Ccdc60-202ENSMUST00000086483 InhbeO08717 350 aa16.47■□□□□ 0.23
Ccdc60-202ENSMUST00000086483 Farp2Q91VS8 1065 aa16.45■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Arhgef1Q61210 920 aaKnown RBP16.44■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Pik3c2bE9QAN8 1632 aa16.44■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Atp7bQ64446 1462 aa16.44■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Lrrc59Q922Q8 307 aaKnown RBP16.43■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 GnpatP98192 678 aa16.43■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Tnks1bp1P58871 1720 aa16.42■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Sipa1l2Q80TE4 1722 aa16.42■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Gm10563F6WIE4 79 aa16.42■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Ccdc6D3YZP9 469 aa16.41■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Kif1aP33173 1695 aa16.41■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Mia2Q91ZV0 1396 aa16.41■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Ddx17Q501J6 650 aaKnown RBP16.4■□□□□ 0.22
Ccdc60-202ENSMUST00000086483 Ube2uB1AUC4 352 aa16.39■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 D430041D05RikF6ZGR6 1678 aa16.39■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Robo1O89026 1612 aa16.39■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Atp10bB1AWN4 1474 aa16.37■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Camta1A2A891 1682 aa16.37■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Q3UJC8 639 aa16.36■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Smim5Q8BT42 78 aa16.36■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Ddx54Q8K4L0 874 aaKnown RBP16.35■□□□□ 0.21
Ccdc60-202ENSMUST00000086483 Cadps2Q8BYR5 1297 aa16.33■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Eno4Q8C042 619 aa16.33■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 C5P06684 1680 aa16.32■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Slc52a2Q9D8F3 450 aa16.31■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Slc34a2Q9DBP0 697 aa16.31■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Tmem2Q5FWI3 1383 aa16.31■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Pola1P33609 1465 aa16.31■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Usp32F8VPZ3 1604 aa16.31■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Als2Q920R0 1651 aa16.3■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Grwd1Q810D6 446 aaKnown RBP16.29■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 OscarQ8VBT3 265 aa16.29■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Utp14aQ640M1 767 aaKnown RBP16.28■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 VirmaA2AIV2 1811 aaKnown RBP16.28■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Rims1Q99NE5 1463 aa16.28■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Shank2Q80Z38 1476 aa16.27■□□□□ 0.2
Ccdc60-202ENSMUST00000086483 Tnrc6cQ3UHC0 1690 aaKnown RBP16.26■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Mroh3A0A1D5RM54 893 aa16.26■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Acsbg1Q99PU5 721 aa16.26■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Nrxn1Q9CS84 1514 aa16.24■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Nup153E9Q3G8 1462 aaKnown RBP16.24■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Adamtsl1Q8BLI0 1745 aa16.24■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Sirt1Q923E4 737 aa16.24■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Rpgrip1Q9EPQ2 1331 aa16.23■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Sf3b2Q3UJB0 878 aaKnown RBP16.23■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Psrc1Q9D0P7 329 aa16.23■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Plekhg1F6S200 1446 aa16.22■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Abca15E9PWH4 1668 aa16.22■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Sgsm1Q8BPQ7 1093 aa16.21■□□□□ 0.19
Ccdc60-202ENSMUST00000086483 Ltbp1Q8CG19 1712 aa16.2■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Stk26Q99JT2 416 aa16.19■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Dot1lQ6XZL8 1540 aa16.19■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Wdr17E9Q271 1322 aa16.18■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Acin1Q9JIX8 1338 aaKnown RBP16.18■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Mphosph9A6H5Y1 991 aa16.17■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Nfat5Q9WV30 1534 aa16.17■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Idi1P58044 227 aa16.17■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Sugp2Q8CH09 1067 aa16.17■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 ZgpatQ8VDM1 511 aa16.17■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Ly75Q60767 1723 aa16.17■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 UbtfP25976 765 aaKnown RBP16.16■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Kiaa0319Q5SZV5 1081 aa16.16■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Cdhr2E9Q7P9 1308 aa16.16■□□□□ 0.18
Ccdc60-202ENSMUST00000086483 Cep170bQ80U49 1574 aa16.14■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 PtpruB1AUH1 1446 aa16.14■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Polr3aB2RXC6 1390 aa16.14■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Zmym3Q9JLM4 1370 aa16.14■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Sox12Q04890 314 aa16.13■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Ap3b2Q9JME5 1082 aa16.13■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Cacna1sQ02789 1880 aa16.12■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Tulp4Q9JIL5 1547 aa16.12■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Ncapd2Q8K2Z4 1392 aa16.12■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 HdgfP51859 237 aaKnown RBP16.11■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Rtl5Q5DTT4 599 aa16.11■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Lrrc7Q80TE7 1490 aa16.11■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Dixdc1Q80Y83 711 aa16.11■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Srpk2O54781 681 aaKnown RBP16.1■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Washc2Q6PGL7 1334 aa16.1■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Cep152A2AUM9 1736 aaKnown RBP16.1■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Rock1P70335 1354 aa16.09■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Bcl9lQ67FY2 1494 aa16.09■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Ppp6r1Q7TSI3 856 aa16.09■□□□□ 0.17
Ccdc60-202ENSMUST00000086483 Col16a1Q8BLX7 1580 aa16.08■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Puf60Q3UEB3 564 aaKnown RBP16.07■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Apba2P98084 750 aa16.06■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Pkd2O35245 966 aa16.06■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Fan1Q69ZT1 1020 aa16.06■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Ccdc129Q14B48 1034 aa16.05■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Fyb1O35601 819 aa16.04■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Abca14E9Q8F8 1683 aa16.04■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Os9Q8K2C7 672 aa16.04■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Cdk5rap2Q8K389 1822 aa16.03■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Mon2Q80TL7 1715 aa16.03■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Taok3Q8BYC6 898 aa16.03■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Atp2b2Q9R0K7 1198 aa16.03■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 NgefQ8CHT1 710 aa16.02■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Txnrd1Q9JMH6 613 aa16.02■□□□□ 0.16
Ccdc60-202ENSMUST00000086483 Adamts13Q769J6 1426 aa16.02■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms