RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Gm35339A0A140LHH9 1649 aa26.49■■□□□ 1.83
Ccdc60-202ENSMUST00000086483 NischQ80TM9 1593 aa25.76■■□□□ 1.71
Ccdc60-202ENSMUST00000086483 Abcc9P70170 1546 aa25.18■■□□□ 1.62
Ccdc60-202ENSMUST00000086483 Abcc8B2RUS7 1588 aa25.12■■□□□ 1.61
Ccdc60-202ENSMUST00000086483 ScribQ80U72 1612 aa24.58■■□□□ 1.53
Ccdc60-202ENSMUST00000086483 NacadQ5SWP3 1504 aa23.78■■□□□ 1.4
Ccdc60-202ENSMUST00000086483 Kdm5dQ62240 1548 aa23.62■■□□□ 1.37
Ccdc60-202ENSMUST00000086483 Sycp2Q9CUU3 1500 aa23.33■■□□□ 1.33
Ccdc60-202ENSMUST00000086483 Dnajc5bQ9CQ94 199 aa23.26■■□□□ 1.31
Ccdc60-202ENSMUST00000086483 BicraF8VPZ9 1578 aa23.07■■□□□ 1.28
Ccdc60-202ENSMUST00000086483 Dcaf1Q80TR8 1506 aa23.05■■□□□ 1.28
Ccdc60-202ENSMUST00000086483 Thoc2B1AZI6 1594 aaKnown RBP22.69■■□□□ 1.22
Ccdc60-202ENSMUST00000086483 Pds5bQ4VA53 1446 aaKnown RBP22.65■■□□□ 1.22
Ccdc60-202ENSMUST00000086483 Rb1cc1Q9ESK9 1588 aa22.39■■□□□ 1.18
Ccdc60-202ENSMUST00000086483 Atad2bE9Q166 1460 aaKnown RBP22.28■■□□□ 1.16
Ccdc60-202ENSMUST00000086483 Cc2d2aQ8CFW7 1633 aa22.23■■□□□ 1.15
Ccdc60-202ENSMUST00000086483 Crybg2B7ZCC2 1516 aa22.17■■□□□ 1.14
Ccdc60-202ENSMUST00000086483 Ercc6F8VPZ5 1481 aa22.13■■□□□ 1.13
Ccdc60-202ENSMUST00000086483 Ccdc180J3QNE4 1664 aa22.08■■□□□ 1.13
Ccdc60-202ENSMUST00000086483 Baz1aO88379 1555 aa22.07■■□□□ 1.12
Ccdc60-202ENSMUST00000086483 Fam135aQ6NS59 1506 aa22.05■■□□□ 1.12
Ccdc60-202ENSMUST00000086483 Baz1bQ9Z277 1479 aa21.97■■□□□ 1.11
Ccdc60-202ENSMUST00000086483 Smarca2Q6DIC0 1577 aa21.92■■□□□ 1.1
Ccdc60-202ENSMUST00000086483 Dnajc5P60904 198 aa21.85■■□□□ 1.09
Ccdc60-202ENSMUST00000086483 Smarca4Q3TKT4 1613 aaKnown RBP21.82■■□□□ 1.08
Ccdc60-202ENSMUST00000086483 Iqgap2Q3UQ44 1575 aa21.78■■□□□ 1.08
Ccdc60-202ENSMUST00000086483 Zcchc6Q5BLK4 1491 aaKnown RBP21.77■■□□□ 1.08
Ccdc60-202ENSMUST00000086483 Phldb1Q6PDH0 1371 aaKnown RBP21.73■■□□□ 1.07
Ccdc60-202ENSMUST00000086483 Wdr62Q3U3T8 1523 aa21.71■■□□□ 1.07
Ccdc60-202ENSMUST00000086483 Frmpd1A2AKB4 1549 aa21.65■■□□□ 1.06
Ccdc60-202ENSMUST00000086483 Mrc2Q64449 1479 aa21.51■■□□□ 1.03
Ccdc60-202ENSMUST00000086483 Ubl4bQ9CQ84 188 aa21.47■■□□□ 1.03
Ccdc60-202ENSMUST00000086483 Rhox8Q6VSS7 320 aa21.47■■□□□ 1.03
Ccdc60-202ENSMUST00000086483 Cecr2E9Q2Z1 1453 aa21.46■■□□□ 1.03
Ccdc60-202ENSMUST00000086483 Trim41Q5NCC3 630 aa21.33■■□□□ 1
Ccdc60-202ENSMUST00000086483 Unc13aQ4KUS2 1712 aa21.3■■□□□ 1
Ccdc60-202ENSMUST00000086483 Lrriq1Q0P5X1 1673 aa21.05■□□□□ 0.96
Ccdc60-202ENSMUST00000086483 Rsf1E9PWW9 1441 aaKnown RBP21.04■□□□□ 0.96
Ccdc60-202ENSMUST00000086483 Cttnbp2B9EJA2 1648 aa20.96■□□□□ 0.95
Ccdc60-202ENSMUST00000086483 Shroom2A2ALU4 1481 aa20.95■□□□□ 0.94
Ccdc60-202ENSMUST00000086483 CftrP26361 1476 aa20.92■□□□□ 0.94
Ccdc60-202ENSMUST00000086483 Eif4g3Q80XI3 1579 aaKnown RBP20.8■□□□□ 0.92
Ccdc60-202ENSMUST00000086483 Cux2P70298 1426 aa20.78■□□□□ 0.92
Ccdc60-202ENSMUST00000086483 Synj1Q8CHC4 1574 aa20.77■□□□□ 0.92
Ccdc60-202ENSMUST00000086483 Kif21aQ9QXL2 1672 aa20.76■□□□□ 0.91
Ccdc60-202ENSMUST00000086483 Col17a1Q07563 1470 aa20.73■□□□□ 0.91
Ccdc60-202ENSMUST00000086483 Brd4Q9ESU6 1400 aaKnown RBP20.72■□□□□ 0.91
Ccdc60-202ENSMUST00000086483 Kif15Q6P9L6 1387 aa20.63■□□□□ 0.89
Ccdc60-202ENSMUST00000086483 Top2bQ64511 1612 aa20.56■□□□□ 0.88
Ccdc60-202ENSMUST00000086483 Pabpn1Q8CCS6 302 aaKnown RBP20.53■□□□□ 0.88
Ccdc60-202ENSMUST00000086483 Npm1Q61937 292 aaKnown RBP20.51■□□□□ 0.87
Ccdc60-202ENSMUST00000086483 Lamc3Q9R0B6 1581 aa20.5■□□□□ 0.87
Ccdc60-202ENSMUST00000086483 Cep164Q5DU05 1446 aa20.46■□□□□ 0.87
Ccdc60-202ENSMUST00000086483 Zcchc11B2RX14 1644 aaKnown RBP20.44■□□□□ 0.86
Ccdc60-202ENSMUST00000086483 Rtl1Q7M732 1744 aa20.44■□□□□ 0.86
Ccdc60-202ENSMUST00000086483 Urb2E9Q7L1 1524 aaKnown RBP20.42■□□□□ 0.86
Ccdc60-202ENSMUST00000086483 Esf1Q3V1V3 845 aaKnown RBP20.42■□□□□ 0.86
Ccdc60-202ENSMUST00000086483 Plb1Q3TTY0 1478 aa20.37■□□□□ 0.85
Ccdc60-202ENSMUST00000086483 Dhx29Q6PGC1 1365 aaKnown RBP20.3■□□□□ 0.84
Ccdc60-202ENSMUST00000086483 Rusc2Q80U22 1514 aa20.26■□□□□ 0.83
Ccdc60-202ENSMUST00000086483 Pelp1Q9DBD5 1123 aaKnown RBP20.24■□□□□ 0.83
Ccdc60-202ENSMUST00000086483 Crocc2F6XLV1 1638 aa20.22■□□□□ 0.83
Ccdc60-202ENSMUST00000086483 Ift140E9PY46 1464 aa20.22■□□□□ 0.83
Ccdc60-202ENSMUST00000086483 Ccdc18Q640L5 1455 aa20.2■□□□□ 0.82
Ccdc60-202ENSMUST00000086483 LrpprcQ6PB66 1392 aaKnown RBP20.17■□□□□ 0.82
Ccdc60-202ENSMUST00000086483 Ccdc136Q3TVA9 1136 aa20.17■□□□□ 0.82
Ccdc60-202ENSMUST00000086483 Arhgef5E9Q7D5 1581 aa20.13■□□□□ 0.81
Ccdc60-202ENSMUST00000086483 TnnQ80Z71 1560 aa20.08■□□□□ 0.8
Ccdc60-202ENSMUST00000086483 Pcdh10E9PXQ7 1057 aa20.05■□□□□ 0.8
Ccdc60-202ENSMUST00000086483 Camsap1A2AHC3 1581 aa20.03■□□□□ 0.8
Ccdc60-202ENSMUST00000086483 Adgrl3Q80TS3 1537 aa20.03■□□□□ 0.8
Ccdc60-202ENSMUST00000086483 PogzQ8BZH4 1409 aaKnown RBP20.01■□□□□ 0.79
Ccdc60-202ENSMUST00000086483 Il27Q8K3I6 234 aa20.01■□□□□ 0.79
Ccdc60-202ENSMUST00000086483 Pbrm1Q8BSQ9 1634 aaKnown RBP19.92■□□□□ 0.78
Ccdc60-202ENSMUST00000086483 Cc2d2bA0A286YDU8 1405 aa19.92■□□□□ 0.78
Ccdc60-202ENSMUST00000086483 PtprkP35822 1457 aa19.91■□□□□ 0.78
Ccdc60-202ENSMUST00000086483 Golga3P55937 1487 aa19.91■□□□□ 0.78
Ccdc60-202ENSMUST00000086483 Disp1Q3TDN0 1521 aa19.9■□□□□ 0.78
Ccdc60-202ENSMUST00000086483 Ttbk1Q6PCN3 1308 aa19.9■□□□□ 0.78
Ccdc60-202ENSMUST00000086483 Cep170Q6A065 1588 aa19.87■□□□□ 0.77
Ccdc60-202ENSMUST00000086483 Duox2A2AQ99 1517 aa19.87■□□□□ 0.77
Ccdc60-202ENSMUST00000086483 Nup160Q9Z0W3 1402 aaKnown RBP19.87■□□□□ 0.77
Ccdc60-202ENSMUST00000086483 PtprtQ99M80 1454 aa19.86■□□□□ 0.77
Ccdc60-202ENSMUST00000086483 Gapvd1Q6PAR5 1458 aa19.82■□□□□ 0.76
Ccdc60-202ENSMUST00000086483 Gm156Q58A37 223 aa19.81■□□□□ 0.76
Ccdc60-202ENSMUST00000086483 Fgd6Q69ZL1 1399 aa19.78■□□□□ 0.76
Ccdc60-202ENSMUST00000086483 Setd1bQ8CFT2 1985 aa19.75■□□□□ 0.75
Ccdc60-202ENSMUST00000086483 AqrQ8CFQ3 1481 aaKnown RBP19.72■□□□□ 0.75
Ccdc60-202ENSMUST00000086483 Grin2bQ01097 1482 aa19.7■□□□□ 0.74
Ccdc60-202ENSMUST00000086483 Samd9lQ69Z37 1561 aa19.69■□□□□ 0.74
Ccdc60-202ENSMUST00000086483 Fmn1Q05860 1466 aa19.66■□□□□ 0.74
Ccdc60-202ENSMUST00000086483 Pprc1Q6NZN1 1644 aa19.65■□□□□ 0.74
Ccdc60-202ENSMUST00000086483 Efcab5A0JP43 1406 aa19.64■□□□□ 0.73
Ccdc60-202ENSMUST00000086483 Abcc1O35379 1528 aa19.6■□□□□ 0.73
Ccdc60-202ENSMUST00000086483 Grin2aP35436 1464 aa19.6■□□□□ 0.73
Ccdc60-202ENSMUST00000086483 Rapgef2Q8CHG7 1496 aa19.57■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 Ythdc2B2RR83 1445 aaKnown RBP19.56■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 Magi3Q9EQJ9 1476 aa19.56■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 CadpsQ80TJ1 1355 aa19.55■□□□□ 0.72
Ccdc60-202ENSMUST00000086483 Gpatch8A2A6A1 1505 aa19.55■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms