RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W RPL30P14120 105 aaKnown RBP3.96□□□□□ -1.78
ABF1YKL112W COX13P32799 129 aa3.96□□□□□ -1.78
ABF1YKL112W YKL102CP34249 101 aa3.96□□□□□ -1.78
ABF1YKL112W RPL32P38061 130 aaKnown RBP3.96□□□□□ -1.78
ABF1YKL112W YHR140WP38842 239 aa3.96□□□□□ -1.78
ABF1YKL112W MST27P53176 234 aa3.96□□□□□ -1.78
ABF1YKL112W RCE1Q03530 315 aa3.96□□□□□ -1.78
ABF1YKL112W HRT1Q08273 121 aa3.96□□□□□ -1.78
ABF1YKL112W RPS10AQ08745 105 aaPredicted RBP3.96□□□□□ -1.78
ABF1YKL112W CYR1P08678 2026 aaKnown RBP3.96□□□□□ -1.78
ABF1YKL112W MIG1P27705 504 aa3.96□□□□□ -1.78
ABF1YKL112W YSC84P32793 468 aa3.96□□□□□ -1.78
ABF1YKL112W TMA19P35691 167 aaKnown RBP3.96□□□□□ -1.78
ABF1YKL112W YFL065CP43539 102 aa3.96□□□□□ -1.78
ABF1YKL112W YFR045WP43617 309 aa3.96□□□□□ -1.78
ABF1YKL112W ARP3P47117 449 aaKnown RBP3.96□□□□□ -1.78
ABF1YKL112W UBP8P50102 471 aa3.96□□□□□ -1.78
ABF1YKL112W GAS3Q03655 524 aa3.96□□□□□ -1.78
ABF1YKL112W YPR098CQ06089 161 aa3.96□□□□□ -1.78
ABF1YKL112W ASA1Q06822 443 aa3.96□□□□□ -1.78
ABF1YKL112W YPR203WQ08994 102 aa3.96□□□□□ -1.78
ABF1YKL112W YPL245WQ12179 454 aaKnown RBP3.96□□□□□ -1.78
ABF1YKL112W YNR034W-AQ3E841 98 aa3.96□□□□□ -1.78
ABF1YKL112W ARF1P11076 181 aaKnown RBP3.95□□□□□ -1.78
ABF1YKL112W NNK1P36003 928 aa3.95□□□□□ -1.78
ABF1YKL112W YBR063CP38083 404 aa3.95□□□□□ -1.78
ABF1YKL112W SDS24P38314 527 aa3.95□□□□□ -1.78
ABF1YKL112W MST28P39552 234 aa3.95□□□□□ -1.78
ABF1YKL112W BAT2P47176 376 aaKnown RBP3.95□□□□□ -1.78
ABF1YKL112W YNL033WP53964 284 aa3.95□□□□□ -1.78
ABF1YKL112W YNL019CP53975 284 aa3.95□□□□□ -1.78
ABF1YKL112W TRS23Q03784 219 aa3.95□□□□□ -1.78
ABF1YKL112W YMR082CQ04276 118 aa3.95□□□□□ -1.78
ABF1YKL112W LOA1Q06508 300 aa3.95□□□□□ -1.78
ABF1YKL112W MET32Q12041 191 aa3.95□□□□□ -1.78
ABF1YKL112W YPR064WQ12492 139 aa3.95□□□□□ -1.78
ABF1YKL112W YPR145C-AQ2V2P0 78 aa3.95□□□□□ -1.78
ABF1YKL112W YPL119C-AQ3E751 87 aa3.95□□□□□ -1.78
ABF1YKL112W RPB3P16370 318 aaKnown RBP3.95□□□□□ -1.78
ABF1YKL112W ATG8P38182 117 aaRIP-Chip data3.95□□□□□ -1.78not detected
ABF1YKL112W TIM17P39515 158 aa3.95□□□□□ -1.78
ABF1YKL112W SYS1P41544 203 aa3.95□□□□□ -1.78
ABF1YKL112W CUP9P41817 306 aa3.95□□□□□ -1.78
ABF1YKL112W NUP100Q02629 959 aa3.95□□□□□ -1.78
ABF1YKL112W DGA1Q08650 418 aa3.95□□□□□ -1.78
ABF1YKL112W PRM3Q08931 133 aa3.95□□□□□ -1.78
ABF1YKL112W CPA1P07258 411 aaKnown RBP3.94□□□□□ -1.78
ABF1YKL112W MSI1P13712 422 aa3.94□□□□□ -1.78
ABF1YKL112W TFS1P14306 219 aa3.94□□□□□ -1.78
ABF1YKL112W CDC43P18898 376 aa3.94□□□□□ -1.78
ABF1YKL112W CTF8P38877 133 aa3.94□□□□□ -1.78
ABF1YKL112W SWM2P40342 146 aa3.94□□□□□ -1.78
ABF1YKL112W AVT7P40501 490 aa3.94□□□□□ -1.78
ABF1YKL112W CAT5P41735 233 aa3.94□□□□□ -1.78
ABF1YKL112W YGL260WP53056 76 aa3.94□□□□□ -1.78
ABF1YKL112W ERG26P53199 349 aaKnown RBP3.94□□□□□ -1.78
ABF1YKL112W THG1P53215 237 aaKnown RBP3.94□□□□□ -1.78
ABF1YKL112W SCW4P53334 386 aaKnown RBP3.94□□□□□ -1.78
ABF1YKL112W YLR224WQ05947 369 aa3.94□□□□□ -1.78
ABF1YKL112W KEI1Q06346 221 aa3.94□□□□□ -1.78
ABF1YKL112W YOL160WQ08321 113 aa3.94□□□□□ -1.78
ABF1YKL112W FIT3Q08907 204 aa3.94□□□□□ -1.78
ABF1YKL112W YER175W-AQ8TGU4 54 aa3.94□□□□□ -1.78
ABF1YKL112W RAD6P06104 172 aa3.93□□□□□ -1.78
ABF1YKL112W MRS3P10566 314 aa3.93□□□□□ -1.78
ABF1YKL112W VMA11P32842 164 aa3.93□□□□□ -1.78
ABF1YKL112W ATG18P43601 500 aa3.93□□□□□ -1.78
ABF1YKL112W GEP7P53171 287 aa3.93□□□□□ -1.78
ABF1YKL112W SMM1P53720 384 aaKnown RBP3.93□□□□□ -1.78
ABF1YKL112W CYT2Q00873 224 aa3.93□□□□□ -1.78
ABF1YKL112W NAT5Q08689 176 aa3.93□□□□□ -1.78
ABF1YKL112W YDR029WQ12111 104 aa3.93□□□□□ -1.78
ABF1YKL112W RFM1Q12192 310 aa3.93□□□□□ -1.78
ABF1YKL112W NCE102Q12207 173 aaRIP-Chip data3.93□□□□□ -1.78not detected
ABF1YKL112W FAS1P07149 2051 aaKnown RBP3.93□□□□□ -1.78
ABF1YKL112W MBF1O14467 151 aaKnown RBP3.93□□□□□ -1.78
ABF1YKL112W SPO13P23624 291 aa3.93□□□□□ -1.78
ABF1YKL112W SRP21P32342 167 aa3.93□□□□□ -1.78
ABF1YKL112W RPL14AP36105 138 aaKnown RBP3.93□□□□□ -1.78
ABF1YKL112W PDX3P38075 228 aaKnown RBP3.93□□□□□ -1.78
ABF1YKL112W YPL162CQ12042 273 aa3.93□□□□□ -1.78
ABF1YKL112W TIR4Q12218 487 aaPredicted RBP3.93□□□□□ -1.78
ABF1YKL112W YPL229WQ99395 206 aa3.93□□□□□ -1.78
ABF1YKL112W AQY1P0CD91 305 aa3.92□□□□□ -1.78
ABF1YKL112W ALK2P32789 676 aaPredicted RBP3.92□□□□□ -1.78
ABF1YKL112W SPT4P32914 102 aaPredicted RBP3.92□□□□□ -1.78
ABF1YKL112W YAR029WP39549 74 aa3.92□□□□□ -1.78
ABF1YKL112W YIA6P40556 373 aa3.92□□□□□ -1.78
ABF1YKL112W SMD3P43321 101 aaKnown RBP3.92□□□□□ -1.78
ABF1YKL112W FIP1P45976 327 aa3.92□□□□□ -1.78
ABF1YKL112W YPS5P53057 165 aa3.92□□□□□ -1.78
ABF1YKL112W EMC4P53073 190 aa3.92□□□□□ -1.78
ABF1YKL112W SPR6Q01684 191 aa3.92□□□□□ -1.78
ABF1YKL112W RNQ1P25367 405 aa3.92□□□□□ -1.78
ABF1YKL112W GEP4P38812 185 aa3.92□□□□□ -1.78
ABF1YKL112W SPO73P40031 143 aa3.92□□□□□ -1.78
ABF1YKL112W YER134CP40081 178 aa3.92□□□□□ -1.78
ABF1YKL112W CWP2P43497 92 aa3.92□□□□□ -1.78
ABF1YKL112W BUD25P85052 153 aa3.92□□□□□ -1.78
ABF1YKL112W VPS68Q12016 184 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms