RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	AEP3	Q12089	606 aa		0.63	□□□□□ -2.31
PAM16	YJL104W	SPC3	Q12133	184 aa		0.63	□□□□□ -2.31
PAM16	YJL104W	MPD1	Q12404	318 aa	Known RBP	0.63	□□□□□ -2.31
PAM16	YJL104W	ATG31	Q12421	196 aa		0.63	□□□□□ -2.31
PAM16	YJL104W	ISA2	Q12425	185 aa		0.63	□□□□□ -2.31
PAM16	YJL104W	HUT1	Q12520	339 aa		0.63	□□□□□ -2.31
PAM16	YJL104W	YLR307C-A	Q3E825	87 aa		0.63	□□□□□ -2.31
PAM16	YJL104W	CDC7	P06243	507 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	CBF1	P17106	351 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	PHO80	P20052	293 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	SEC22	P22214	214 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	MRS4	P23500	304 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	PRE7	P23724	241 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	RFA3	P26755	122 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	MSK1	P32048	576 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	RPB7	P34087	171 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	COS8	P38723	381 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	LSM12	P38828	187 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	ASP1	P38986	381 aa	Predicted RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	MBB1	P39534	108 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	EFM4	P40516	257 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	YRB2	P40517	327 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	SAS2	P40963	338 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	RPS29B	P41058	56 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	YJL118W	P47022	219 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	IMD4	P50094	524 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	MIG2	P53035	382 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	NIF3	P53081	288 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	MRM2	P53123	320 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	YGR219W	P53307	113 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	SWT21	P53873	357 aa	Predicted RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	FMP41	P53889	259 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	SNA2	P56508	79 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	HHT1	P61830	136 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	ERI1	P62651	68 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	VTI1	Q04338	217 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	LOA1	Q06508	300 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	RAD28	Q12021	506 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	YPR063C	Q12160	140 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	PAA1	Q12447	191 aa	Known RBP	0.62	□□□□□ -2.31
PAM16	YJL104W	ISN1	Q99312	450 aa		0.62	□□□□□ -2.31
PAM16	YJL104W	MRP1	P10662	321 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
PAM16	YJL104W	SPO13	P23624	291 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	RRP7	P25368	297 aa	Predicted RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	CSM1	P25651	190 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	NTG1	P31378	399 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	RPL14A	P36105	138 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	ATP3	P38077	311 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	YBL071C	P38185	102 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	MED8	P38304	223 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	RPL14B	P38754	138 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	SNU13	P39990	126 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	THO1	P40040	218 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	CCS1	P40202	249 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	LST8	P41318	303 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	HAC1	P41546	238 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	GPI2	P46961	280 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	YGL185C	P53100	379 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	YGR042W	P53227	271 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	SAY1	P53324	424 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	ALG9	P53868	555 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	PGA1	P53896	198 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	GIM3	P53900	129 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	EOS1	P53938	366 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	SNO1	Q03144	224 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	SNZ1	Q03148	297 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	THI74	Q04083	370 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	SDH7	Q04401	133 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	YDR286C	Q05530	114 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	RNH202	Q05635	350 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	ATG17	Q06410	417 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	TSR2	Q06672	205 aa	Known RBP	0.61	□□□□□ -2.31
PAM16	YJL104W	YLR413W	Q06689	675 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	NCA2	Q12374	616 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	YPR1	Q12458	312 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	PCL9	Q12477	304 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	PRM4	Q12498	284 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	YGR240C-A	Q3E786	66 aa		0.61	□□□□□ -2.31
PAM16	YJL104W	YLL053C	P0CD98	152 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	YMR31	P19955	123 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	RPL16B	P26785	198 aa	Known RBP	0.6	□□□□□ -2.31
PAM16	YJL104W	PEX4	P29340	183 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	FUN26	P31381	517 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	VMA8	P32610	256 aa	Known RBP	0.6	□□□□□ -2.31
PAM16	YJL104W	MRPL6	P32904	214 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	SNC2	P33328	115 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	RRF1	P38771	230 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	MTW1	P39731	289 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	GLE2	P40066	365 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	YER135C	P40082	130 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	KEG1	P43614	200 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	TMA22	P47089	198 aa	Predicted RBP	0.6	□□□□□ -2.31
PAM16	YJL104W	SUB1	P54000	292 aa	Known RBP	0.6	□□□□□ -2.31
PAM16	YJL104W	MEH1	Q02205	184 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	YMD8	Q03697	442 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	HNT1	Q04344	158 aa	Known RBP	0.6	□□□□□ -2.31
PAM16	YJL104W	SML1	Q04964	104 aa		0.6	□□□□□ -2.31
PAM16	YJL104W	FCF1	Q05498	189 aa	Predicted RBP	0.6	□□□□□ -2.31
PAM16	YJL104W	YOL131W	Q08270	108 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms