RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	RIM9	Q04734	239 aa		0.89	□□□□□ -2.27
YCS4	YLR272C	USO1	P25386	1790 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	MBF1	O14467	151 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	MRPL28	P36527	147 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	YHR125W	P38831	101 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	RPL9A	P05738	191 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	PET54	P10834	293 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	BMH1	P29311	267 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	ATP7	P30902	174 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	AEP1	P32493	518 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	FIG1	P38224	298 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	EDC3	P39998	551 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	VTC1	P40046	129 aa	RIP-Chip data	0.88	□□□□□ -2.27	not detected
YCS4	YLR272C	SYS1	P41544	203 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	UFE1	P41834	346 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	YJR111C	P47148	283 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	RPL9B	P51401	191 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	YNR062C	P53748	327 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	ABP140	Q08641	628 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	YAL063C-A	Q3E791	96 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	SAS5	Q99314	248 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	RSF2	P46974	1380 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	FLO9	P39712	1322 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	KRE5	P22023	1365 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	CPA1	P07258	411 aa	Known RBP	0.88	□□□□□ -2.27
YCS4	YLR272C	YLR156W	P0CE96	114 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	YLR159W	P0CE97	114 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	YLR161W	P0CE98	114 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	ECM13	P38195	257 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	DER1	P38307	211 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	PEX17	P40155	199 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	YPI1	P43587	155 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	SNX4	P47057	423 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	SDT1	P53078	280 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	AAH1	P53909	347 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	OSH6	Q02201	448 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	IES4	Q08561	116 aa		0.88	□□□□□ -2.27
YCS4	YLR272C	YPR096C	O13587	100 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	CMD1	P06787	147 aa	Known RBP	0.87	□□□□□ -2.27
YCS4	YLR272C	RPB5	P20434	215 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	FMT1	P32785	401 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	TIP20	P33891	701 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	MGA1	P53050	456 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	VPS28	Q02767	242 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	YOR020W-A	Q3E824	90 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	FKS3	Q04952	1785 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	UBR1	P19812	1950 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	MSW1	P04803	379 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	EFM1	P38732	585 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	RPC17	P47076	161 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	RPM2	Q02773	1202 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	PEX12	Q04370	399 aa		0.87	□□□□□ -2.27
YCS4	YLR272C	RPN8	Q08723	338 aa	Known RBP	0.87	□□□□□ -2.27
YCS4	YLR272C	TIM9	O74700	87 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	HSP30	P25619	332 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	NTF2	P33331	125 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	YKL187C	P34231	750 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	HMF1	P40037	129 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	PRE5	P40302	234 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	TIM13	P53299	105 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	PDR17	P53844	350 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	DIA1	P54005	336 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	TRM44	Q02648	567 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	LPP1	Q04396	274 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	YDR278C	Q05612	105 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	COQ10	Q08058	207 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	QCR7	P00128	127 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	TRR1	P29509	319 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	ARC19	P33204	171 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	TAF14	P35189	244 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	TRM7	P38238	310 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	ARC15	P40518	154 aa	RIP-Chip data	0.86	□□□□□ -2.27	not detected
YCS4	YLR272C	GSC2	P40989	1895 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	ARO8	P53090	500 aa	Known RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	YGR067C	P53243	804 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	PIR1	Q03178	341 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	GRX3	Q03835	250 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	SHH4	Q06236	168 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	RIF1	P29539	1916 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	KDX1	P36005	433 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	AME1	P38313	324 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	SUR2	P38992	349 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	SYC1	Q08553	188 aa	Predicted RBP	0.86	□□□□□ -2.27
YCS4	YLR272C	TRM10	Q12400	293 aa		0.86	□□□□□ -2.27
YCS4	YLR272C	UBC6	P33296	250 aa	Predicted RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	AIF1	P52923	378 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	SRL4	Q03085	281 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	YMR295C	Q03559	197 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	FYV12	Q08559	129 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	NIP7	Q08962	181 aa	Known RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	YPR063C	Q12160	140 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	YPL247C	Q12523	523 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	UTP10	P42945	1769 aa	Known RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	RPS23A	P0CX29	145 aa	Known RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	RPS23B	P0CX30	145 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
YCS4	YLR272C	CDC40	P40968	455 aa	Predicted RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	YOR186W	Q08560	144 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	YHR086W-A	Q3E746	53 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	FIG2	P25653	1609 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 52 ms