RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeastyeast

Gene GPN3, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPN3YLR243W VAR1P02381 398 aa1.36□□□□□ -2.19
GPN3YLR243W CDC33P07260 213 aaKnown RBP1.36□□□□□ -2.19
GPN3YLR243W NHP6BP11633 99 aaKnown RBP1.36□□□□□ -2.19
GPN3YLR243W BET1P22804 142 aa1.36□□□□□ -2.19
GPN3YLR243W SPS18P32572 300 aa1.36□□□□□ -2.19
GPN3YLR243W YBR285WP38354 144 aa1.36□□□□□ -2.19
GPN3YLR243W RMD6P39975 231 aa1.36□□□□□ -2.19
GPN3YLR243W CUS2P53830 285 aaPredicted RBP1.36□□□□□ -2.19
GPN3YLR243W PDR17P53844 350 aa1.36□□□□□ -2.19
GPN3YLR243W RNH1Q04740 348 aa1.36□□□□□ -2.19
GPN3YLR243W SMD2Q06217 110 aaKnown RBP1.36□□□□□ -2.19
GPN3YLR243W YNG1Q08465 219 aa1.36□□□□□ -2.19
GPN3YLR243W FAS1P07149 2051 aaKnown RBP1.36□□□□□ -2.19
GPN3YLR243W GCN3P14741 305 aa1.35□□□□□ -2.19
GPN3YLR243W RPB3P16370 318 aaKnown RBP1.35□□□□□ -2.19
GPN3YLR243W MGM101P32787 269 aaKnown RBP1.35□□□□□ -2.19
GPN3YLR243W PRP18P33411 251 aaPredicted RBP1.35□□□□□ -2.19
GPN3YLR243W TVP38P36164 337 aa1.35□□□□□ -2.19
GPN3YLR243W YBR209WP38311 105 aa1.35□□□□□ -2.19
GPN3YLR243W RPL27AP0C2H6 136 aaKnown RBP1.34□□□□□ -2.19
GPN3YLR243W URA5P13298 226 aaKnown RBP1.34□□□□□ -2.19
GPN3YLR243W RME1P32338 300 aaKnown RBP1.34□□□□□ -2.19
GPN3YLR243W MSS2P40990 351 aa1.34□□□□□ -2.19
GPN3YLR243W YRB1P41920 201 aaKnown RBP1.34□□□□□ -2.19
GPN3YLR243W YOL160WQ08321 113 aa1.34□□□□□ -2.19
GPN3YLR243W RUD3Q12234 484 aaKnown RBP1.34□□□□□ -2.19
GPN3YLR243W YNL146C-AQ3E7Z1 64 aa1.34□□□□□ -2.19
GPN3YLR243W SAC3P46674 1301 aa1.34□□□□□ -2.2
GPN3YLR243W SEC11P15367 167 aa1.33□□□□□ -2.2
GPN3YLR243W ARC19P33204 171 aaKnown RBP1.33□□□□□ -2.2
GPN3YLR243W TAF14P35189 244 aa1.33□□□□□ -2.2
GPN3YLR243W SHE2P36068 246 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
GPN3YLR243W YER034WP40022 185 aaKnown RBP1.33□□□□□ -2.2
GPN3YLR243W RIO2P40160 425 aaKnown RBP1.33□□□□□ -2.2
GPN3YLR243W MPC3P53311 146 aa1.33□□□□□ -2.2
GPN3YLR243W LSM7P53905 115 aaKnown RBP1.33□□□□□ -2.2
GPN3YLR243W RAD28Q12021 506 aa1.33□□□□□ -2.2
GPN3YLR243W YDL180WQ12301 547 aa1.33□□□□□ -2.2
GPN3YLR243W MER1P16523 270 aa1.32□□□□□ -2.2
GPN3YLR243W STE18P18852 110 aa1.32□□□□□ -2.2
GPN3YLR243W COQ1P18900 473 aa1.32□□□□□ -2.2
GPN3YLR243W COG5P53951 403 aa1.32□□□□□ -2.2
GPN3YLR243W IRC18P47056 224 aa1.31□□□□□ -2.2
GPN3YLR243W ATG38Q05789 226 aaKnown RBP1.31□□□□□ -2.2
GPN3YLR243W GIS3Q12418 502 aa1.31□□□□□ -2.2
GPN3YLR243W RPB4P20433 221 aaPredicted RBP1.3□□□□□ -2.2
GPN3YLR243W ASF2P32448 525 aaPredicted RBP1.3□□□□□ -2.2
GPN3YLR243W ACP1P32463 125 aa1.3□□□□□ -2.2
GPN3YLR243W OPY1P38271 328 aa1.3□□□□□ -2.2
GPN3YLR243W GCN20P43535 752 aaKnown RBP1.3□□□□□ -2.2
GPN3YLR243W RTC4P53850 401 aa1.3□□□□□ -2.2
GPN3YLR243W CWC21Q03375 135 aaKnown RBP1.3□□□□□ -2.2
GPN3YLR243W GGA1Q06336 557 aa1.3□□□□□ -2.2
GPN3YLR243W YEL067CP39978 195 aa1.29□□□□□ -2.2
GPN3YLR243W HOP2P53187 214 aa1.29□□□□□ -2.2
GPN3YLR243W CUE4Q04201 117 aaPredicted RBP1.29□□□□□ -2.2
GPN3YLR243W SLH1P53327 1967 aaKnown RBP1.28□□□□□ -2.2
GPN3YLR243W RPL25P04456 142 aaKnown RBP1.28□□□□□ -2.2
GPN3YLR243W MAG1P22134 296 aaKnown RBP1.28□□□□□ -2.2
GPN3YLR243W SPO13P23624 291 aa1.28□□□□□ -2.2
GPN3YLR243W KDX1P36005 433 aa1.28□□□□□ -2.2
GPN3YLR243W YKT6P36015 200 aaKnown RBP1.28□□□□□ -2.2
GPN3YLR243W YCR087C-AP37263 153 aa1.28□□□□□ -2.2
GPN3YLR243W YAE1P47118 141 aaPredicted RBP1.28□□□□□ -2.2
GPN3YLR243W YNL247WP53852 767 aaKnown RBP1.28□□□□□ -2.2
GPN3YLR243W ADF1Q2V2Q1 113 aa1.28□□□□□ -2.2
GPN3YLR243W NCB2Q92317 146 aa1.28□□□□□ -2.2
GPN3YLR243W IKI3Q06706 1349 aaKnown RBP1.28□□□□□ -2.2
GPN3YLR243W ECM4P36156 370 aa1.27□□□□□ -2.21
GPN3YLR243W ERG10P41338 398 aaKnown RBP1.27□□□□□ -2.21
GPN3YLR243W POR1P04840 283 aaKnown RBP1.26□□□□□ -2.21
GPN3YLR243W NSP1P14907 823 aaKnown RBP1.26□□□□□ -2.21
GPN3YLR243W RFA3P26755 122 aaKnown RBP1.26□□□□□ -2.21
GPN3YLR243W NTG1P31378 399 aa1.26□□□□□ -2.21
GPN3YLR243W OCH1P31755 480 aa1.26□□□□□ -2.21
GPN3YLR243W YPL073CP40323 161 aa1.26□□□□□ -2.21
GPN3YLR243W FLX1P40464 311 aa1.26□□□□□ -2.21
GPN3YLR243W RPL37AP49166 88 aaKnown RBP1.26□□□□□ -2.21
GPN3YLR243W CDC36P06100 191 aaPredicted RBP1.25□□□□□ -2.21
GPN3YLR243W YHR212W-AP0CX91 67 aa1.25□□□□□ -2.21
GPN3YLR243W CKS1P20486 150 aaKnown RBP1.25□□□□□ -2.21
GPN3YLR243W APA2P22108 325 aa1.25□□□□□ -2.21
GPN3YLR243W MAK5P38112 773 aaPredicted RBP1.25□□□□□ -2.21
GPN3YLR243W IKI1P38874 309 aa1.25□□□□□ -2.21
GPN3YLR243W HMF1P40037 129 aaKnown RBP1.25□□□□□ -2.21
GPN3YLR243W AIM25P47140 327 aa1.25□□□□□ -2.21
GPN3YLR243W ARO8P53090 500 aaKnown RBP1.25□□□□□ -2.21
GPN3YLR243W EFM5P53200 248 aaKnown RBP1.25□□□□□ -2.21
GPN3YLR243W GIM3P53900 129 aa1.25□□□□□ -2.21
GPN3YLR243W PGA2P53903 129 aa1.25□□□□□ -2.21
GPN3YLR243W BRX1Q08235 291 aaKnown RBP1.25□□□□□ -2.21
GPN3YLR243W JIP3O13555 125 aa1.24□□□□□ -2.21
GPN3YLR243W YFL065CP43539 102 aa1.24□□□□□ -2.21
GPN3YLR243W MRPS17Q03246 237 aaPredicted RBP1.24□□□□□ -2.21
GPN3YLR243W HNT1Q04344 158 aaKnown RBP1.24□□□□□ -2.21
GPN3YLR243W DGA1Q08650 418 aa1.24□□□□□ -2.21
GPN3YLR243W YRA1Q12159 226 aaKnown RBP1.24□□□□□ -2.21
GPN3YLR243W PAN3P36102 679 aaPredicted RBP1.23□□□□□ -2.21
GPN3YLR243W TRM5P38793 499 aa1.23□□□□□ -2.21
GPN3YLR243W TVP23P38962 199 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms