Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 NSR1YGR159C 1245 nt17.66■□□□□ 0.42
LSM7P53905 YML009W-BYML009W-B 477 nt17.24■□□□□ 0.35
LSM7P53905 NOP1YDL014W 984 nt16.52■□□□□ 0.24
LSM7P53905 MDJ1YFL016C 1536 nt16.24■□□□□ 0.19
LSM7P53905 YJL027CYJL027C 417 nt14.93□□□□□ -0.02
LSM7P53905 YKL036CYKL036C 393 nt14.67□□□□□ -0.06
LSM7P53905 SRX1YKL086W 384 nt14.42□□□□□ -0.1
LSM7P53905 Q0297Q0297 156 nt14.26□□□□□ -0.13
LSM7P53905 DBP2YNL112W 1641 nt14.13□□□□□ -0.15
LSM7P53905 YBR190WYBR190W 312 nt14.02□□□□□ -0.17
LSM7P53905 SSA3YBL075C 1950 nt13.81□□□□□ -0.2
LSM7P53905 RTC3YHR087W 336 nt13.67□□□□□ -0.22
LSM7P53905 YCR051WYCR051W 669 nt13.63□□□□□ -0.23
LSM7P53905 TRN1tP(UGG)A 72 nt13.4□□□□□ -0.26
LSM7P53905 SUF9tP(UGG)F 72 nt13.4□□□□□ -0.26
LSM7P53905 SUF8tP(UGG)H 72 nt13.4□□□□□ -0.26
LSM7P53905 tP(UGG)LtP(UGG)L 72 nt13.4□□□□□ -0.26
LSM7P53905 SUF7tP(UGG)M 72 nt13.4□□□□□ -0.26
LSM7P53905 tP(UGG)N1tP(UGG)N1 72 nt13.4□□□□□ -0.26
LSM7P53905 tP(UGG)N2tP(UGG)N2 72 nt13.4□□□□□ -0.26
LSM7P53905 tP(UGG)O1tP(UGG)O1 72 nt13.4□□□□□ -0.26
LSM7P53905 SUF11tP(UGG)O2 72 nt13.4□□□□□ -0.26
LSM7P53905 CCC1YLR220W 969 nt13.26□□□□□ -0.29
LSM7P53905 PUT4YOR348C 1884 nt13.2□□□□□ -0.3
LSM7P53905 RVS167YDR388W 1449 nt13.15□□□□□ -0.3
LSM7P53905 SCS3YGL126W 1143 nt13.03□□□□□ -0.32
LSM7P53905 SCJ1YMR214W 1134 nt12.95□□□□□ -0.34
LSM7P53905 RPP1BYDL130W 321 nt12.79□□□□□ -0.36
LSM7P53905 ARE1YCR048W 1833 nt12.77□□□□□ -0.37
LSM7P53905 POA1YBR022W 534 nt12.73□□□□□ -0.37
LSM7P53905 YOL085CYOL085C 342 nt12.72□□□□□ -0.37
LSM7P53905 YHR049C-AYHR049C-A 297 nt12.61□□□□□ -0.39
LSM7P53905 SAH1YER043C 1350 nt12.59□□□□□ -0.39
LSM7P53905 PKP1YIL042C 1185 nt12.59□□□□□ -0.39
LSM7P53905 URN1YPR152C 1398 nt12.58□□□□□ -0.4
LSM7P53905 BSC6YOL137W 1494 nt12.57□□□□□ -0.4
LSM7P53905 SHR5YOL110W 714 nt12.55□□□□□ -0.4
LSM7P53905 OPI9YLR338W 858 nt12.52□□□□□ -0.41
LSM7P53905 tP(UGG)O3tP(UGG)O3 72 nt12.48□□□□□ -0.41
LSM7P53905 SPT5YML010W 3192 nt12.44□□□□□ -0.42
LSM7P53905 DEP1YAL013W 1218 nt12.39□□□□□ -0.43
LSM7P53905 SSA4YER103W 1929 nt12.3□□□□□ -0.44
LSM7P53905 PET122YER153C 765 nt12.29□□□□□ -0.44
LSM7P53905 BUD23YCR047C 828 nt12.27□□□□□ -0.45
LSM7P53905 RPN10YHR200W 807 nt12.25□□□□□ -0.45
LSM7P53905 PUN1YLR414C 792 nt12.15□□□□□ -0.46
LSM7P53905 YNL208WYNL208W 600 nt12.14□□□□□ -0.47
LSM7P53905 PTC2YER089C 1395 nt12.1□□□□□ -0.47
LSM7P53905 YDJ1YNL064C 1230 nt12.08□□□□□ -0.48
LSM7P53905 NAB2YGL122C 1578 nt12.04□□□□□ -0.48
LSM7P53905 SCR1SCR1 522 nt12□□□□□ -0.49
LSM7P53905 YJR018WYJR018W 363 nt11.96□□□□□ -0.49
LSM7P53905 GAR1YHR089C 618 nt11.89□□□□□ -0.51
LSM7P53905 BDF1YLR399C 2061 nt11.89□□□□□ -0.51
LSM7P53905 MEP2YNL142W 1500 nt11.87□□□□□ -0.51
LSM7P53905 RRN5YLR141W 1092 nt11.87□□□□□ -0.51
LSM7P53905 FIS1YIL065C 468 nt11.8□□□□□ -0.52
LSM7P53905 DAL1YIR027C 1383 nt11.76□□□□□ -0.53
LSM7P53905 TAT1YBR069C 1860 nt11.72□□□□□ -0.53
LSM7P53905 FPR4YLR449W 1179 nt11.71□□□□□ -0.53
LSM7P53905 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
LSM7P53905 PHO4YFR034C 939 nt11.65□□□□□ -0.54
LSM7P53905 YPS1YLR120C 1710 nt11.64□□□□□ -0.55
LSM7P53905 YJR120WYJR120W 351 nt11.64□□□□□ -0.55
LSM7P53905 YER088W-BYER088W-B 147 nt11.63□□□□□ -0.55
LSM7P53905 INM2YDR287W 879 nt11.61□□□□□ -0.55
LSM7P53905 RPP2BYDR382W 333 nt11.56□□□□□ -0.56
LSM7P53905 YHR165W-AYHR165W-A 312 nt11.55□□□□□ -0.56
LSM7P53905 TIR1YER011W 765 nt11.53□□□□□ -0.56
LSM7P53905 SSA1YAL005C 1929 nt11.52□□□□□ -0.57
LSM7P53905 EMI2YDR516C 1503 nt11.5□□□□□ -0.57
LSM7P53905 YBR220CYBR220C 1683 nt11.49□□□□□ -0.57
LSM7P53905 ATS1YAL020C 1002 nt11.48□□□□□ -0.57
LSM7P53905 YDR095CYDR095C 411 nt11.47□□□□□ -0.57
LSM7P53905 YMR090WYMR090W 684 nt11.47□□□□□ -0.57
LSM7P53905 RSB1YOR049C 1065 nt11.44□□□□□ -0.58
LSM7P53905 YBL100CYBL100C 315 nt11.41□□□□□ -0.58
LSM7P53905 PAC11YDR488C 1602 nt11.4□□□□□ -0.58
LSM7P53905 YDL221WYDL221W 552 nt11.36□□□□□ -0.59
LSM7P53905 SDH1YKL148C 1923 nt11.34□□□□□ -0.59
LSM7P53905 CAC2YML102W 1407 nt11.29□□□□□ -0.6
LSM7P53905 PTP1YDL230W 1008 nt11.27□□□□□ -0.61
LSM7P53905 RPP2AYOL039W 321 nt11.25□□□□□ -0.61
LSM7P53905 FUN26YAL022C 1554 nt11.24□□□□□ -0.61
LSM7P53905 BDH2YAL061W 1254 nt11.23□□□□□ -0.61
LSM7P53905 PCH2YBR186W 1695 nt11.21□□□□□ -0.61
LSM7P53905 ALF1YNL148C 765 nt11.21□□□□□ -0.61
LSM7P53905 SRB2YHR041C 633 nt11.2□□□□□ -0.62
LSM7P53905 SCC4YER147C 1875 nt11.19□□□□□ -0.62
LSM7P53905 SEC11YIR022W 504 nt11.18□□□□□ -0.62
LSM7P53905 GUT2YIL155C 1950 nt11.17□□□□□ -0.62
LSM7P53905 TRM9YML014W 840 nt11.12□□□□□ -0.63
LSM7P53905 IRC15YPL017C 1500 nt11.12□□□□□ -0.63
LSM7P53905 GIS3YLR094C 1509 nt11.06□□□□□ -0.64
LSM7P53905 SIS1YNL007C 1059 nt11.06□□□□□ -0.64
LSM7P53905 CCT6YDR188W 1641 nt11.04□□□□□ -0.64
LSM7P53905 NVJ2YPR091C 2313 nt11□□□□□ -0.65
LSM7P53905 SUF2tP(AGG)C 72 nt10.99□□□□□ -0.65
LSM7P53905 SUF10tP(AGG)N 72 nt10.99□□□□□ -0.65
LSM7P53905 YSC84YHR016C 1407 nt10.99□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms