Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 NSR1YGR159C 1245 nt15.34■□□□□ 0.05
VAR1P02381 YML009W-BYML009W-B 477 nt15.26■□□□□ 0.03
VAR1P02381 NOP1YDL014W 984 nt14.74□□□□□ -0.05
VAR1P02381 MDJ1YFL016C 1536 nt13.83□□□□□ -0.2
VAR1P02381 YKL036CYKL036C 393 nt13.38□□□□□ -0.27
VAR1P02381 SRX1YKL086W 384 nt12.85□□□□□ -0.35
VAR1P02381 Q0297Q0297 156 nt12.79□□□□□ -0.36
VAR1P02381 YJL027CYJL027C 417 nt12.77□□□□□ -0.37
VAR1P02381 YCR051WYCR051W 669 nt12.21□□□□□ -0.45
VAR1P02381 SSA3YBL075C 1950 nt12.13□□□□□ -0.47
VAR1P02381 DBP2YNL112W 1641 nt12.1□□□□□ -0.47
VAR1P02381 SCS3YGL126W 1143 nt12.03□□□□□ -0.48
VAR1P02381 YBR190WYBR190W 312 nt11.85□□□□□ -0.51
VAR1P02381 TRN1tP(UGG)A 72 nt11.75□□□□□ -0.53
VAR1P02381 SUF9tP(UGG)F 72 nt11.75□□□□□ -0.53
VAR1P02381 SUF8tP(UGG)H 72 nt11.75□□□□□ -0.53
VAR1P02381 tP(UGG)LtP(UGG)L 72 nt11.75□□□□□ -0.53
VAR1P02381 SUF7tP(UGG)M 72 nt11.75□□□□□ -0.53
VAR1P02381 tP(UGG)N1tP(UGG)N1 72 nt11.75□□□□□ -0.53
VAR1P02381 tP(UGG)N2tP(UGG)N2 72 nt11.75□□□□□ -0.53
VAR1P02381 tP(UGG)O1tP(UGG)O1 72 nt11.75□□□□□ -0.53
VAR1P02381 SUF11tP(UGG)O2 72 nt11.75□□□□□ -0.53
VAR1P02381 CCC1YLR220W 969 nt11.67□□□□□ -0.54
VAR1P02381 RTC3YHR087W 336 nt11.62□□□□□ -0.55
VAR1P02381 YOL085CYOL085C 342 nt11.57□□□□□ -0.56
VAR1P02381 RPP1BYDL130W 321 nt11.49□□□□□ -0.57
VAR1P02381 PKP1YIL042C 1185 nt11.45□□□□□ -0.58
VAR1P02381 RVS167YDR388W 1449 nt11.4□□□□□ -0.58
VAR1P02381 SCJ1YMR214W 1134 nt11.24□□□□□ -0.61
VAR1P02381 tP(UGG)O3tP(UGG)O3 72 nt11.05□□□□□ -0.64
VAR1P02381 PET122YER153C 765 nt11□□□□□ -0.65
VAR1P02381 SHR5YOL110W 714 nt10.92□□□□□ -0.66
VAR1P02381 PUT4YOR348C 1884 nt10.9□□□□□ -0.66
VAR1P02381 SCR1SCR1 522 nt10.86□□□□□ -0.67
VAR1P02381 URN1YPR152C 1398 nt10.77□□□□□ -0.69
VAR1P02381 DEP1YAL013W 1218 nt10.7□□□□□ -0.7
VAR1P02381 ATS1YAL020C 1002 nt10.69□□□□□ -0.7
VAR1P02381 YDJ1YNL064C 1230 nt10.68□□□□□ -0.7
VAR1P02381 RRN5YLR141W 1092 nt10.67□□□□□ -0.7
VAR1P02381 OPI9YLR338W 858 nt10.64□□□□□ -0.71
VAR1P02381 SAH1YER043C 1350 nt10.64□□□□□ -0.71
VAR1P02381 ARE1YCR048W 1833 nt10.63□□□□□ -0.71
VAR1P02381 RPN10YHR200W 807 nt10.59□□□□□ -0.71
VAR1P02381 POA1YBR022W 534 nt10.58□□□□□ -0.72
VAR1P02381 YHR049C-AYHR049C-A 297 nt10.54□□□□□ -0.72
VAR1P02381 GAR1YHR089C 618 nt10.51□□□□□ -0.73
VAR1P02381 YNL208WYNL208W 600 nt10.51□□□□□ -0.73
VAR1P02381 YER088W-BYER088W-B 147 nt10.44□□□□□ -0.74
VAR1P02381 NVJ2YPR091C 2313 nt10.44□□□□□ -0.74
VAR1P02381 SSA4YER103W 1929 nt10.41□□□□□ -0.74
VAR1P02381 PAC11YDR488C 1602 nt10.4□□□□□ -0.74
VAR1P02381 RSB1YOR049C 1065 nt10.4□□□□□ -0.74
VAR1P02381 BSC6YOL137W 1494 nt10.38□□□□□ -0.75
VAR1P02381 FPS1YLL043W 2010 nt10.38□□□□□ -0.75
VAR1P02381 SPT5YML010W 3192 nt10.37□□□□□ -0.75
VAR1P02381 PUN1YLR414C 792 nt10.35□□□□□ -0.75
VAR1P02381 BUD23YCR047C 828 nt10.31□□□□□ -0.76
VAR1P02381 YJR018WYJR018W 363 nt10.26□□□□□ -0.77
VAR1P02381 PTC2YER089C 1395 nt10.26□□□□□ -0.77
VAR1P02381 SSA1YAL005C 1929 nt10.25□□□□□ -0.77
VAR1P02381 TIR1YER011W 765 nt10.16□□□□□ -0.78
VAR1P02381 NAB2YGL122C 1578 nt10.15□□□□□ -0.78
VAR1P02381 BDF1YLR399C 2061 nt10.12□□□□□ -0.79
VAR1P02381 RPP2BYDR382W 333 nt10.02□□□□□ -0.81
VAR1P02381 YJR120WYJR120W 351 nt9.99□□□□□ -0.81
VAR1P02381 FPR4YLR449W 1179 nt9.99□□□□□ -0.81
VAR1P02381 TAT1YBR069C 1860 nt9.99□□□□□ -0.81
VAR1P02381 DAL1YIR027C 1383 nt9.98□□□□□ -0.81
VAR1P02381 FIS1YIL065C 468 nt9.95□□□□□ -0.82
VAR1P02381 PST2YDR032C 597 nt9.93□□□□□ -0.82
VAR1P02381 INM2YDR287W 879 nt9.93□□□□□ -0.82
VAR1P02381 PHO4YFR034C 939 nt9.87□□□□□ -0.83
VAR1P02381 SRB2YHR041C 633 nt9.81□□□□□ -0.84
VAR1P02381 YBL100CYBL100C 315 nt9.8□□□□□ -0.84
VAR1P02381 MEP2YNL142W 1500 nt9.76□□□□□ -0.85
VAR1P02381 BDH2YAL061W 1254 nt9.75□□□□□ -0.85
VAR1P02381 YPS1YLR120C 1710 nt9.75□□□□□ -0.85
VAR1P02381 YJL225CYJL225C 5277 nt9.74□□□□□ -0.85
VAR1P02381 YHR165W-AYHR165W-A 312 nt9.7□□□□□ -0.86
VAR1P02381 YDR095CYDR095C 411 nt9.66□□□□□ -0.86
VAR1P02381 WWM1YFL010C 636 nt9.66□□□□□ -0.86
VAR1P02381 FUN26YAL022C 1554 nt9.66□□□□□ -0.86
VAR1P02381 TRM9YML014W 840 nt9.63□□□□□ -0.87
VAR1P02381 ALF1YNL148C 765 nt9.62□□□□□ -0.87
VAR1P02381 DCW1YKL046C 1350 nt9.6□□□□□ -0.87
VAR1P02381 SHU1YHL006C 453 nt9.59□□□□□ -0.87
VAR1P02381 UME6YDR207C 2511 nt9.59□□□□□ -0.87
VAR1P02381 LSM3YLR438C-A 270 nt9.58□□□□□ -0.88
VAR1P02381 YGR021WYGR021W 873 nt9.55□□□□□ -0.88
VAR1P02381 YAL037C-BYAL037C-B 975 nt9.53□□□□□ -0.88
VAR1P02381 YFL021C-AYFL021C-A 855 nt9.52□□□□□ -0.89
VAR1P02381 CCT6YDR188W 1641 nt9.49□□□□□ -0.89
VAR1P02381 RPP2AYOL039W 321 nt9.49□□□□□ -0.89
VAR1P02381 EMI2YDR516C 1503 nt9.49□□□□□ -0.89
VAR1P02381 SUF2tP(AGG)C 72 nt9.48□□□□□ -0.89
VAR1P02381 SUF10tP(AGG)N 72 nt9.48□□□□□ -0.89
VAR1P02381 HOM6YJR139C 1080 nt9.48□□□□□ -0.89
VAR1P02381 YMR090WYMR090W 684 nt9.48□□□□□ -0.89
VAR1P02381 YKL097CYKL097C 411 nt9.46□□□□□ -0.9
VAR1P02381 RDN37-1RDN37-1 5354 nt9.46□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms