RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W UBC6P33296 250 aaPredicted RBP1.97□□□□□ -2.09
NOP56YLR197W YOR062CP36025 268 aa1.97□□□□□ -2.09
NOP56YLR197W MAK5P38112 773 aaPredicted RBP1.97□□□□□ -2.09
NOP56YLR197W AME1P38313 324 aa1.97□□□□□ -2.09
NOP56YLR197W YER121WP40076 114 aa1.97□□□□□ -2.09
NOP56YLR197W YGR219WP53307 113 aa1.97□□□□□ -2.09
NOP56YLR197W YNL184CP53876 108 aa1.97□□□□□ -2.09
NOP56YLR197W YMR315WQ04869 349 aaKnown RBP1.97□□□□□ -2.09
NOP56YLR197W NEJ1Q06148 342 aa1.97□□□□□ -2.09
NOP56YLR197W YOL160WQ08321 113 aa1.97□□□□□ -2.09
NOP56YLR197W MDH3P32419 343 aaKnown RBP RIP-Chip data1.96□□□□□ -2.09not detected
NOP56YLR197W GLE2P40066 365 aa1.96□□□□□ -2.09
NOP56YLR197W FMP32P43557 207 aa1.96□□□□□ -2.09
NOP56YLR197W TMA22P47089 198 aaPredicted RBP1.96□□□□□ -2.09
NOP56YLR197W UBC12P52491 188 aa1.96□□□□□ -2.09
NOP56YLR197W CGI121Q03705 181 aaKnown RBP1.96□□□□□ -2.09
NOP56YLR197W TRM12Q04235 462 aa1.96□□□□□ -2.09
NOP56YLR197W YOR283WQ12040 230 aaKnown RBP1.96□□□□□ -2.09
NOP56YLR197W YLR050CQ12155 161 aaKnown RBP1.96□□□□□ -2.09
NOP56YLR197W RIO1Q12196 484 aaKnown RBP1.96□□□□□ -2.09
NOP56YLR197W MBF1O14467 151 aaKnown RBP1.96□□□□□ -2.1
NOP56YLR197W CNB1P25296 175 aa1.96□□□□□ -2.1
NOP56YLR197W LSM4P40070 187 aaKnown RBP1.96□□□□□ -2.1
NOP56YLR197W YKE4P40544 346 aa1.96□□□□□ -2.1
NOP56YLR197W CIS3P47001 227 aa1.96□□□□□ -2.1
NOP56YLR197W AIF1P52923 378 aa1.96□□□□□ -2.1
NOP56YLR197W DAD3P69850 94 aa1.96□□□□□ -2.1
NOP56YLR197W YPL162CQ12042 273 aa1.96□□□□□ -2.1
NOP56YLR197W BET1P22804 142 aa1.95□□□□□ -2.1
NOP56YLR197W SEC17P32602 292 aa1.95□□□□□ -2.1
NOP56YLR197W CLG1P35190 452 aa1.95□□□□□ -2.1
NOP56YLR197W YKR041WP36134 250 aa1.95□□□□□ -2.1
NOP56YLR197W UTP30P36144 274 aaKnown RBP1.95□□□□□ -2.1
NOP56YLR197W YHR180WP38868 163 aa1.95□□□□□ -2.1
NOP56YLR197W NVJ1P38881 321 aa1.95□□□□□ -2.1
NOP56YLR197W YER076CP40049 302 aa1.95□□□□□ -2.1
NOP56YLR197W NUP49Q02199 472 aa1.95□□□□□ -2.1
NOP56YLR197W SWP1Q02795 286 aa1.95□□□□□ -2.1
NOP56YLR197W YDR249CQ03787 373 aa1.95□□□□□ -2.1
NOP56YLR197W PLP1Q04004 230 aa1.95□□□□□ -2.1
NOP56YLR197W YLR031WQ07978 186 aa1.95□□□□□ -2.1
NOP56YLR197W RPS24AP0CX31 135 aaKnown RBP1.94□□□□□ -2.1
NOP56YLR197W RPS24BP0CX32 135 aaKnown RBP1.94□□□□□ -2.1
NOP56YLR197W URA5P13298 226 aaKnown RBP1.94□□□□□ -2.1
NOP56YLR197W MRPS28P21771 286 aa1.94□□□□□ -2.1
NOP56YLR197W SEC14P24280 304 aaKnown RBP1.94□□□□□ -2.1
NOP56YLR197W PEX4P29340 183 aa1.94□□□□□ -2.1
NOP56YLR197W ARO7P32178 256 aa1.94□□□□□ -2.1
NOP56YLR197W FIG1P38224 298 aa1.94□□□□□ -2.1
NOP56YLR197W PGD1P40356 397 aa1.94□□□□□ -2.1
NOP56YLR197W PRM10P42946 383 aa1.94□□□□□ -2.1
NOP56YLR197W MRPS8Q03799 155 aa1.94□□□□□ -2.1
NOP56YLR197W HPT1Q04178 221 aaKnown RBP1.94□□□□□ -2.1
NOP56YLR197W YLR053CQ12026 108 aa1.94□□□□□ -2.1
NOP56YLR197W PEX11Q12462 236 aa1.94□□□□□ -2.1
NOP56YLR197W TSC3Q3E790 80 aa1.94□□□□□ -2.1
NOP56YLR197W RPB3P16370 318 aaKnown RBP1.93□□□□□ -2.1
NOP56YLR197W PET9P18239 318 aaKnown RBP1.93□□□□□ -2.1
NOP56YLR197W CKS1P20486 150 aaKnown RBP1.93□□□□□ -2.1
NOP56YLR197W AHC2P25649 128 aa1.93□□□□□ -2.1
NOP56YLR197W MEI4P29467 408 aa1.93□□□□□ -2.1
NOP56YLR197W ERV15P38312 142 aa1.93□□□□□ -2.1
NOP56YLR197W DAN1P47178 298 aa1.93□□□□□ -2.1
NOP56YLR197W ARO8P53090 500 aaKnown RBP1.93□□□□□ -2.1
NOP56YLR197W AIM34Q03673 198 aa1.93□□□□□ -2.1
NOP56YLR197W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
NOP56YLR197W BRX1Q08235 291 aaKnown RBP1.93□□□□□ -2.1
NOP56YLR197W MCP1Q12106 302 aa1.93□□□□□ -2.1
NOP56YLR197W YFR032C-BQ8TGU2 87 aa1.93□□□□□ -2.1
NOP56YLR197W CMD1P06787 147 aaKnown RBP1.92□□□□□ -2.1
NOP56YLR197W YCR090CP25654 182 aaKnown RBP1.92□□□□□ -2.1
NOP56YLR197W PHO88P38264 188 aaPredicted RBP1.92□□□□□ -2.1
NOP56YLR197W AIM2P39721 246 aa1.92□□□□□ -2.1
NOP56YLR197W ICE2P40499 491 aa1.92□□□□□ -2.1
NOP56YLR197W RPL33BP41056 107 aaKnown RBP1.92□□□□□ -2.1
NOP56YLR197W SKI6P46948 246 aaPredicted RBP1.92□□□□□ -2.1
NOP56YLR197W ARP3P47117 449 aaKnown RBP1.92□□□□□ -2.1
NOP56YLR197W HNT1Q04344 158 aaKnown RBP1.92□□□□□ -2.1
NOP56YLR197W SPG3Q04398 127 aaPredicted RBP1.92□□□□□ -2.1
NOP56YLR197W SHH4Q06236 168 aa1.92□□□□□ -2.1
NOP56YLR197W YPR014CQ6B0W2 109 aa1.92□□□□□ -2.1
NOP56YLR197W TIM9O74700 87 aa1.91□□□□□ -2.1
NOP56YLR197W SCL1P21243 252 aaKnown RBP1.91□□□□□ -2.1
NOP56YLR197W MRPL17P36528 281 aa1.91□□□□□ -2.1
NOP56YLR197W DER1P38307 211 aa1.91□□□□□ -2.1
NOP56YLR197W ERG25P53045 309 aa1.91□□□□□ -2.1
NOP56YLR197W PGA1P53896 198 aa1.91□□□□□ -2.1
NOP56YLR197W NSL1Q12143 216 aa1.91□□□□□ -2.1
NOP56YLR197W MPD1Q12404 318 aaKnown RBP1.91□□□□□ -2.1
NOP56YLR197W TVP38P36164 337 aa1.91□□□□□ -2.1
NOP56YLR197W FMP23P38231 175 aa1.91□□□□□ -2.1
NOP56YLR197W UMP1P38293 148 aa1.91□□□□□ -2.1
NOP56YLR197W EDC3P39998 551 aaKnown RBP1.91□□□□□ -2.1
NOP56YLR197W GVP36P40531 326 aaKnown RBP1.91□□□□□ -2.1
NOP56YLR197W YFH7P43591 353 aa1.91□□□□□ -2.1
NOP56YLR197W YGL235WP53071 178 aa1.91□□□□□ -2.1
NOP56YLR197W YNR062CP53748 327 aa1.91□□□□□ -2.1
NOP56YLR197W MAK3Q03503 176 aa1.91□□□□□ -2.1
NOP56YLR197W RRP17Q04031 235 aaPredicted RBP1.91□□□□□ -2.1
NOP56YLR197W GPI17Q04080 534 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms