RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C FEX2Q08991 375 aa2□□□□□ -2.09
UBX3YDL091C ATG31Q12421 196 aa2□□□□□ -2.09
UBX3YDL091C SAS5Q99314 248 aa2□□□□□ -2.09
UBX3YDL091C SNF2P22082 1703 aa2□□□□□ -2.09
UBX3YDL091C YOR1P53049 1477 aa2□□□□□ -2.09
UBX3YDL091C YAL064W-BO13512 126 aa1.99□□□□□ -2.09
UBX3YDL091C TDH2P00358 332 aaKnown RBP1.99□□□□□ -2.09
UBX3YDL091C SPS2P08459 502 aa1.99□□□□□ -2.09
UBX3YDL091C YBR121C-AP0C5L4 52 aa1.99□□□□□ -2.09
UBX3YDL091C MRPL44P19956 98 aa1.99□□□□□ -2.09
UBX3YDL091C PRE1P22141 198 aaKnown RBP1.99□□□□□ -2.09
UBX3YDL091C ADE1P27616 306 aa1.99□□□□□ -2.09
UBX3YDL091C MIG1P27705 504 aa1.99□□□□□ -2.09
UBX3YDL091C PEX3P28795 441 aa1.99□□□□□ -2.09
UBX3YDL091C OCH1P31755 480 aa1.99□□□□□ -2.09
UBX3YDL091C PRP18P33411 251 aaPredicted RBP1.99□□□□□ -2.09
UBX3YDL091C CBT1P36038 271 aaPredicted RBP1.99□□□□□ -2.09
UBX3YDL091C MRPL24P36525 258 aaPredicted RBP1.99□□□□□ -2.09
UBX3YDL091C ETR1P38071 380 aa1.99□□□□□ -2.09
UBX3YDL091C LSM4P40070 187 aaKnown RBP1.99□□□□□ -2.09
UBX3YDL091C RFC2P40348 353 aa1.99□□□□□ -2.09
UBX3YDL091C POG1P40473 351 aa1.99□□□□□ -2.09
UBX3YDL091C AVT7P40501 490 aa1.99□□□□□ -2.09
UBX3YDL091C RPL10P41805 221 aaKnown RBP1.99□□□□□ -2.09
UBX3YDL091C YAR1P46683 200 aa1.99□□□□□ -2.09
UBX3YDL091C GPI14P47088 403 aaKnown RBP1.99□□□□□ -2.09
UBX3YDL091C MOG1P47123 218 aa1.99□□□□□ -2.09
UBX3YDL091C TPN1P53099 579 aa1.99□□□□□ -2.09
UBX3YDL091C PEX31P53203 462 aa1.99□□□□□ -2.09
UBX3YDL091C YIP3P53633 176 aa1.99□□□□□ -2.09
UBX3YDL091C YNL010WP53981 241 aaKnown RBP1.99□□□□□ -2.09
UBX3YDL091C PRP11Q07350 266 aaPredicted RBP1.99□□□□□ -2.09
UBX3YDL091C SLD7Q08457 257 aa1.99□□□□□ -2.09
UBX3YDL091C USO1P25386 1790 aa1.99□□□□□ -2.09
UBX3YDL091C KOG1P38873 1557 aa1.99□□□□□ -2.09
UBX3YDL091C TY1B-JR2P47100 1755 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C TY1B-ER2Q03619 1755 aa1.98□□□□□ -2.09
UBX3YDL091C TY1B-MR1Q04214 1755 aa1.98□□□□□ -2.09
UBX3YDL091C TY1B-MR2Q04670 1755 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C TY1B-LR1Q12088 1755 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C TY1B-NL1Q12112 1755 aa1.98□□□□□ -2.09
UBX3YDL091C TY1B-GR1Q12141 1755 aa1.98□□□□□ -2.09
UBX3YDL091C TY1B-BLQ12490 1755 aa1.98□□□□□ -2.09
UBX3YDL091C CDC7P06243 507 aa1.98□□□□□ -2.09
UBX3YDL091C CDC33P07260 213 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C PUT1P09368 476 aa1.98□□□□□ -2.09
UBX3YDL091C PHO13P19881 312 aa1.98□□□□□ -2.09
UBX3YDL091C AHC2P25649 128 aa1.98□□□□□ -2.09
UBX3YDL091C SUA7P29055 345 aaPredicted RBP1.98□□□□□ -2.09
UBX3YDL091C ERG2P32352 222 aa1.98□□□□□ -2.09
UBX3YDL091C MDH3P32419 343 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
UBX3YDL091C HYM1P32464 399 aa1.98□□□□□ -2.09
UBX3YDL091C YBR062CP38239 180 aa1.98□□□□□ -2.09
UBX3YDL091C YBR220CP38318 560 aa1.98□□□□□ -2.09
UBX3YDL091C GOS1P38736 223 aa1.98□□□□□ -2.09
UBX3YDL091C GNA1P43577 159 aaPredicted RBP1.98□□□□□ -2.09
UBX3YDL091C AIF1P52923 378 aa1.98□□□□□ -2.09
UBX3YDL091C ARO8P53090 500 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C GTR2P53290 341 aa1.98□□□□□ -2.09
UBX3YDL091C TRM44Q02648 567 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C DIG2Q03373 323 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C TVP15Q03860 143 aa1.98□□□□□ -2.09
UBX3YDL091C TVP18Q04767 167 aa1.98□□□□□ -2.09
UBX3YDL091C ATG39Q06159 398 aa1.98□□□□□ -2.09
UBX3YDL091C PAM18Q07914 168 aa1.98□□□□□ -2.09
UBX3YDL091C GTT2Q12390 233 aa1.98□□□□□ -2.09
UBX3YDL091C THP2O13539 261 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C RHO1P06780 209 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C BCY1P07278 416 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C ERD2P18414 219 aa1.98□□□□□ -2.09
UBX3YDL091C SCL1P21243 252 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C CWP1P28319 239 aa1.98□□□□□ -2.09
UBX3YDL091C PTM1P32857 523 aa1.98□□□□□ -2.09
UBX3YDL091C RIB1P38066 345 aa1.98□□□□□ -2.09
UBX3YDL091C POP8P38208 133 aa1.98□□□□□ -2.09
UBX3YDL091C TRM7P38238 310 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C PRS3P38689 320 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C RPF1P38805 295 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C BIG1P38813 335 aa1.98□□□□□ -2.09
UBX3YDL091C NSE4P43124 402 aa1.98□□□□□ -2.09
UBX3YDL091C YJL118WP47022 219 aa1.98□□□□□ -2.09
UBX3YDL091C UBC12P52491 188 aa1.98□□□□□ -2.09
UBX3YDL091C YGR026WP53217 278 aa1.98□□□□□ -2.09
UBX3YDL091C NOP19P53317 196 aaPredicted RBP1.98□□□□□ -2.09
UBX3YDL091C AIM34Q03673 198 aa1.98□□□□□ -2.09
UBX3YDL091C PKR1Q03880 122 aaKnown RBP1.98□□□□□ -2.09
UBX3YDL091C VBA1Q04301 562 aa1.98□□□□□ -2.09
UBX3YDL091C PEX10Q05568 337 aa1.98□□□□□ -2.09
UBX3YDL091C YPL257WQ08974 193 aa1.98□□□□□ -2.09
UBX3YDL091C FAS2P19097 1887 aaKnown RBP1.97□□□□□ -2.09
UBX3YDL091C POL1P13382 1468 aa1.97□□□□□ -2.09
UBX3YDL091C TY3B-GQ99315 1547 aa1.97□□□□□ -2.09
UBX3YDL091C RSF2P46974 1380 aa1.97□□□□□ -2.09
UBX3YDL091C PDR11P40550 1411 aa1.97□□□□□ -2.09
UBX3YDL091C DPM1P14020 267 aaKnown RBP1.97□□□□□ -2.09
UBX3YDL091C DAL82P21705 255 aa1.97□□□□□ -2.09
UBX3YDL091C SEC22P22214 214 aa1.97□□□□□ -2.09
UBX3YDL091C TRR1P29509 319 aaKnown RBP1.97□□□□□ -2.09
UBX3YDL091C LHP1P33399 275 aaKnown RBP1.97□□□□□ -2.09
UBX3YDL091C LDB7P38210 180 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms