Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeastyeast

Known RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PKR1Q03880 NSR1YGR159C 1245 nt14.77□□□□□ -0.05
PKR1Q03880 YML009W-BYML009W-B 477 nt14.38□□□□□ -0.11
PKR1Q03880 NOP1YDL014W 984 nt13.92□□□□□ -0.18
PKR1Q03880 MDJ1YFL016C 1536 nt13.71□□□□□ -0.21
PKR1Q03880 SSA3YBL075C 1950 nt12.96□□□□□ -0.33
PKR1Q03880 YJL027CYJL027C 417 nt12.53□□□□□ -0.4
PKR1Q03880 YKL036CYKL036C 393 nt12.37□□□□□ -0.43
PKR1Q03880 SRX1YKL086W 384 nt12.11□□□□□ -0.47
PKR1Q03880 Q0297Q0297 156 nt11.99□□□□□ -0.49
PKR1Q03880 YBR190WYBR190W 312 nt11.96□□□□□ -0.49
PKR1Q03880 DBP2YNL112W 1641 nt11.89□□□□□ -0.51
PKR1Q03880 PUT4YOR348C 1884 nt11.57□□□□□ -0.56
PKR1Q03880 RTC3YHR087W 336 nt11.5□□□□□ -0.57
PKR1Q03880 YCR051WYCR051W 669 nt11.42□□□□□ -0.58
PKR1Q03880 SPT5YML010W 3192 nt11.35□□□□□ -0.59
PKR1Q03880 SSA4YER103W 1929 nt11.25□□□□□ -0.61
PKR1Q03880 TRN1tP(UGG)A 72 nt11.17□□□□□ -0.62
PKR1Q03880 SUF9tP(UGG)F 72 nt11.17□□□□□ -0.62
PKR1Q03880 SUF8tP(UGG)H 72 nt11.17□□□□□ -0.62
PKR1Q03880 tP(UGG)LtP(UGG)L 72 nt11.17□□□□□ -0.62
PKR1Q03880 SUF7tP(UGG)M 72 nt11.17□□□□□ -0.62
PKR1Q03880 tP(UGG)N1tP(UGG)N1 72 nt11.17□□□□□ -0.62
PKR1Q03880 tP(UGG)N2tP(UGG)N2 72 nt11.17□□□□□ -0.62
PKR1Q03880 tP(UGG)O1tP(UGG)O1 72 nt11.17□□□□□ -0.62
PKR1Q03880 SUF11tP(UGG)O2 72 nt11.17□□□□□ -0.62
PKR1Q03880 ARE1YCR048W 1833 nt11.08□□□□□ -0.64
PKR1Q03880 CCC1YLR220W 969 nt11.02□□□□□ -0.65
PKR1Q03880 POA1YBR022W 534 nt11.02□□□□□ -0.65
PKR1Q03880 RVS167YDR388W 1449 nt11.01□□□□□ -0.65
PKR1Q03880 BSC6YOL137W 1494 nt11□□□□□ -0.65
PKR1Q03880 BDF1YLR399C 2061 nt10.99□□□□□ -0.65
PKR1Q03880 SCS3YGL126W 1143 nt10.96□□□□□ -0.65
PKR1Q03880 YHR049C-AYHR049C-A 297 nt10.88□□□□□ -0.67
PKR1Q03880 TAT1YBR069C 1860 nt10.82□□□□□ -0.68
PKR1Q03880 PAC11YDR488C 1602 nt10.8□□□□□ -0.68
PKR1Q03880 RPP1BYDL130W 321 nt10.75□□□□□ -0.69
PKR1Q03880 SCJ1YMR214W 1134 nt10.74□□□□□ -0.69
PKR1Q03880 SAH1YER043C 1350 nt10.72□□□□□ -0.69
PKR1Q03880 URN1YPR152C 1398 nt10.7□□□□□ -0.7
PKR1Q03880 YOL085CYOL085C 342 nt10.7□□□□□ -0.7
PKR1Q03880 NVJ2YPR091C 2313 nt10.69□□□□□ -0.7
PKR1Q03880 OPI9YLR338W 858 nt10.62□□□□□ -0.71
PKR1Q03880 PKP1YIL042C 1185 nt10.52□□□□□ -0.73
PKR1Q03880 FPS1YLL043W 2010 nt10.48□□□□□ -0.73
PKR1Q03880 SHR5YOL110W 714 nt10.48□□□□□ -0.73
PKR1Q03880 BUD23YCR047C 828 nt10.46□□□□□ -0.73
PKR1Q03880 MEP2YNL142W 1500 nt10.45□□□□□ -0.74
PKR1Q03880 tP(UGG)O3tP(UGG)O3 72 nt10.43□□□□□ -0.74
PKR1Q03880 SSA1YAL005C 1929 nt10.37□□□□□ -0.75
PKR1Q03880 RPN10YHR200W 807 nt10.27□□□□□ -0.77
PKR1Q03880 NAB2YGL122C 1578 nt10.26□□□□□ -0.77
PKR1Q03880 PET122YER153C 765 nt10.26□□□□□ -0.77
PKR1Q03880 PUN1YLR414C 792 nt10.26□□□□□ -0.77
PKR1Q03880 PTC2YER089C 1395 nt10.26□□□□□ -0.77
PKR1Q03880 DCW1YKL046C 1350 nt10.25□□□□□ -0.77
PKR1Q03880 DEP1YAL013W 1218 nt10.24□□□□□ -0.77
PKR1Q03880 YBR220CYBR220C 1683 nt10.24□□□□□ -0.77
PKR1Q03880 YDJ1YNL064C 1230 nt10.15□□□□□ -0.78
PKR1Q03880 YJL225CYJL225C 5277 nt10.14□□□□□ -0.79
PKR1Q03880 YNL208WYNL208W 600 nt10.14□□□□□ -0.79
PKR1Q03880 FIS1YIL065C 468 nt10.13□□□□□ -0.79
PKR1Q03880 SCR1SCR1 522 nt10.13□□□□□ -0.79
PKR1Q03880 GUT2YIL155C 1950 nt10.09□□□□□ -0.79
PKR1Q03880 PCH2YBR186W 1695 nt10.09□□□□□ -0.79
PKR1Q03880 EMI2YDR516C 1503 nt10.07□□□□□ -0.8
PKR1Q03880 YPS1YLR120C 1710 nt10.04□□□□□ -0.8
PKR1Q03880 SDH1YKL148C 1923 nt10□□□□□ -0.81
PKR1Q03880 YJR018WYJR018W 363 nt10□□□□□ -0.81
PKR1Q03880 YMR090WYMR090W 684 nt10□□□□□ -0.81
PKR1Q03880 PIB2YGL023C 1908 nt9.99□□□□□ -0.81
PKR1Q03880 SEC11YIR022W 504 nt9.97□□□□□ -0.81
PKR1Q03880 DAL1YIR027C 1383 nt9.97□□□□□ -0.81
PKR1Q03880 UME6YDR207C 2511 nt9.96□□□□□ -0.82
PKR1Q03880 YDL221WYDL221W 552 nt9.94□□□□□ -0.82
PKR1Q03880 RRN5YLR141W 1092 nt9.94□□□□□ -0.82
PKR1Q03880 GAR1YHR089C 618 nt9.92□□□□□ -0.82
PKR1Q03880 PHO4YFR034C 939 nt9.9□□□□□ -0.82
PKR1Q03880 YHR165W-AYHR165W-A 312 nt9.87□□□□□ -0.83
PKR1Q03880 YDR095CYDR095C 411 nt9.86□□□□□ -0.83
PKR1Q03880 YJR120WYJR120W 351 nt9.81□□□□□ -0.84
PKR1Q03880 RDN37-1RDN37-1 5354 nt9.79□□□□□ -0.84
PKR1Q03880 RDN37-2RDN37-2 5354 nt9.79□□□□□ -0.84
PKR1Q03880 FPR4YLR449W 1179 nt9.79□□□□□ -0.84
PKR1Q03880 CAC2YML102W 1407 nt9.79□□□□□ -0.84
PKR1Q03880 SCC4YER147C 1875 nt9.78□□□□□ -0.84
PKR1Q03880 PTP1YDL230W 1008 nt9.76□□□□□ -0.85
PKR1Q03880 INM2YDR287W 879 nt9.75□□□□□ -0.85
PKR1Q03880 YER088W-BYER088W-B 147 nt9.74□□□□□ -0.85
PKR1Q03880 RTF1YGL244W 1677 nt9.72□□□□□ -0.85
PKR1Q03880 ATS1YAL020C 1002 nt9.72□□□□□ -0.85
PKR1Q03880 IRC15YPL017C 1500 nt9.68□□□□□ -0.86
PKR1Q03880 RPP2BYDR382W 333 nt9.68□□□□□ -0.86
PKR1Q03880 Q0182Q0182 405 nt9.66□□□□□ -0.86
PKR1Q03880 YSC84YHR016C 1407 nt9.65□□□□□ -0.86
PKR1Q03880 PTK1YKL198C 1989 nt9.64□□□□□ -0.87
PKR1Q03880 YHL050CYHL050C 2094 nt9.63□□□□□ -0.87
PKR1Q03880 TIR1YER011W 765 nt9.63□□□□□ -0.87
PKR1Q03880 RSB1YOR049C 1065 nt9.62□□□□□ -0.87
PKR1Q03880 BOR1YNL275W 1731 nt9.62□□□□□ -0.87
PKR1Q03880 RPP2AYOL039W 321 nt9.61□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms