RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	GPI8	P49018	411 aa		5.71	□□□□□ -1.5
PXA1	YPL147W	VMS1	Q04311	632 aa	Known RBP	5.71	□□□□□ -1.5
PXA1	YPL147W	AIM20	P40451	204 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	YNL247W	P53852	767 aa	Known RBP	5.7	□□□□□ -1.5
PXA1	YPL147W	ALD3	P54114	506 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	RSC2	Q06488	889 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	CLN1	P20437	546 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	BFA1	P47113	574 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	GGA1	Q06336	557 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	PCL8	Q08966	492 aa		5.7	□□□□□ -1.5
PXA1	YPL147W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	RIP-Chip
PXA1	YPL147W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
PXA1	YPL147W	BYE1	P36106	594 aa		5.69	□□□□□ -1.5
PXA1	YPL147W	MEP1	P40260	492 aa		5.69	□□□□□ -1.5
PXA1	YPL147W	JIP5	Q06214	492 aa	Predicted RBP	5.69	□□□□□ -1.5
PXA1	YPL147W	YRM1	Q12340	786 aa		5.69	□□□□□ -1.5
PXA1	YPL147W	MRF1	P30775	413 aa	Predicted RBP	5.69	□□□□□ -1.5
PXA1	YPL147W	CDC3	P32457	520 aa	Known RBP	5.69	□□□□□ -1.5
PXA1	YPL147W	STM1	P39015	273 aa	Known RBP	5.69	□□□□□ -1.5
PXA1	YPL147W	MGA2	P40578	1113 aa		5.69	□□□□□ -1.5
PXA1	YPL147W	RRP15	Q06511	250 aa	Predicted RBP	5.68	□□□□□ -1.5
PXA1	YPL147W	CDC31	P06704	161 aa	Known RBP	5.68	□□□□□ -1.5
PXA1	YPL147W	SPT21	P35209	758 aa		5.68	□□□□□ -1.5
PXA1	YPL147W	MSH4	P40965	878 aa	Predicted RBP	5.68	□□□□□ -1.5
PXA1	YPL147W	POB3	Q04636	552 aa	Known RBP	5.68	□□□□□ -1.5
PXA1	YPL147W	YMR074C	Q04773	145 aa		5.68	□□□□□ -1.5
PXA1	YPL147W	VPS5	Q92331	675 aa		5.68	□□□□□ -1.5
PXA1	YPL147W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
PXA1	YPL147W	JNM1	P36224	373 aa		5.67	□□□□□ -1.5
PXA1	YPL147W	RTF1	P53064	558 aa		5.67	□□□□□ -1.5
PXA1	YPL147W	VMA1	P17255	1071 aa	Known RBP	5.67	□□□□□ -1.5
PXA1	YPL147W	REB1	P21538	810 aa		5.67	□□□□□ -1.5
PXA1	YPL147W	CCM1	P48237	864 aa	Predicted RBP	5.67	□□□□□ -1.5
PXA1	YPL147W	YNR021W	P53723	404 aa	Known RBP	5.67	□□□□□ -1.5
PXA1	YPL147W	YVC1	Q12324	675 aa		5.67	□□□□□ -1.5
PXA1	YPL147W	MPH3	P0CE00	602 aa		5.66	□□□□□ -1.5
PXA1	YPL147W	NFU1	P32860	256 aa		5.66	□□□□□ -1.5
PXA1	YPL147W	RPC37	P36121	282 aa		5.66	□□□□□ -1.5
PXA1	YPL147W	FAF1	P40546	346 aa	Predicted RBP	5.66	□□□□□ -1.5
PXA1	YPL147W	PES4	P39684	611 aa		5.66	□□□□□ -1.5
PXA1	YPL147W	YCK3	P39962	524 aa		5.66	□□□□□ -1.5
PXA1	YPL147W	RTT106	P40161	455 aa		5.66	□□□□□ -1.5
PXA1	YPL147W	SXM1	Q04175	944 aa	Known RBP	5.66	□□□□□ -1.5
PXA1	YPL147W	PPX1	P38698	397 aa		5.65	□□□□□ -1.5
PXA1	YPL147W	VPS70	P47161	811 aa		5.65	□□□□□ -1.5
PXA1	YPL147W	VTI1	Q04338	217 aa		5.65	□□□□□ -1.5
PXA1	YPL147W	COG8	Q04632	607 aa		5.65	□□□□□ -1.5
PXA1	YPL147W	YOL098C	Q12496	1037 aa		5.65	□□□□□ -1.5
PXA1	YPL147W	NOP14	Q99207	810 aa	Known RBP	5.65	□□□□□ -1.5
PXA1	YPL147W	YBT1	P32386	1661 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	SPS1	P08458	490 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	TRX2	P22803	104 aa	Known RBP	5.65	□□□□□ -1.51
PXA1	YPL147W	LTV1	P34078	463 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	IES2	P40154	320 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	THI12	P42883	340 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	THI5	P43534	340 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	THI11	P47183	340 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	THI13	Q07748	340 aa		5.65	□□□□□ -1.51
PXA1	YPL147W	RTG2	P32608	588 aa	Known RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	SEC6	P32844	805 aa		5.64	□□□□□ -1.51
PXA1	YPL147W	RSC8	P43609	557 aa	Known RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	ISA1	Q07821	250 aa	Predicted RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	GYP7	P48365	746 aa		5.64	□□□□□ -1.51
PXA1	YPL147W	ELA1	P53861	379 aa	Predicted RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	YLR326W	Q06170	240 aa	Known RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	CLP1	Q08685	445 aa	Predicted RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	RUD3	Q12234	484 aa	Known RBP	5.64	□□□□□ -1.51
PXA1	YPL147W	THS1	P04801	734 aa	Known RBP	5.63	□□□□□ -1.51
PXA1	YPL147W	SRP40	P32583	406 aa	Predicted RBP	5.63	□□□□□ -1.51
PXA1	YPL147W	YNL058C	P53947	316 aa		5.63	□□□□□ -1.51
PXA1	YPL147W	RPN7	Q06103	429 aa	Known RBP	5.63	□□□□□ -1.51
PXA1	YPL147W	MAK16	P10962	306 aa	Predicted RBP	5.63	□□□□□ -1.51
PXA1	YPL147W	SIT4	P20604	311 aa		5.63	□□□□□ -1.51
PXA1	YPL147W	YHR218W	P38899	603 aa		5.63	□□□□□ -1.51
PXA1	YPL147W	KAR5	Q04746	504 aa		5.63	□□□□□ -1.51
PXA1	YPL147W	YSP2	Q06681	1438 aa		5.63	□□□□□ -1.51
PXA1	YPL147W	INH1	P01097	85 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	VPS24	P36095	224 aa	Known RBP	5.62	□□□□□ -1.51
PXA1	YPL147W	BNI4	P53858	892 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	SVF1	Q05515	481 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	MDM38	Q08179	573 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	YGR161W-C	Q3E744	92 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	NUP188	P52593	1655 aa	Known RBP	5.62	□□□□□ -1.51
PXA1	YPL147W	GLC3	P32775	704 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	FUI1	P38196	639 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	SEN54	Q02825	467 aa	Predicted RBP	5.62	□□□□□ -1.51
PXA1	YPL147W	MTC5	Q03897	1148 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	YOR389W	Q08912	624 aa		5.62	□□□□□ -1.51
PXA1	YPL147W	YKL091C	P33324	310 aa	Known RBP	5.61	□□□□□ -1.51
PXA1	YPL147W	PEX5	P35056	612 aa		5.61	□□□□□ -1.51
PXA1	YPL147W	VMR1	P38735	1592 aa		5.61	□□□□□ -1.51
PXA1	YPL147W	ALG12	P53730	551 aa		5.61	□□□□□ -1.51
PXA1	YPL147W	YEF3	P16521	1044 aa	Known RBP	5.61	□□□□□ -1.51
PXA1	YPL147W	RPC82	P32349	654 aa		5.61	□□□□□ -1.51
PXA1	YPL147W	GUA1	P38625	525 aa	Known RBP	5.61	□□□□□ -1.51
PXA1	YPL147W	MXR1	P40029	184 aa		5.61	□□□□□ -1.51
PXA1	YPL147W	BDP1	P46678	594 aa		5.61	□□□□□ -1.51
PXA1	YPL147W	RIX7	Q07844	837 aa	Known RBP	5.61	□□□□□ -1.51
PXA1	YPL147W	LSP1	Q12230	341 aa	Known RBP	5.61	□□□□□ -1.51
PXA1	YPL147W	EFB1	P32471	206 aa	Known RBP	5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms