RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C PMD1P32634 1753 aa9.36□□□□□ -0.91
UME1YPL139C ERT1P38140 529 aa9.36□□□□□ -0.91
UME1YPL139C ARG8P18544 423 aa9.35□□□□□ -0.91
UME1YPL139C PRD1P25375 712 aa9.35□□□□□ -0.91
UME1YPL139C RTR1P40084 226 aaPredicted RBP9.34□□□□□ -0.91
UME1YPL139C CWH41P53008 833 aa9.34□□□□□ -0.91
UME1YPL139C YGL082WP53155 381 aa9.34□□□□□ -0.91
UME1YPL139C THI22Q06490 572 aa9.34□□□□□ -0.91
UME1YPL139C SMY1P32364 656 aaKnown RBP9.33□□□□□ -0.92
UME1YPL139C ZDS2P54786 942 aa9.33□□□□□ -0.92
UME1YPL139C CTT1P06115 562 aa9.32□□□□□ -0.92
UME1YPL139C SER1P33330 395 aaKnown RBP9.32□□□□□ -0.92
UME1YPL139C XDJ1P39102 459 aa9.32□□□□□ -0.92
UME1YPL139C YER156CP40093 338 aaKnown RBP9.32□□□□□ -0.92
UME1YPL139C YNL050CP53952 270 aa9.32□□□□□ -0.92
UME1YPL139C YDL129WQ07555 291 aa9.32□□□□□ -0.92
UME1YPL139C PHM7Q12252 991 aa9.32□□□□□ -0.92
UME1YPL139C APL2P36000 726 aaPredicted RBP9.31□□□□□ -0.92
UME1YPL139C CAF20P12962 161 aaKnown RBP9.3□□□□□ -0.92
UME1YPL139C UGA3P26370 528 aa9.3□□□□□ -0.92
UME1YPL139C MPP10P47083 593 aaKnown RBP9.3□□□□□ -0.92
UME1YPL139C DAN4P47179 1161 aa9.3□□□□□ -0.92
UME1YPL139C RTT109Q07794 436 aa9.3□□□□□ -0.92
UME1YPL139C YPR204WQ08995 1032 aa9.3□□□□□ -0.92
UME1YPL139C COQ4O13525 335 aa9.29□□□□□ -0.92
UME1YPL139C YKL222CP35995 705 aa9.29□□□□□ -0.92
UME1YPL139C SQS1P53866 767 aaKnown RBP9.29□□□□□ -0.92
UME1YPL139C LPD1P09624 499 aaKnown RBP9.28□□□□□ -0.92
UME1YPL139C YFR016CP43597 1233 aaKnown RBP9.28□□□□□ -0.92
UME1YPL139C TOM1Q03280 3268 aa9.28□□□□□ -0.92
UME1YPL139C LYS2P07702 1392 aa9.28□□□□□ -0.92
UME1YPL139C YBR287WP38355 427 aa9.27□□□□□ -0.93
UME1YPL139C RGA1P39083 1007 aa9.27□□□□□ -0.93
UME1YPL139C PFF1P38244 976 aa9.26□□□□□ -0.93
UME1YPL139C HEF3P53978 1044 aaKnown RBP9.26□□□□□ -0.93
UME1YPL139C SSP2Q08646 371 aa9.26□□□□□ -0.93
UME1YPL139C RRT14P40470 206 aa9.25□□□□□ -0.93
UME1YPL139C MDG1P53885 366 aa9.25□□□□□ -0.93
UME1YPL139C JIP4Q03361 876 aa9.25□□□□□ -0.93
UME1YPL139C BMS1Q08965 1183 aaKnown RBP9.25□□□□□ -0.93
UME1YPL139C IOC4Q04213 475 aa9.24□□□□□ -0.93
UME1YPL139C NSE3Q05541 303 aa9.24□□□□□ -0.93
UME1YPL139C ZDS1P50111 915 aaKnown RBP9.24□□□□□ -0.93
UME1YPL139C RAT1Q02792 1006 aaKnown RBP9.24□□□□□ -0.93
UME1YPL139C VPS64Q03944 604 aa9.24□□□□□ -0.93
UME1YPL139C BDF2Q07442 638 aa9.24□□□□□ -0.93
UME1YPL139C UBP16Q02863 499 aa9.23□□□□□ -0.93
UME1YPL139C YDL144CQ07589 356 aa9.23□□□□□ -0.93
UME1YPL139C SAM3Q08986 587 aa9.23□□□□□ -0.93
UME1YPL139C MRM1P25270 412 aa9.22□□□□□ -0.93
UME1YPL139C ICL1P28240 557 aaPredicted RBP9.22□□□□□ -0.93
UME1YPL139C VRP1P37370 817 aa9.22□□□□□ -0.93
UME1YPL139C ERO1Q03103 563 aa9.22□□□□□ -0.93
UME1YPL139C FCP1Q03254 732 aa9.22□□□□□ -0.93
UME1YPL139C SWI1P09547 1314 aa9.21□□□□□ -0.94
UME1YPL139C TOP1P04786 769 aa9.21□□□□□ -0.94
UME1YPL139C TPD3P31383 635 aa9.21□□□□□ -0.94
UME1YPL139C VMA1P17255 1071 aaKnown RBP9.2□□□□□ -0.94
UME1YPL139C MAM1P40065 302 aa9.2□□□□□ -0.94
UME1YPL139C SSA4P22202 642 aaKnown RBP9.19□□□□□ -0.94
UME1YPL139C GYP7P48365 746 aa9.19□□□□□ -0.94
UME1YPL139C PUS5Q06244 254 aa9.19□□□□□ -0.94
UME1YPL139C YOL057WQ08225 711 aa9.19□□□□□ -0.94
UME1YPL139C SRT1Q03175 343 aa9.18□□□□□ -0.94
UME1YPL139C IRC3Q06683 689 aa9.18□□□□□ -0.94
UME1YPL139C FIG2P25653 1609 aa9.17□□□□□ -0.94
UME1YPL139C YMR1P47147 688 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
UME1YPL139C YGR122WP53272 402 aa9.17□□□□□ -0.94
UME1YPL139C YDR306CQ06640 478 aa9.17□□□□□ -0.94
UME1YPL139C SSK22P25390 1331 aaPredicted RBP9.16□□□□□ -0.94
UME1YPL139C SIT4P20604 311 aa9.16□□□□□ -0.94
UME1YPL139C DBP1P24784 617 aaKnown RBP9.16□□□□□ -0.94
UME1YPL139C YLR271WQ06152 274 aa9.16□□□□□ -0.94
UME1YPL139C SUI2P20459 304 aaKnown RBP9.15□□□□□ -0.94
UME1YPL139C FRD1P32614 470 aaKnown RBP9.15□□□□□ -0.94
UME1YPL139C FPK1P53739 893 aa9.15□□□□□ -0.94
UME1YPL139C HAT1Q12341 374 aa9.15□□□□□ -0.94
UME1YPL139C HKR1P41809 1802 aa9.15□□□□□ -0.95
UME1YPL139C GAP1P19145 602 aaPredicted RBP9.14□□□□□ -0.95
UME1YPL139C RPN1P38764 993 aaKnown RBP9.14□□□□□ -0.95
UME1YPL139C ATG20Q07528 640 aa9.14□□□□□ -0.95
UME1YPL139C FAS2P19097 1887 aaKnown RBP9.14□□□□□ -0.95
UME1YPL139C RET1P22276 1149 aaKnown RBP9.13□□□□□ -0.95
UME1YPL139C SLI15P38283 698 aa9.13□□□□□ -0.95
UME1YPL139C DIB1Q06819 143 aaPredicted RBP9.13□□□□□ -0.95
UME1YPL139C YLR278CQ05854 1341 aa9.13□□□□□ -0.95
UME1YPL139C THS1P04801 734 aaKnown RBP9.12□□□□□ -0.95
UME1YPL139C YKU70P32807 602 aa9.12□□□□□ -0.95
UME1YPL139C SHC1P39000 512 aa9.12□□□□□ -0.95
UME1YPL139C RRD1P40454 393 aaKnown RBP9.12□□□□□ -0.95
UME1YPL139C SYF1Q04048 859 aaPredicted RBP9.12□□□□□ -0.95
UME1YPL139C NUP133P36161 1157 aa9.12□□□□□ -0.95
UME1YPL139C HXT10P43581 546 aa9.12□□□□□ -0.95
UME1YPL139C PKH1Q03407 766 aa9.12□□□□□ -0.95
UME1YPL139C SAS4Q04003 481 aa9.12□□□□□ -0.95
UME1YPL139C SWC3P31376 625 aa9.11□□□□□ -0.95
UME1YPL139C CST6P40535 587 aa9.11□□□□□ -0.95
UME1YPL139C YJR008WP47085 338 aa9.11□□□□□ -0.95
UME1YPL139C DNM1P54861 757 aa9.11□□□□□ -0.95
UME1YPL139C GRX6Q12438 231 aa9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms