RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C YNL035CP53962 389 aaKnown RBP2.46□□□□□ -2.02
UBP2YOR124C YPP1P46951 817 aa2.46□□□□□ -2.02
UBP2YOR124C POL31P46957 487 aa2.46□□□□□ -2.02
UBP2YOR124C HGH1P48362 394 aaKnown RBP2.46□□□□□ -2.02
UBP2YOR124C PRP43P53131 767 aaKnown RBP2.46□□□□□ -2.02
UBP2YOR124C RPS19AP07280 144 aaKnown RBP2.46□□□□□ -2.02
UBP2YOR124C RPS19BP07281 144 aaPredicted RBP2.46□□□□□ -2.02
UBP2YOR124C RSC1P53236 928 aa2.46□□□□□ -2.02
UBP2YOR124C ORM2Q06144 216 aa2.46□□□□□ -2.02
UBP2YOR124C SPE2P21182 396 aa2.45□□□□□ -2.02
UBP2YOR124C RFT1P38206 574 aaPredicted RBP2.45□□□□□ -2.02
UBP2YOR124C RVS167P39743 482 aaKnown RBP2.45□□□□□ -2.02
UBP2YOR124C RAD26P40352 1085 aa2.45□□□□□ -2.02
UBP2YOR124C MAL13P53338 473 aa2.45□□□□□ -2.02
UBP2YOR124C RAD3P06839 778 aa2.45□□□□□ -2.02
UBP2YOR124C MRC1P25588 1096 aa2.45□□□□□ -2.02
UBP2YOR124C MPP10P47083 593 aaKnown RBP2.45□□□□□ -2.02
UBP2YOR124C NPA3P47122 385 aa2.45□□□□□ -2.02
UBP2YOR124C ECM23Q02710 187 aa2.45□□□□□ -2.02
UBP2YOR124C VTC3Q02725 835 aa2.45□□□□□ -2.02
UBP2YOR124C YOR238WQ08634 303 aa2.45□□□□□ -2.02
UBP2YOR124C SET1P38827 1080 aaKnown RBP2.45□□□□□ -2.02
UBP2YOR124C TPM2P40414 161 aa2.45□□□□□ -2.02
UBP2YOR124C TAN1P53072 289 aaPredicted RBP2.45□□□□□ -2.02
UBP2YOR124C RNT1Q02555 471 aa2.45□□□□□ -2.02
UBP2YOR124C FIG2P25653 1609 aa2.45□□□□□ -2.02
UBP2YOR124C KEX2P13134 814 aa2.44□□□□□ -2.02
UBP2YOR124C DLD1P32891 587 aa2.44□□□□□ -2.02
UBP2YOR124C DDP1Q99321 188 aaKnown RBP2.44□□□□□ -2.02
UBP2YOR124C HSP82P02829 709 aaKnown RBP2.44□□□□□ -2.02
UBP2YOR124C MUD2P36084 527 aaKnown RBP2.44□□□□□ -2.02
UBP2YOR124C SAP190P36123 1033 aa2.44□□□□□ -2.02
UBP2YOR124C YAP5P40574 245 aa2.44□□□□□ -2.02
UBP2YOR124C RRP15Q06511 250 aaPredicted RBP2.44□□□□□ -2.02
UBP2YOR124C FUN12P39730 1002 aaKnown RBP2.44□□□□□ -2.02
UBP2YOR124C GTT3P39996 337 aa2.44□□□□□ -2.02
UBP2YOR124C CWC22P53333 577 aaKnown RBP2.44□□□□□ -2.02
UBP2YOR124C YNL011CP53980 444 aa2.44□□□□□ -2.02
UBP2YOR124C NOP8Q08287 484 aaPredicted RBP2.44□□□□□ -2.02
UBP2YOR124C ATG9Q12142 997 aa2.44□□□□□ -2.02
UBP2YOR124C YPL150WQ12152 901 aa2.44□□□□□ -2.02
UBP2YOR124C YRF1-3P0CX14 1859 aa2.43□□□□□ -2.02
UBP2YOR124C YRF1-7P0CX15 1859 aa2.43□□□□□ -2.02
UBP2YOR124C YRF1-6P53819 1859 aa2.43□□□□□ -2.02
UBP2YOR124C TAF5P38129 798 aa2.43□□□□□ -2.02
UBP2YOR124C STS1P38637 319 aa2.43□□□□□ -2.02
UBP2YOR124C PPX1P38698 397 aa2.43□□□□□ -2.02
UBP2YOR124C ALD4P46367 519 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C COG4Q06096 861 aa2.43□□□□□ -2.02
UBP2YOR124C LEU3P08638 886 aa2.43□□□□□ -2.02
UBP2YOR124C DBP1P24784 617 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C ILV3P39522 585 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C AIM9P40053 627 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C RIO2P40160 425 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C INP2Q03824 705 aa2.43□□□□□ -2.02
UBP2YOR124C MAK21Q12176 1025 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C SEC39Q12745 709 aa2.43□□□□□ -2.02
UBP2YOR124C RAD51P25454 400 aa2.43□□□□□ -2.02
UBP2YOR124C RPL5P26321 297 aaKnown RBP2.43□□□□□ -2.02
UBP2YOR124C RSM25P40496 264 aa2.43□□□□□ -2.02
UBP2YOR124C RTT109Q07794 436 aa2.43□□□□□ -2.02
UBP2YOR124C RPL22AP05749 121 aaKnown RBP2.42□□□□□ -2.02
UBP2YOR124C YJR008WP47085 338 aa2.42□□□□□ -2.02
UBP2YOR124C CWH41P53008 833 aa2.42□□□□□ -2.02
UBP2YOR124C PUF6Q04373 656 aaKnown RBP2.42□□□□□ -2.02
UBP2YOR124C YBL029C-AQ3E756 94 aa2.42□□□□□ -2.02
UBP2YOR124C RRP1P35178 278 aaPredicted RBP2.42□□□□□ -2.02
UBP2YOR124C RTT107P38850 1070 aa2.42□□□□□ -2.02
UBP2YOR124C CTK3P46963 296 aaPredicted RBP2.42□□□□□ -2.02
UBP2YOR124C NCS2P53923 493 aaPredicted RBP2.42□□□□□ -2.02
UBP2YOR124C ORC1P54784 914 aaPredicted RBP2.42□□□□□ -2.02
UBP2YOR124C YMR102CQ03177 834 aa2.42□□□□□ -2.02
UBP2YOR124C FPR4Q06205 392 aaPredicted RBP2.42□□□□□ -2.02
UBP2YOR124C RNR2P09938 399 aaKnown RBP2.42□□□□□ -2.02
UBP2YOR124C CYC8P14922 966 aa2.42□□□□□ -2.02
UBP2YOR124C ATE1P16639 503 aa2.42□□□□□ -2.02
UBP2YOR124C MRPL10P36520 322 aa2.42□□□□□ -2.02
UBP2YOR124C VNX1P42839 908 aa2.42□□□□□ -2.02
UBP2YOR124C PXR1P53335 271 aaPredicted RBP2.42□□□□□ -2.02
UBP2YOR124C COG8Q04632 607 aa2.42□□□□□ -2.02
UBP2YOR124C ERV41Q04651 352 aa2.42□□□□□ -2.02
UBP2YOR124C NKP2Q06162 153 aa2.42□□□□□ -2.02
UBP2YOR124C NPR3P38742 1146 aa2.41□□□□□ -2.02
UBP2YOR124C ALF1P53904 254 aa2.41□□□□□ -2.02
UBP2YOR124C YEL043WP32618 956 aa2.41□□□□□ -2.02
UBP2YOR124C GRX4P32642 244 aa2.41□□□□□ -2.02
UBP2YOR124C GLC3P32775 704 aa2.41□□□□□ -2.02
UBP2YOR124C BRN1P38170 754 aa2.41□□□□□ -2.02
UBP2YOR124C EDS1P38073 919 aa2.41□□□□□ -2.02
UBP2YOR124C YGL082WP53155 381 aa2.41□□□□□ -2.02
UBP2YOR124C ESC2Q06340 456 aa2.41□□□□□ -2.02
UBP2YOR124C PEX19Q07418 342 aa2.41□□□□□ -2.02
UBP2YOR124C TRP5P00931 707 aaKnown RBP2.4□□□□□ -2.02
UBP2YOR124C TTI1P36097 1038 aa2.4□□□□□ -2.02
UBP2YOR124C VPS41P38959 992 aa2.4□□□□□ -2.02
UBP2YOR124C RTR1P40084 226 aaPredicted RBP2.4□□□□□ -2.02
UBP2YOR124C MSH4P40965 878 aaPredicted RBP2.4□□□□□ -2.02
UBP2YOR124C YGL140CP53120 1219 aa2.4□□□□□ -2.02
UBP2YOR124C YML119WQ03208 357 aa2.4□□□□□ -2.02
UBP2YOR124C PRP3Q03338 469 aaPredicted RBP2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms