RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W BDP1P46678 594 aa6.87□□□□□ -1.31
VPS5YOR069W ETT1Q08421 412 aaKnown RBP6.87□□□□□ -1.31
VPS5YOR069W FRS2P15625 503 aaKnown RBP6.86□□□□□ -1.31
VPS5YOR069W PRP31P49704 494 aaPredicted RBP6.86□□□□□ -1.31
VPS5YOR069W MRC1P25588 1096 aa6.86□□□□□ -1.31
VPS5YOR069W YGL140CP53120 1219 aa6.86□□□□□ -1.31
VPS5YOR069W MRS2Q01926 470 aa6.86□□□□□ -1.31
VPS5YOR069W MSB4Q12317 492 aa6.86□□□□□ -1.31
VPS5YOR069W MBR1P23493 339 aa6.85□□□□□ -1.31
VPS5YOR069W PRX1P34227 261 aaKnown RBP6.85□□□□□ -1.31
VPS5YOR069W PEX14P53112 341 aa6.85□□□□□ -1.31
VPS5YOR069W SGD1Q06132 899 aa6.85□□□□□ -1.31
VPS5YOR069W GCD7P32502 381 aaPredicted RBP6.84□□□□□ -1.31
VPS5YOR069W RAD24P32641 659 aa6.84□□□□□ -1.31
VPS5YOR069W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
VPS5YOR069W YGL082WP53155 381 aa6.84□□□□□ -1.31
VPS5YOR069W SML1Q04964 104 aa6.84□□□□□ -1.31
VPS5YOR069W NOP8Q08287 484 aaPredicted RBP6.84□□□□□ -1.31
VPS5YOR069W BMS1Q08965 1183 aaKnown RBP6.84□□□□□ -1.31
VPS5YOR069W DUR1,2P32528 1835 aaKnown RBP6.84□□□□□ -1.31
VPS5YOR069W NTH2P35172 780 aa6.84□□□□□ -1.31
VPS5YOR069W VPS41P38959 992 aa6.84□□□□□ -1.31
VPS5YOR069W DPS1P04802 557 aaKnown RBP6.83□□□□□ -1.32
VPS5YOR069W RPS24AP0CX31 135 aaKnown RBP6.83□□□□□ -1.32
VPS5YOR069W RPS24BP0CX32 135 aaKnown RBP6.83□□□□□ -1.32
VPS5YOR069W YGR122WP53272 402 aa6.83□□□□□ -1.32
VPS5YOR069W YMR102CQ03177 834 aa6.83□□□□□ -1.32
VPS5YOR069W TLG2Q08144 397 aa6.83□□□□□ -1.32
VPS5YOR069W YKL068W-AQ3E826 78 aa6.83□□□□□ -1.32
VPS5YOR069W YOL087CQ99247 1116 aa6.83□□□□□ -1.32
VPS5YOR069W GDT1P38301 280 aaPredicted RBP6.83□□□□□ -1.32
VPS5YOR069W RTT107P38850 1070 aa6.83□□□□□ -1.32
VPS5YOR069W CTH1P47976 325 aa6.83□□□□□ -1.32
VPS5YOR069W COQ4O13525 335 aa6.82□□□□□ -1.32
VPS5YOR069W PET111P08468 800 aa6.82□□□□□ -1.32
VPS5YOR069W MSH1P25846 959 aa6.82□□□□□ -1.32
VPS5YOR069W CPS1P27614 576 aa6.82□□□□□ -1.32
VPS5YOR069W TTI1P36097 1038 aa6.82□□□□□ -1.32
VPS5YOR069W RMD1Q03441 430 aa6.82□□□□□ -1.32
VPS5YOR069W AIM9P40053 627 aaKnown RBP6.81□□□□□ -1.32
VPS5YOR069W RIA1P53893 1110 aa6.81□□□□□ -1.32
VPS5YOR069W FAP1P53971 965 aa6.81□□□□□ -1.32
VPS5YOR069W COG4Q06096 861 aa6.81□□□□□ -1.32
VPS5YOR069W GIN4Q12263 1142 aa6.81□□□□□ -1.32
VPS5YOR069W DDP1Q99321 188 aaKnown RBP6.81□□□□□ -1.32
VPS5YOR069W APC1P53886 1748 aa6.81□□□□□ -1.32
VPS5YOR069W AAP1P37898 856 aaKnown RBP6.81□□□□□ -1.32
VPS5YOR069W CTF18P49956 741 aa6.81□□□□□ -1.32
VPS5YOR069W CTI6Q08923 506 aa6.81□□□□□ -1.32
VPS5YOR069W RIM20Q12033 661 aa6.81□□□□□ -1.32
VPS5YOR069W TSR3Q12094 313 aaKnown RBP6.81□□□□□ -1.32
VPS5YOR069W ENT3P47160 408 aa6.8□□□□□ -1.32
VPS5YOR069W SRC1Q03707 834 aa6.8□□□□□ -1.32
VPS5YOR069W RPN7Q06103 429 aaKnown RBP6.8□□□□□ -1.32
VPS5YOR069W SWC3P31376 625 aa6.79□□□□□ -1.32
VPS5YOR069W OSW7P43611 510 aa6.79□□□□□ -1.32
VPS5YOR069W CPA2P03965 1118 aaKnown RBP6.79□□□□□ -1.32
VPS5YOR069W RDS1P25611 832 aa6.79□□□□□ -1.32
VPS5YOR069W VMS1Q04311 632 aaKnown RBP6.79□□□□□ -1.32
VPS5YOR069W GPA1P08539 472 aa6.78□□□□□ -1.32
VPS5YOR069W SIC1P38634 284 aa6.78□□□□□ -1.32
VPS5YOR069W RRM3P38766 723 aa6.78□□□□□ -1.32
VPS5YOR069W BOI2P39969 1040 aa6.78□□□□□ -1.32
VPS5YOR069W FYV10P40492 516 aa6.78□□□□□ -1.32
VPS5YOR069W HGH1P48362 394 aaKnown RBP6.78□□□□□ -1.32
VPS5YOR069W PRP3Q03338 469 aaPredicted RBP6.78□□□□□ -1.32
VPS5YOR069W GYL1Q04322 720 aa6.78□□□□□ -1.32
VPS5YOR069W TY1B-NL2Q99337 1749 aaKnown RBP6.78□□□□□ -1.32
VPS5YOR069W TPM1P17536 199 aaKnown RBP6.77□□□□□ -1.32
VPS5YOR069W PET123P17558 318 aa6.77□□□□□ -1.32
VPS5YOR069W YER130CP39959 443 aa6.77□□□□□ -1.32
VPS5YOR069W MVP1P40959 511 aaKnown RBP6.77□□□□□ -1.32
VPS5YOR069W PSH1Q12161 406 aa6.77□□□□□ -1.32
VPS5YOR069W MSH3P25336 1018 aa6.77□□□□□ -1.33
VPS5YOR069W HSP104P31539 908 aaKnown RBP6.77□□□□□ -1.33
VPS5YOR069W ECM21P38167 1117 aaKnown RBP6.77□□□□□ -1.33
VPS5YOR069W MSH4P40965 878 aaPredicted RBP6.77□□□□□ -1.33
VPS5YOR069W PRP43P53131 767 aaKnown RBP6.77□□□□□ -1.33
VPS5YOR069W WAR1Q03631 944 aa6.77□□□□□ -1.33
VPS5YOR069W MRP7P12687 371 aa6.76□□□□□ -1.33
VPS5YOR069W ARP5P53946 755 aa6.76□□□□□ -1.33
VPS5YOR069W ELG1Q12050 791 aa6.76□□□□□ -1.33
VPS5YOR069W TFC8Q12308 588 aa6.76□□□□□ -1.33
VPS5YOR069W PDR18P53756 1333 aa6.76□□□□□ -1.33
VPS5YOR069W TFG2P41896 400 aaPredicted RBP6.76□□□□□ -1.33
VPS5YOR069W BBC1P47068 1157 aa6.76□□□□□ -1.33
VPS5YOR069W RRB1Q04225 511 aaKnown RBP6.76□□□□□ -1.33
VPS5YOR069W AOS1Q06624 347 aa6.76□□□□□ -1.33
VPS5YOR069W YOL057WQ08225 711 aa6.76□□□□□ -1.33
VPS5YOR069W YPL150WQ12152 901 aa6.76□□□□□ -1.33
VPS5YOR069W ADE6P38972 1358 aaKnown RBP6.76□□□□□ -1.33
VPS5YOR069W PSE1P32337 1089 aaKnown RBP6.75□□□□□ -1.33
VPS5YOR069W SLD2P34252 453 aa6.75□□□□□ -1.33
VPS5YOR069W PCH2P38126 564 aa6.75□□□□□ -1.33
VPS5YOR069W MAL33P38157 468 aa6.75□□□□□ -1.33
VPS5YOR069W NOC2P39744 710 aaKnown RBP6.75□□□□□ -1.33
VPS5YOR069W SPO22P40511 975 aa6.75□□□□□ -1.33
VPS5YOR069W UBP10P53874 792 aaPredicted RBP6.75□□□□□ -1.33
VPS5YOR069W BRE1Q07457 700 aaKnown RBP6.75□□□□□ -1.33
VPS5YOR069W NCB2Q92317 146 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms