RNA–Protein interactions for RNA: YLR450W

HMG2, Transcript of HMG-CoA reductase, yeastyeast

Gene HMG2, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMG2YLR450W SPR3P41901 512 aa10.05□□□□□ -0.8
HMG2YLR450W SEC14P24280 304 aaKnown RBP10.04□□□□□ -0.8
HMG2YLR450W RAD50P12753 1312 aa10.04□□□□□ -0.8
HMG2YLR450W NPR3P38742 1146 aa10.04□□□□□ -0.8
HMG2YLR450W SAP1P39955 897 aaKnown RBP10.04□□□□□ -0.8
HMG2YLR450W UBX2Q04228 584 aa10.03□□□□□ -0.8
HMG2YLR450W SPO14P36126 1683 aa10.03□□□□□ -0.8
HMG2YLR450W RAD16P31244 790 aa10.03□□□□□ -0.8
HMG2YLR450W RKM3P38222 552 aa10.03□□□□□ -0.8
HMG2YLR450W WHI5Q12416 295 aa10.03□□□□□ -0.8
HMG2YLR450W YRB1P41920 201 aaKnown RBP10.02□□□□□ -0.8
HMG2YLR450W TLG2Q08144 397 aa10.02□□□□□ -0.8
HMG2YLR450W ELM1P32801 640 aa10.02□□□□□ -0.81
HMG2YLR450W MFT1P33441 392 aaKnown RBP10.02□□□□□ -0.81
HMG2YLR450W TAF1P46677 1066 aa10.02□□□□□ -0.81
HMG2YLR450W LSO1Q3E827 93 aa10.02□□□□□ -0.81
HMG2YLR450W GDB1Q06625 1536 aa10.02□□□□□ -0.81
HMG2YLR450W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
HMG2YLR450W SPO19Q03029 223 aa10.02□□□□□ -0.81
HMG2YLR450W YLR257WQ06146 321 aaKnown RBP10.02□□□□□ -0.81
HMG2YLR450W YDL144CQ07589 356 aa10.02□□□□□ -0.81
HMG2YLR450W SSA4P22202 642 aaKnown RBP10.01□□□□□ -0.81
HMG2YLR450W AOS1Q06624 347 aa10.01□□□□□ -0.81
HMG2YLR450W CIR2Q08822 631 aa10.01□□□□□ -0.81
HMG2YLR450W NKP1Q12493 238 aa10.01□□□□□ -0.81
HMG2YLR450W MIC60P36112 540 aa10□□□□□ -0.81
HMG2YLR450W HST2P53686 357 aa10□□□□□ -0.81
HMG2YLR450W YML119WQ03208 357 aa10□□□□□ -0.81
HMG2YLR450W EXO84P38261 753 aa10□□□□□ -0.81
HMG2YLR450W RIO2P40160 425 aaKnown RBP10□□□□□ -0.81
HMG2YLR450W YPL225WQ08971 146 aaKnown RBP10□□□□□ -0.81
HMG2YLR450W SEC27P41811 889 aaKnown RBP9.99□□□□□ -0.81
HMG2YLR450W MHP1P43638 1398 aa9.99□□□□□ -0.81
HMG2YLR450W CAT8P39113 1433 aa9.99□□□□□ -0.81
HMG2YLR450W ASF1P32447 279 aa9.99□□□□□ -0.81
HMG2YLR450W YME2P32843 850 aa9.99□□□□□ -0.81
HMG2YLR450W ATG26Q06321 1198 aa9.99□□□□□ -0.81
HMG2YLR450W SEC23P15303 768 aaKnown RBP9.98□□□□□ -0.81
HMG2YLR450W MSH1P25846 959 aa9.98□□□□□ -0.81
HMG2YLR450W CDC3P32457 520 aaKnown RBP9.98□□□□□ -0.81
HMG2YLR450W STU2P46675 888 aa9.98□□□□□ -0.81
HMG2YLR450W SUM1P46676 1062 aa9.98□□□□□ -0.81
HMG2YLR450W SYH1Q02875 849 aaKnown RBP9.98□□□□□ -0.81
HMG2YLR450W CDC45Q08032 650 aa9.98□□□□□ -0.81
HMG2YLR450W CEP3P40969 608 aa9.98□□□□□ -0.81
HMG2YLR450W ALD2P47771 506 aa9.98□□□□□ -0.81
HMG2YLR450W SWI6P09959 803 aa9.98□□□□□ -0.81
HMG2YLR450W RPL17AP05740 184 aaKnown RBP9.97□□□□□ -0.81
HMG2YLR450W BNI4P53858 892 aa9.97□□□□□ -0.81
HMG2YLR450W LAM6Q08001 693 aa9.97□□□□□ -0.81
HMG2YLR450W ERC1P38767 581 aa9.97□□□□□ -0.81
HMG2YLR450W YKL068W-AQ3E826 78 aa9.97□□□□□ -0.81
HMG2YLR450W RTC1Q08281 1341 aa9.96□□□□□ -0.81
HMG2YLR450W TIF3P34167 436 aaKnown RBP9.96□□□□□ -0.81
HMG2YLR450W YEL1P34225 687 aa9.96□□□□□ -0.81
HMG2YLR450W RFC1P38630 861 aaKnown RBP9.96□□□□□ -0.81
HMG2YLR450W VPS15P22219 1454 aa9.96□□□□□ -0.82
HMG2YLR450W SEC6P32844 805 aa9.96□□□□□ -0.82
HMG2YLR450W PRP31P49704 494 aaPredicted RBP9.96□□□□□ -0.82
HMG2YLR450W SHE4P51534 789 aa9.96□□□□□ -0.82
HMG2YLR450W GDE1Q02979 1223 aa9.96□□□□□ -0.82
HMG2YLR450W CYC8P14922 966 aa9.96□□□□□ -0.82
HMG2YLR450W BTN2P53286 410 aa9.96□□□□□ -0.82
HMG2YLR450W IST1P53843 298 aaPredicted RBP9.96□□□□□ -0.82
HMG2YLR450W YDR338CQ05497 695 aa9.96□□□□□ -0.82
HMG2YLR450W SLD2P34252 453 aa9.95□□□□□ -0.82
HMG2YLR450W RRP1P35178 278 aaPredicted RBP9.95□□□□□ -0.82
HMG2YLR450W CCM1P48237 864 aaPredicted RBP9.95□□□□□ -0.82
HMG2YLR450W BRE1Q07457 700 aaKnown RBP9.95□□□□□ -0.82
HMG2YLR450W PSK2Q08217 1101 aa9.95□□□□□ -0.82
HMG2YLR450W MSH6Q03834 1242 aa9.95□□□□□ -0.82
HMG2YLR450W ARO1P08566 1588 aaKnown RBP9.94□□□□□ -0.82
HMG2YLR450W OSW7P43611 510 aa9.94□□□□□ -0.82
HMG2YLR450W YGL081WP53156 320 aa9.94□□□□□ -0.82
HMG2YLR450W GYL1Q04322 720 aa9.94□□□□□ -0.82
HMG2YLR450W TFB4Q12004 338 aa9.94□□□□□ -0.82
HMG2YLR450W MNR2P35724 969 aa9.93□□□□□ -0.82
HMG2YLR450W IES2P40154 320 aa9.93□□□□□ -0.82
HMG2YLR450W YLF2P38746 405 aa9.93□□□□□ -0.82
HMG2YLR450W THR4P16120 514 aaKnown RBP9.93□□□□□ -0.82
HMG2YLR450W FAR1P21268 830 aa9.93□□□□□ -0.82
HMG2YLR450W YJR142WP47173 342 aa9.93□□□□□ -0.82
HMG2YLR450W KRE28Q04431 385 aa9.93□□□□□ -0.82
HMG2YLR450W PTH2P34222 208 aa9.92□□□□□ -0.82
HMG2YLR450W UBP14P38237 781 aaKnown RBP9.92□□□□□ -0.82
HMG2YLR450W ADE12P80210 433 aaKnown RBP9.92□□□□□ -0.82
HMG2YLR450W UBP13P38187 747 aa9.92□□□□□ -0.82
HMG2YLR450W RME1P32338 300 aaKnown RBP9.91□□□□□ -0.82
HMG2YLR450W SSP1P38871 571 aa9.91□□□□□ -0.82
HMG2YLR450W HAP5Q02516 242 aa9.91□□□□□ -0.82
HMG2YLR450W SLX4Q12098 748 aa9.91□□□□□ -0.82
HMG2YLR450W APC2Q12440 853 aa9.91□□□□□ -0.82
HMG2YLR450W BRR1Q99177 341 aaPredicted RBP9.91□□□□□ -0.82
HMG2YLR450W SEC66P33754 206 aa9.91□□□□□ -0.82
HMG2YLR450W YIR042CP40586 236 aa9.91□□□□□ -0.82
HMG2YLR450W TIM50Q02776 476 aa9.91□□□□□ -0.82
HMG2YLR450W HEL2Q05580 639 aaKnown RBP9.91□□□□□ -0.82
HMG2YLR450W YPR172WQ06608 200 aa9.91□□□□□ -0.82
HMG2YLR450W CDC37P06101 506 aaKnown RBP9.9□□□□□ -0.82
HMG2YLR450W YGL082WP53155 381 aa9.9□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms