RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W DLD1P32891 587 aa8.27□□□□□ -1.09
CTR3YLR411W LSC2P53312 427 aa8.26□□□□□ -1.09
CTR3YLR411W UTP7P40055 554 aaKnown RBP8.25□□□□□ -1.09
CTR3YLR411W SUM1P46676 1062 aa8.25□□□□□ -1.09
CTR3YLR411W YJR098CP47139 656 aa8.25□□□□□ -1.09
CTR3YLR411W CYT1P07143 309 aa8.24□□□□□ -1.09
CTR3YLR411W SSN2P38931 1420 aa8.23□□□□□ -1.09
CTR3YLR411W UBP1P25037 809 aa8.23□□□□□ -1.09
CTR3YLR411W YPQ2Q06328 317 aa8.23□□□□□ -1.09
CTR3YLR411W VAN1P23642 535 aa8.22□□□□□ -1.09
CTR3YLR411W MET22P32179 357 aa8.22□□□□□ -1.09
CTR3YLR411W GEF1P37020 779 aa8.21□□□□□ -1.1
CTR3YLR411W SSN3P39073 555 aa8.21□□□□□ -1.1
CTR3YLR411W YLR346CQ06139 101 aa8.21□□□□□ -1.1
CTR3YLR411W OPT2Q06593 877 aa8.21□□□□□ -1.1
CTR3YLR411W MSN5P52918 1224 aa8.2□□□□□ -1.1
CTR3YLR411W RPL34AP87262 121 aaPredicted RBP8.2□□□□□ -1.1
CTR3YLR411W PUF6Q04373 656 aaKnown RBP8.2□□□□□ -1.1
CTR3YLR411W TCB1Q12466 1186 aa8.2□□□□□ -1.1
CTR3YLR411W VTC4P47075 721 aa8.19□□□□□ -1.1
CTR3YLR411W MCM1P11746 286 aa8.18□□□□□ -1.1
CTR3YLR411W DAL1P32375 460 aa8.18□□□□□ -1.1
CTR3YLR411W CWC15Q03772 175 aaKnown RBP8.18□□□□□ -1.1
CTR3YLR411W LCB5Q06147 687 aaKnown RBP8.18□□□□□ -1.1
CTR3YLR411W TRS33Q99394 268 aa8.18□□□□□ -1.1
CTR3YLR411W NGR1P32831 672 aaKnown RBP8.17□□□□□ -1.1
CTR3YLR411W GLY1P37303 387 aaKnown RBP8.17□□□□□ -1.1
CTR3YLR411W UBP2Q01476 1272 aa8.17□□□□□ -1.1
CTR3YLR411W YDR444WQ04093 687 aa8.17□□□□□ -1.1
CTR3YLR411W SUV3P32580 737 aa8.16□□□□□ -1.1
CTR3YLR411W ALA1P40825 983 aaKnown RBP8.16□□□□□ -1.1
CTR3YLR411W SLA1P32790 1244 aa8.15□□□□□ -1.1
CTR3YLR411W PUN1Q06991 263 aa8.14□□□□□ -1.11
CTR3YLR411W TPS3P38426 1054 aaKnown RBP8.13□□□□□ -1.11
CTR3YLR411W JJJ2P46997 583 aa8.13□□□□□ -1.11
CTR3YLR411W CWH41P53008 833 aa8.13□□□□□ -1.11
CTR3YLR411W SCW11P53189 542 aa8.13□□□□□ -1.11
CTR3YLR411W TY1A-DR3Q12441 440 aa8.13□□□□□ -1.11
CTR3YLR411W SRS2P12954 1174 aa8.12□□□□□ -1.11
CTR3YLR411W SHM1P37292 490 aaPredicted RBP8.12□□□□□ -1.11
CTR3YLR411W AHP1P38013 176 aaKnown RBP8.12□□□□□ -1.11
CTR3YLR411W TY1A-BLQ12266 440 aa8.12□□□□□ -1.11
CTR3YLR411W ALD4P46367 519 aaKnown RBP8.11□□□□□ -1.11
CTR3YLR411W CDC19P00549 500 aaKnown RBP8.1□□□□□ -1.11
CTR3YLR411W HXT5P38695 592 aa8.1□□□□□ -1.11
CTR3YLR411W OSH7P38755 437 aa8.1□□□□□ -1.11
CTR3YLR411W YNL165WP53891 406 aa8.1□□□□□ -1.11
CTR3YLR411W RPS31P05759 152 aaKnown RBP8.09□□□□□ -1.11
CTR3YLR411W IRE1P32361 1115 aa8.09□□□□□ -1.11
CTR3YLR411W CDC3P32457 520 aaKnown RBP8.09□□□□□ -1.11
CTR3YLR411W PNP1Q05788 311 aa8.09□□□□□ -1.11
CTR3YLR411W CAB1Q04430 367 aa8.08□□□□□ -1.12
CTR3YLR411W GAR1P28007 205 aaKnown RBP8.07□□□□□ -1.12
CTR3YLR411W SCD5P34758 872 aa8.07□□□□□ -1.12
CTR3YLR411W YBR197CP38306 217 aa8.07□□□□□ -1.12
CTR3YLR411W Q0182Q9ZZW1 134 aa8.07□□□□□ -1.12
CTR3YLR411W ACO2P39533 789 aa8.06□□□□□ -1.12
CTR3YLR411W UBP15P50101 1230 aa8.06□□□□□ -1.12
CTR3YLR411W TCB3Q03640 1545 aaKnown RBP8.06□□□□□ -1.12
CTR3YLR411W MLF3P32047 452 aa8.05□□□□□ -1.12
CTR3YLR411W FOX2Q02207 900 aaKnown RBP8.05□□□□□ -1.12
CTR3YLR411W UTP4Q06679 776 aaKnown RBP8.05□□□□□ -1.12
CTR3YLR411W PSH1Q12161 406 aa8.05□□□□□ -1.12
CTR3YLR411W PDC6P26263 563 aaKnown RBP8.04□□□□□ -1.12
CTR3YLR411W NAM8Q00539 523 aaKnown RBP8.04□□□□□ -1.12
CTR3YLR411W ISC10P32645 267 aa8.02□□□□□ -1.13
CTR3YLR411W BOL3P39724 118 aa8.02□□□□□ -1.13
CTR3YLR411W YTA6P40328 754 aa8.02□□□□□ -1.13
CTR3YLR411W ROG3P43602 733 aa8.02□□□□□ -1.13
CTR3YLR411W TY1A-MR1Q04215 440 aa8.02□□□□□ -1.13
CTR3YLR411W CAF120P53836 1060 aa8.01□□□□□ -1.13
CTR3YLR411W KAR5Q04746 504 aa8.01□□□□□ -1.13
CTR3YLR411W LEU1P07264 779 aaKnown RBP8□□□□□ -1.13
CTR3YLR411W MRPL33P20084 86 aa8□□□□□ -1.13
CTR3YLR411W RRN6P32786 894 aa8□□□□□ -1.13
CTR3YLR411W RGA1P39083 1007 aa8□□□□□ -1.13
CTR3YLR411W YIR007WP40566 764 aa8□□□□□ -1.13
CTR3YLR411W ALD2P47771 506 aa8□□□□□ -1.13
CTR3YLR411W YDL176WQ12027 708 aa8□□□□□ -1.13
CTR3YLR411W FUR4P05316 633 aaKnown RBP7.99□□□□□ -1.13
CTR3YLR411W LSO1Q3E827 93 aa7.99□□□□□ -1.13
CTR3YLR411W CCP1P00431 361 aa7.98□□□□□ -1.13
CTR3YLR411W BOI1P38041 980 aaKnown RBP7.98□□□□□ -1.13
CTR3YLR411W HAT1Q12341 374 aa7.98□□□□□ -1.13
CTR3YLR411W VMA3P25515 160 aa7.97□□□□□ -1.13
CTR3YLR411W GBP2P25555 427 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
CTR3YLR411W KAP122P32767 1081 aa7.95□□□□□ -1.14
CTR3YLR411W QDR2P40474 542 aa7.95□□□□□ -1.14
CTR3YLR411W MTO1P53070 669 aa7.95□□□□□ -1.14
CTR3YLR411W RGP1P16664 663 aa7.94□□□□□ -1.14
CTR3YLR411W ATG1P53104 897 aa7.94□□□□□ -1.14
CTR3YLR411W CUZ1P53899 274 aa7.94□□□□□ -1.14
CTR3YLR411W APC11Q12157 165 aa7.94□□□□□ -1.14
CTR3YLR411W TRL1P09880 827 aaKnown RBP7.93□□□□□ -1.14
CTR3YLR411W DIT1P21623 536 aa7.93□□□□□ -1.14
CTR3YLR411W MRPL16P38064 232 aa7.93□□□□□ -1.14
CTR3YLR411W SSF1P38789 453 aaPredicted RBP7.93□□□□□ -1.14
CTR3YLR411W YBL113CQ7M4S9 792 aa7.93□□□□□ -1.14
CTR3YLR411W RPC31P17890 251 aa7.92□□□□□ -1.14
CTR3YLR411W ERP5P38819 212 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms