RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W GCD7P32502 381 aaPredicted RBP16.85■□□□□ 0.29
RPN10YHR200W SSA2P10592 639 aaKnown RBP16.84■□□□□ 0.29
RPN10YHR200W RPG1P38249 964 aaKnown RBP16.84■□□□□ 0.29
RPN10YHR200W NMD2P38798 1089 aaKnown RBP16.84■□□□□ 0.29
RPN10YHR200W UBP12P39538 1254 aa16.84■□□□□ 0.29
RPN10YHR200W RAT1Q02792 1006 aaKnown RBP16.84■□□□□ 0.29
RPN10YHR200W SSK22P25390 1331 aaPredicted RBP16.84■□□□□ 0.29
RPN10YHR200W LPD1P09624 499 aaKnown RBP16.83■□□□□ 0.28
RPN10YHR200W SSF1P38789 453 aaPredicted RBP16.83■□□□□ 0.28
RPN10YHR200W CTH1P47976 325 aa16.82■□□□□ 0.28
RPN10YHR200W DIB1Q06819 143 aaPredicted RBP16.82■□□□□ 0.28
RPN10YHR200W MTC5Q03897 1148 aa16.81■□□□□ 0.28
RPN10YHR200W NCB2Q92317 146 aa16.81■□□□□ 0.28
RPN10YHR200W UTP10P42945 1769 aaKnown RBP16.81■□□□□ 0.28
RPN10YHR200W PSH1Q12161 406 aa16.8■□□□□ 0.28
RPN10YHR200W HAT1Q12341 374 aa16.8■□□□□ 0.28
RPN10YHR200W ITC1P53125 1264 aa16.79■□□□□ 0.28
RPN10YHR200W HPC2Q01448 625 aa16.79■□□□□ 0.28
RPN10YHR200W DCD1P06773 312 aa16.78■□□□□ 0.28
RPN10YHR200W RPC31P17890 251 aa16.77■□□□□ 0.28
RPN10YHR200W ILV3P39522 585 aaKnown RBP16.77■□□□□ 0.28
RPN10YHR200W SAC3P46674 1301 aa16.75■□□□□ 0.27
RPN10YHR200W TOS1P38288 455 aa16.73■□□□□ 0.27
RPN10YHR200W RFC1P38630 861 aaKnown RBP16.72■□□□□ 0.27
RPN10YHR200W BDP1P46678 594 aa16.72■□□□□ 0.27
RPN10YHR200W SNU66Q12420 587 aaPredicted RBP16.72■□□□□ 0.27
RPN10YHR200W FCP1Q03254 732 aa16.71■□□□□ 0.27
RPN10YHR200W CTI6Q08923 506 aa16.7■□□□□ 0.26
RPN10YHR200W NKP2Q06162 153 aa16.69■□□□□ 0.26
RPN10YHR200W RAD50P12753 1312 aa16.69■□□□□ 0.26
RPN10YHR200W BDF2Q07442 638 aa16.68■□□□□ 0.26
RPN10YHR200W CDC16P09798 840 aa16.66■□□□□ 0.26
RPN10YHR200W RIX7Q07844 837 aaKnown RBP16.65■□□□□ 0.26
RPN10YHR200W IRC3Q06683 689 aa16.64■□□□□ 0.25
RPN10YHR200W PDR18P53756 1333 aa16.64■□□□□ 0.25
RPN10YHR200W MLC1P53141 149 aa16.63■□□□□ 0.25
RPN10YHR200W SYF1Q04048 859 aaPredicted RBP16.62■□□□□ 0.25
RPN10YHR200W GYP5Q12344 894 aa16.62■□□□□ 0.25
RPN10YHR200W PFF1P38244 976 aa16.6■□□□□ 0.25
RPN10YHR200W ECM21P38167 1117 aaKnown RBP16.59■□□□□ 0.25
RPN10YHR200W NOT3P06102 836 aaKnown RBP16.58■□□□□ 0.24
RPN10YHR200W YGL242CP53066 181 aa16.58■□□□□ 0.24
RPN10YHR200W DPH6Q12429 685 aa16.58■□□□□ 0.24
RPN10YHR200W SSA1P10591 642 aaKnown RBP16.57■□□□□ 0.24
RPN10YHR200W HXT10P43581 546 aa16.57■□□□□ 0.24
RPN10YHR200W BRE1Q07457 700 aaKnown RBP16.57■□□□□ 0.24
RPN10YHR200W ADR1P07248 1323 aa16.55■□□□□ 0.24
RPN10YHR200W SAS4Q04003 481 aa16.55■□□□□ 0.24
RPN10YHR200W VAS1P07806 1104 aaKnown RBP16.54■□□□□ 0.24
RPN10YHR200W SIT4P20604 311 aa16.54■□□□□ 0.24
RPN10YHR200W NUG1P40010 520 aaKnown RBP16.54■□□□□ 0.24
RPN10YHR200W MSN5P52918 1224 aa16.54■□□□□ 0.24
RPN10YHR200W SRC1Q03707 834 aa16.54■□□□□ 0.24
RPN10YHR200W PIF1P07271 859 aa16.53■□□□□ 0.24
RPN10YHR200W YKL222CP35995 705 aa16.53■□□□□ 0.24
RPN10YHR200W RPN1P38764 993 aaKnown RBP16.53■□□□□ 0.24
RPN10YHR200W SEC18P18759 758 aaKnown RBP16.52■□□□□ 0.24
RPN10YHR200W NGR1P32831 672 aaKnown RBP16.52■□□□□ 0.24
RPN10YHR200W UBP16Q02863 499 aa16.52■□□□□ 0.24
RPN10YHR200W RRI2Q12348 645 aa16.52■□□□□ 0.24
RPN10YHR200W POM152P39685 1337 aa16.51■□□□□ 0.23
RPN10YHR200W ERO1Q03103 563 aa16.51■□□□□ 0.23
RPN10YHR200W UBX2Q04228 584 aa16.51■□□□□ 0.23
RPN10YHR200W YIR014WP40570 242 aa16.5■□□□□ 0.23
RPN10YHR200W GCR2Q01722 534 aa16.5■□□□□ 0.23
RPN10YHR200W FRD1P32614 470 aaKnown RBP16.49■□□□□ 0.23
RPN10YHR200W SLA1P32790 1244 aa16.49■□□□□ 0.23
RPN10YHR200W ERT1P38140 529 aa16.49■□□□□ 0.23
RPN10YHR200W OSH3P38713 996 aaKnown RBP16.49■□□□□ 0.23
RPN10YHR200W THI3Q07471 609 aa16.49■□□□□ 0.23
RPN10YHR200W ICP55P40051 511 aa16.48■□□□□ 0.23
RPN10YHR200W ALO1P54783 526 aaKnown RBP16.48■□□□□ 0.23
RPN10YHR200W TPM1P17536 199 aaKnown RBP16.47■□□□□ 0.23
RPN10YHR200W MGM1P32266 881 aa16.47■□□□□ 0.23
RPN10YHR200W CTT1P06115 562 aa16.46■□□□□ 0.23
RPN10YHR200W SMY1P32364 656 aaKnown RBP16.45■□□□□ 0.22
RPN10YHR200W DLD1P32891 587 aa16.45■□□□□ 0.22
RPN10YHR200W BRN1P38170 754 aa16.45■□□□□ 0.22
RPN10YHR200W YNL193WP53870 558 aa16.45■□□□□ 0.22
RPN10YHR200W RMD1Q03441 430 aa16.45■□□□□ 0.22
RPN10YHR200W FPR4Q06205 392 aaPredicted RBP16.45■□□□□ 0.22
RPN10YHR200W GRX6Q12438 231 aa16.45■□□□□ 0.22
RPN10YHR200W PSF3Q12146 194 aa16.44■□□□□ 0.22
RPN10YHR200W KTR1P27810 393 aaKnown RBP16.43■□□□□ 0.22
RPN10YHR200W KTR3P38130 404 aaPredicted RBP16.43■□□□□ 0.22
RPN10YHR200W ENP2P48234 707 aaKnown RBP16.43■□□□□ 0.22
RPN10YHR200W MRPS35P53292 345 aa16.43■□□□□ 0.22
RPN10YHR200W AI2P03876 854 aa16.42■□□□□ 0.22
RPN10YHR200W PBY1P38254 753 aa16.42■□□□□ 0.22
RPN10YHR200W STM1P39015 273 aaKnown RBP16.42■□□□□ 0.22
RPN10YHR200W CWH41P53008 833 aa16.42■□□□□ 0.22
RPN10YHR200W RPN7Q06103 429 aaKnown RBP16.42■□□□□ 0.22
RPN10YHR200W EAF6P47128 113 aa16.41■□□□□ 0.22
RPN10YHR200W RIM20Q12033 661 aa16.41■□□□□ 0.22
RPN10YHR200W KRE2P27809 442 aa16.4■□□□□ 0.22
RPN10YHR200W RPS9BP05755 195 aaKnown RBP16.39■□□□□ 0.21
RPN10YHR200W CAF20P12962 161 aaKnown RBP16.39■□□□□ 0.21
RPN10YHR200W YER156CP40093 338 aaKnown RBP16.38■□□□□ 0.21
RPN10YHR200W EPS1P40557 701 aa16.38■□□□□ 0.21
RPN10YHR200W RPT4P53549 437 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms