RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSC2	YGR244C	UBP12	P39538	1254 aa		12.03	□□□□□ -0.48
LSC2	YGR244C	UTP22	P53254	1237 aa	Predicted RBP	12.03	□□□□□ -0.48
LSC2	YGR244C	HPC2	Q01448	625 aa		12.03	□□□□□ -0.48
LSC2	YGR244C	AVT3	P36062	692 aa		12.02	□□□□□ -0.49
LSC2	YGR244C	RPG1	P38249	964 aa	Known RBP	12.02	□□□□□ -0.49
LSC2	YGR244C	ILV3	P39522	585 aa	Known RBP	12.02	□□□□□ -0.49
LSC2	YGR244C	PSH1	Q12161	406 aa		12.02	□□□□□ -0.49
LSC2	YGR244C	NCB2	Q92317	146 aa		12.02	□□□□□ -0.49
LSC2	YGR244C	YBL086C	P38177	466 aa		12.01	□□□□□ -0.49
LSC2	YGR244C	BDP1	P46678	594 aa		12.01	□□□□□ -0.49
LSC2	YGR244C	CTI6	Q08923	506 aa		12.01	□□□□□ -0.49
LSC2	YGR244C	SSA2	P10592	639 aa	Known RBP	12	□□□□□ -0.49
LSC2	YGR244C	RFC1	P38630	861 aa	Known RBP	12	□□□□□ -0.49
LSC2	YGR244C	GTT3	P39996	337 aa		12	□□□□□ -0.49
LSC2	YGR244C	ITC1	P53125	1264 aa		12	□□□□□ -0.49
LSC2	YGR244C	DCD1	P06773	312 aa		11.99	□□□□□ -0.49
LSC2	YGR244C	GCD7	P32502	381 aa	Predicted RBP	11.99	□□□□□ -0.49
LSC2	YGR244C	SSF1	P38789	453 aa	Predicted RBP	11.99	□□□□□ -0.49
LSC2	YGR244C	RAT1	Q02792	1006 aa	Known RBP	11.99	□□□□□ -0.49
LSC2	YGR244C	SET1	P38827	1080 aa	Known RBP	11.98	□□□□□ -0.49
LSC2	YGR244C	FCP1	Q03254	732 aa		11.98	□□□□□ -0.49
LSC2	YGR244C	HAT1	Q12341	374 aa		11.98	□□□□□ -0.49
LSC2	YGR244C	SNU66	Q12420	587 aa	Predicted RBP	11.98	□□□□□ -0.49
LSC2	YGR244C	CTH1	P47976	325 aa		11.96	□□□□□ -0.49
LSC2	YGR244C	NKP2	Q06162	153 aa		11.96	□□□□□ -0.49
LSC2	YGR244C	DIB1	Q06819	143 aa	Predicted RBP	11.95	□□□□□ -0.5
LSC2	YGR244C	MTC5	Q03897	1148 aa		11.94	□□□□□ -0.5
LSC2	YGR244C	SSK22	P25390	1331 aa	Predicted RBP	11.92	□□□□□ -0.5
LSC2	YGR244C	IRC3	Q06683	689 aa		11.91	□□□□□ -0.5
LSC2	YGR244C	RIX7	Q07844	837 aa	Known RBP	11.91	□□□□□ -0.5
LSC2	YGR244C	UTP10	P42945	1769 aa	Known RBP	11.91	□□□□□ -0.5
LSC2	YGR244C	RAD50	P12753	1312 aa		11.9	□□□□□ -0.5
LSC2	YGR244C	PDR18	P53756	1333 aa		11.9	□□□□□ -0.5
LSC2	YGR244C	TOS1	P38288	455 aa		11.9	□□□□□ -0.5
LSC2	YGR244C	BDF2	Q07442	638 aa		11.9	□□□□□ -0.5
LSC2	YGR244C	HXT10	P43581	546 aa		11.89	□□□□□ -0.51
LSC2	YGR244C	MLC1	P53141	149 aa		11.88	□□□□□ -0.51
LSC2	YGR244C	SLA1	P32790	1244 aa		11.87	□□□□□ -0.51
LSC2	YGR244C	SAC3	P46674	1301 aa		11.86	□□□□□ -0.51
LSC2	YGR244C	VAS1	P07806	1104 aa	Known RBP	11.86	□□□□□ -0.51
LSC2	YGR244C	CDC16	P09798	840 aa		11.86	□□□□□ -0.51
LSC2	YGR244C	RMD1	Q03441	430 aa		11.86	□□□□□ -0.51
LSC2	YGR244C	GYP5	Q12344	894 aa		11.86	□□□□□ -0.51
LSC2	YGR244C	NOT3	P06102	836 aa	Known RBP	11.85	□□□□□ -0.51
LSC2	YGR244C	ECM21	P38167	1117 aa	Known RBP	11.85	□□□□□ -0.51
LSC2	YGR244C	YGL242C	P53066	181 aa		11.85	□□□□□ -0.51
LSC2	YGR244C	SYF1	Q04048	859 aa	Predicted RBP	11.85	□□□□□ -0.51
LSC2	YGR244C	RRI2	Q12348	645 aa		11.85	□□□□□ -0.51
LSC2	YGR244C	NGR1	P32831	672 aa	Known RBP	11.84	□□□□□ -0.51
LSC2	YGR244C	RPN1	P38764	993 aa	Known RBP	11.84	□□□□□ -0.51
LSC2	YGR244C	SRC1	Q03707	834 aa		11.84	□□□□□ -0.51
LSC2	YGR244C	SAS4	Q04003	481 aa		11.84	□□□□□ -0.51
LSC2	YGR244C	MSN5	P52918	1224 aa		11.83	□□□□□ -0.52
LSC2	YGR244C	BRE1	Q07457	700 aa	Known RBP	11.83	□□□□□ -0.52
LSC2	YGR244C	DPH6	Q12429	685 aa		11.83	□□□□□ -0.52
LSC2	YGR244C	SEC18	P18759	758 aa	Known RBP	11.82	□□□□□ -0.52
LSC2	YGR244C	FRD1	P32614	470 aa	Known RBP	11.82	□□□□□ -0.52
LSC2	YGR244C	PFF1	P38244	976 aa		11.81	□□□□□ -0.52
LSC2	YGR244C	UBP16	Q02863	499 aa		11.81	□□□□□ -0.52
LSC2	YGR244C	FPR4	Q06205	392 aa	Predicted RBP	11.81	□□□□□ -0.52
LSC2	YGR244C	CAF20	P12962	161 aa	Known RBP	11.8	□□□□□ -0.52
LSC2	YGR244C	THI3	Q07471	609 aa		11.8	□□□□□ -0.52
LSC2	YGR244C	BRN1	P38170	754 aa		11.79	□□□□□ -0.52
LSC2	YGR244C	ALO1	P54783	526 aa	Known RBP	11.79	□□□□□ -0.52
LSC2	YGR244C	GCR2	Q01722	534 aa		11.79	□□□□□ -0.52
LSC2	YGR244C	SIT4	P20604	311 aa		11.78	□□□□□ -0.52
LSC2	YGR244C	MGM1	P32266	881 aa		11.78	□□□□□ -0.52
LSC2	YGR244C	DLD1	P32891	587 aa		11.78	□□□□□ -0.52
LSC2	YGR244C	PBY1	P38254	753 aa		11.78	□□□□□ -0.52
LSC2	YGR244C	YNL193W	P53870	558 aa		11.78	□□□□□ -0.52
LSC2	YGR244C	AI2	P03876	854 aa		11.77	□□□□□ -0.53
LSC2	YGR244C	YKL222C	P35995	705 aa		11.77	□□□□□ -0.53
LSC2	YGR244C	STM1	P39015	273 aa	Known RBP	11.77	□□□□□ -0.53
LSC2	YGR244C	NUG1	P40010	520 aa	Known RBP	11.77	□□□□□ -0.53
LSC2	YGR244C	ICP55	P40051	511 aa		11.77	□□□□□ -0.53
LSC2	YGR244C	ADR1	P07248	1323 aa		11.77	□□□□□ -0.53
LSC2	YGR244C	PIF1	P07271	859 aa		11.76	□□□□□ -0.53
LSC2	YGR244C	CWH41	P53008	833 aa		11.76	□□□□□ -0.53
LSC2	YGR244C	RPN7	Q06103	429 aa	Known RBP	11.76	□□□□□ -0.53
LSC2	YGR244C	KTR1	P27810	393 aa	Known RBP	11.75	□□□□□ -0.53
LSC2	YGR244C	SMY1	P32364	656 aa	Known RBP	11.75	□□□□□ -0.53
LSC2	YGR244C	KTR3	P38130	404 aa	Predicted RBP	11.75	□□□□□ -0.53
LSC2	YGR244C	MRPS35	P53292	345 aa		11.75	□□□□□ -0.53
LSC2	YGR244C	ERO1	Q03103	563 aa		11.75	□□□□□ -0.53
LSC2	YGR244C	RIM20	Q12033	661 aa		11.75	□□□□□ -0.53
LSC2	YGR244C	POM152	P39685	1337 aa		11.75	□□□□□ -0.53
LSC2	YGR244C	YIR014W	P40570	242 aa		11.74	□□□□□ -0.53
LSC2	YGR244C	ENP2	P48234	707 aa	Known RBP	11.74	□□□□□ -0.53
LSC2	YGR244C	CTT1	P06115	562 aa		11.73	□□□□□ -0.53
LSC2	YGR244C	TPM1	P17536	199 aa	Known RBP	11.73	□□□□□ -0.53
LSC2	YGR244C	KRI1	P42846	591 aa	Known RBP	11.73	□□□□□ -0.53
LSC2	YGR244C	EAF6	P47128	113 aa		11.73	□□□□□ -0.53
LSC2	YGR244C	RPT4	P53549	437 aa	Known RBP	11.73	□□□□□ -0.53
LSC2	YGR244C	ERT1	P38140	529 aa		11.72	□□□□□ -0.53
LSC2	YGR244C	OSH3	P38713	996 aa	Known RBP	11.72	□□□□□ -0.53
LSC2	YGR244C	UBX2	Q04228	584 aa		11.72	□□□□□ -0.53
LSC2	YGR244C	GRX6	Q12438	231 aa		11.72	□□□□□ -0.53
LSC2	YGR244C	HXT13	P39924	564 aa		11.71	□□□□□ -0.53
LSC2	YGR244C	KRE2	P27809	442 aa		11.7	□□□□□ -0.54
LSC2	YGR244C	TIF4632	P39936	914 aa	Known RBP	11.7	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms