RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C VTH1P40438 1549 aa3.97□□□□□ -1.77
SPT4YGR063C VTH2P40890 1549 aa3.97□□□□□ -1.77
SPT4YGR063C DPH5P32469 300 aaPredicted RBP3.97□□□□□ -1.77
SPT4YGR063C EFB1P32471 206 aaKnown RBP3.97□□□□□ -1.77
SPT4YGR063C TOA1P32773 286 aa3.97□□□□□ -1.77
SPT4YGR063C OLA1P38219 394 aaKnown RBP3.97□□□□□ -1.77
SPT4YGR063C MPH1P40562 993 aa3.97□□□□□ -1.77
SPT4YGR063C UBX2Q04228 584 aa3.97□□□□□ -1.77
SPT4YGR063C GIN4Q12263 1142 aa3.97□□□□□ -1.77
SPT4YGR063C YKL068W-AQ3E826 78 aa3.97□□□□□ -1.77
SPT4YGR063C BNR1P40450 1375 aa3.97□□□□□ -1.77
SPT4YGR063C TY2B-BQ12491 1770 aa3.97□□□□□ -1.77
SPT4YGR063C SUP35P05453 685 aaKnown RBP3.96□□□□□ -1.78
SPT4YGR063C MST1P07236 462 aa3.96□□□□□ -1.78
SPT4YGR063C SWI6P09959 803 aa3.96□□□□□ -1.78
SPT4YGR063C THR4P16120 514 aaKnown RBP3.96□□□□□ -1.78
SPT4YGR063C PDI1P17967 522 aaKnown RBP3.96□□□□□ -1.78
SPT4YGR063C STE11P23561 717 aa3.96□□□□□ -1.78
SPT4YGR063C EXO84P38261 753 aa3.96□□□□□ -1.78
SPT4YGR063C AIM20P40451 204 aa3.96□□□□□ -1.78
SPT4YGR063C TFG1P41895 735 aaPredicted RBP3.96□□□□□ -1.78
SPT4YGR063C DNM1P54861 757 aa3.96□□□□□ -1.78
SPT4YGR063C ARR1Q06596 294 aa3.96□□□□□ -1.78
SPT4YGR063C ABP140Q08641 628 aaKnown RBP3.96□□□□□ -1.78
SPT4YGR063C YPL225WQ08971 146 aaKnown RBP3.96□□□□□ -1.78
SPT4YGR063C PSK1P31374 1356 aa3.96□□□□□ -1.78
SPT4YGR063C DRS2P39524 1355 aa3.96□□□□□ -1.78
SPT4YGR063C IML1P47170 1584 aa3.96□□□□□ -1.78
SPT4YGR063C LTE1P07866 1435 aa3.95□□□□□ -1.78
SPT4YGR063C KRE5P22023 1365 aa3.95□□□□□ -1.78
SPT4YGR063C KEX2P13134 814 aa3.95□□□□□ -1.78
SPT4YGR063C ISW1P38144 1129 aa3.95□□□□□ -1.78
SPT4YGR063C PET100P38958 111 aa3.95□□□□□ -1.78
SPT4YGR063C YAP5P40574 245 aa3.95□□□□□ -1.78
SPT4YGR063C LEM3P42838 414 aa3.95□□□□□ -1.78
SPT4YGR063C NPA3P47122 385 aa3.95□□□□□ -1.78
SPT4YGR063C HRQ1Q05549 1077 aa3.95□□□□□ -1.78
SPT4YGR063C COG4Q06096 861 aa3.95□□□□□ -1.78
SPT4YGR063C TLG2Q08144 397 aa3.95□□□□□ -1.78
SPT4YGR063C SLP1Q12232 587 aa3.95□□□□□ -1.78
SPT4YGR063C GLE1Q12315 538 aa3.95□□□□□ -1.78
SPT4YGR063C RRP5Q05022 1729 aaKnown RBP3.95□□□□□ -1.78
SPT4YGR063C RTC1Q08281 1341 aa3.95□□□□□ -1.78
SPT4YGR063C DOP1Q03921 1698 aa3.94□□□□□ -1.78
SPT4YGR063C TY1B-AO13527 1196 aaKnown RBP3.94□□□□□ -1.78
SPT4YGR063C SSA1P10591 642 aaKnown RBP3.94□□□□□ -1.78
SPT4YGR063C SSA2P10592 639 aaKnown RBP3.94□□□□□ -1.78
SPT4YGR063C CDC3P32457 520 aaKnown RBP3.94□□□□□ -1.78
SPT4YGR063C RRP1P35178 278 aaPredicted RBP3.94□□□□□ -1.78
SPT4YGR063C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SPT4YGR063C GDT1P38301 280 aaPredicted RBP3.94□□□□□ -1.78
SPT4YGR063C PRP31P49704 494 aaPredicted RBP3.94□□□□□ -1.78
SPT4YGR063C CWH41P53008 833 aa3.94□□□□□ -1.78
SPT4YGR063C JJJ1P53863 590 aa3.94□□□□□ -1.78
SPT4YGR063C ORC1P54784 914 aaPredicted RBP3.94□□□□□ -1.78
SPT4YGR063C TIM50Q02776 476 aa3.94□□□□□ -1.78
SPT4YGR063C SPO19Q03029 223 aa3.94□□□□□ -1.78
SPT4YGR063C YOR238WQ08634 303 aa3.94□□□□□ -1.78
SPT4YGR063C ATG9Q12142 997 aa3.94□□□□□ -1.78
SPT4YGR063C RNR2P09938 399 aaKnown RBP3.93□□□□□ -1.78
SPT4YGR063C BUD31P25337 157 aaPredicted RBP3.93□□□□□ -1.78
SPT4YGR063C CDC10P25342 322 aaKnown RBP3.93□□□□□ -1.78
SPT4YGR063C BRF1P29056 596 aa3.93□□□□□ -1.78
SPT4YGR063C ELM1P32801 640 aa3.93□□□□□ -1.78
SPT4YGR063C YME2P32843 850 aa3.93□□□□□ -1.78
SPT4YGR063C DLD1P32891 587 aa3.93□□□□□ -1.78
SPT4YGR063C TPS3P38426 1054 aaKnown RBP3.93□□□□□ -1.78
SPT4YGR063C TOM71P38825 639 aaKnown RBP3.93□□□□□ -1.78
SPT4YGR063C CTK3P46963 296 aaPredicted RBP3.93□□□□□ -1.78
SPT4YGR063C CCM1P48237 864 aaPredicted RBP3.93□□□□□ -1.78
SPT4YGR063C HUL5P53119 910 aa3.93□□□□□ -1.78
SPT4YGR063C ARP5P53946 755 aa3.93□□□□□ -1.78
SPT4YGR063C NKP1Q12493 238 aa3.93□□□□□ -1.78
SPT4YGR063C DNF3Q12674 1656 aa3.93□□□□□ -1.78
SPT4YGR063C SAC3P46674 1301 aa3.93□□□□□ -1.78
SPT4YGR063C BIK1P11709 440 aa3.92□□□□□ -1.78
SPT4YGR063C MCM1P11746 286 aa3.92□□□□□ -1.78
SPT4YGR063C PHO87P25360 923 aa3.92□□□□□ -1.78
SPT4YGR063C RPL5P26321 297 aaKnown RBP3.92□□□□□ -1.78
SPT4YGR063C RTG3P38165 486 aa3.92□□□□□ -1.78
SPT4YGR063C NPR3P38742 1146 aa3.92□□□□□ -1.78
SPT4YGR063C VPS8P39702 1274 aa3.92□□□□□ -1.78
SPT4YGR063C SIT1P39980 628 aa3.92□□□□□ -1.78
SPT4YGR063C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SPT4YGR063C INP52P50942 1183 aa3.92□□□□□ -1.78
SPT4YGR063C SHE4P51534 789 aa3.92□□□□□ -1.78
SPT4YGR063C YGL082WP53155 381 aa3.92□□□□□ -1.78
SPT4YGR063C IST1P53843 298 aaPredicted RBP3.92□□□□□ -1.78
SPT4YGR063C GCR2Q01722 534 aa3.92□□□□□ -1.78
SPT4YGR063C ARO80Q04052 950 aa3.92□□□□□ -1.78
SPT4YGR063C GYL1Q04322 720 aa3.92□□□□□ -1.78
SPT4YGR063C YMR196WQ04336 1088 aa3.92□□□□□ -1.78
SPT4YGR063C OMS1Q06668 471 aa3.92□□□□□ -1.78
SPT4YGR063C NOC3Q07896 663 aaPredicted RBP3.92□□□□□ -1.78
SPT4YGR063C CFT2Q12102 859 aaPredicted RBP3.92□□□□□ -1.78
SPT4YGR063C SMC6Q12749 1114 aa3.92□□□□□ -1.78
SPT4YGR063C CDC37P06101 506 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C DAL5P15365 543 aa3.91□□□□□ -1.78
SPT4YGR063C MFT1P33441 392 aaKnown RBP3.91□□□□□ -1.78
SPT4YGR063C NUF2P33895 451 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms