RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A ERO1Q03103 563 aa11.55□□□□□ -0.56
LSB3YFR024C-A YDR306CQ06640 478 aa11.55□□□□□ -0.56
LSB3YFR024C-A SWI1P09547 1314 aa11.55□□□□□ -0.56
LSB3YFR024C-A PKH1Q03407 766 aa11.54□□□□□ -0.56
LSB3YFR024C-A PMD1P32634 1753 aa11.54□□□□□ -0.56
LSB3YFR024C-A MRP7P12687 371 aa11.54□□□□□ -0.56
LSB3YFR024C-A YJR008WP47085 338 aa11.54□□□□□ -0.56
LSB3YFR024C-A MAK21Q12176 1025 aaKnown RBP11.53□□□□□ -0.56
LSB3YFR024C-A SIT4P20604 311 aa11.52□□□□□ -0.57
LSB3YFR024C-A NUP133P36161 1157 aa11.52□□□□□ -0.57
LSB3YFR024C-A YRB30P53107 440 aaPredicted RBP11.52□□□□□ -0.57
LSB3YFR024C-A NSR1P27476 414 aaKnown RBP RIP-Chip data11.5□□□□□ -0.57 RIP-Chip
LSB3YFR024C-A UBP16Q02863 499 aa11.5□□□□□ -0.57
LSB3YFR024C-A SYF1Q04048 859 aaPredicted RBP11.5□□□□□ -0.57
LSB3YFR024C-A RPS9BP05755 195 aaKnown RBP11.49□□□□□ -0.57
LSB3YFR024C-A RVB2Q12464 471 aaKnown RBP11.49□□□□□ -0.57
LSB3YFR024C-A SET1P38827 1080 aaKnown RBP11.48□□□□□ -0.57
LSB3YFR024C-A SQS1P53866 767 aaKnown RBP11.48□□□□□ -0.57
LSB3YFR024C-A GRX6Q12438 231 aa11.48□□□□□ -0.57
LSB3YFR024C-A YPP1P46951 817 aa11.47□□□□□ -0.57
LSB3YFR024C-A SAS4Q04003 481 aa11.47□□□□□ -0.57
LSB3YFR024C-A NOP8Q08287 484 aaPredicted RBP11.47□□□□□ -0.57
LSB3YFR024C-A HAA1Q12753 694 aaKnown RBP11.47□□□□□ -0.57
LSB3YFR024C-A CAF20P12962 161 aaKnown RBP11.46□□□□□ -0.57
LSB3YFR024C-A RPN1P38764 993 aaKnown RBP11.46□□□□□ -0.57
LSB3YFR024C-A FCP1Q03254 732 aa11.46□□□□□ -0.57
LSB3YFR024C-A FRD1P32614 470 aaKnown RBP11.45□□□□□ -0.58
LSB3YFR024C-A FPK1P53739 893 aa11.45□□□□□ -0.58
LSB3YFR024C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
LSB3YFR024C-A SAC3P46674 1301 aa11.45□□□□□ -0.58
LSB3YFR024C-A ICL1P28240 557 aaPredicted RBP11.44□□□□□ -0.58
LSB3YFR024C-A YGR122WP53272 402 aa11.44□□□□□ -0.58
LSB3YFR024C-A TOP1P04786 769 aa11.43□□□□□ -0.58
LSB3YFR024C-A RAD24P32641 659 aa11.43□□□□□ -0.58
LSB3YFR024C-A YKU70P32807 602 aa11.43□□□□□ -0.58
LSB3YFR024C-A ITC1P53125 1264 aa11.43□□□□□ -0.58
LSB3YFR024C-A PRS1P32895 427 aaKnown RBP11.42□□□□□ -0.58
LSB3YFR024C-A SHC1P39000 512 aa11.42□□□□□ -0.58
LSB3YFR024C-A PSH1Q12161 406 aa11.42□□□□□ -0.58
LSB3YFR024C-A MTC5Q03897 1148 aa11.41□□□□□ -0.58
LSB3YFR024C-A HKR1P41809 1802 aa11.41□□□□□ -0.58
LSB3YFR024C-A CSI1Q04368 295 aa11.41□□□□□ -0.58
LSB3YFR024C-A DPH6Q12429 685 aa11.41□□□□□ -0.58
LSB3YFR024C-A SUP35P05453 685 aaKnown RBP11.4□□□□□ -0.59
LSB3YFR024C-A SWC3P31376 625 aa11.4□□□□□ -0.59
LSB3YFR024C-A BOI2P39969 1040 aa11.4□□□□□ -0.59
LSB3YFR024C-A YIL092WP40497 633 aa11.4□□□□□ -0.59
LSB3YFR024C-A RPS19AP07280 144 aaKnown RBP11.39□□□□□ -0.59
LSB3YFR024C-A RPS19BP07281 144 aaPredicted RBP11.39□□□□□ -0.59
LSB3YFR024C-A UBP12P39538 1254 aa11.39□□□□□ -0.59
LSB3YFR024C-A ATG20Q07528 640 aa11.39□□□□□ -0.59
LSB3YFR024C-A DAL5P15365 543 aa11.38□□□□□ -0.59
LSB3YFR024C-A UBX2Q04228 584 aa11.38□□□□□ -0.59
LSB3YFR024C-A RAD2P07276 1031 aa11.37□□□□□ -0.59
LSB3YFR024C-A RET1P22276 1149 aaKnown RBP11.36□□□□□ -0.59
LSB3YFR024C-A TFA1P36100 482 aa11.36□□□□□ -0.59
LSB3YFR024C-A SLI15P38283 698 aa11.36□□□□□ -0.59
LSB3YFR024C-A ICP55P40051 511 aa11.36□□□□□ -0.59
LSB3YFR024C-A KRE2P27809 442 aa11.34□□□□□ -0.59
LSB3YFR024C-A TIF4632P39936 914 aaKnown RBP11.34□□□□□ -0.59
LSB3YFR024C-A DPL1Q05567 589 aa11.34□□□□□ -0.59
LSB3YFR024C-A NGR1P32831 672 aaKnown RBP11.33□□□□□ -0.6
LSB3YFR024C-A SNU66Q12420 587 aaPredicted RBP11.33□□□□□ -0.6
LSB3YFR024C-A FAS2P19097 1887 aaKnown RBP11.32□□□□□ -0.6
LSB3YFR024C-A TRP5P00931 707 aaKnown RBP11.32□□□□□ -0.6
LSB3YFR024C-A MGM1P32266 881 aa11.32□□□□□ -0.6
LSB3YFR024C-A THI3Q07471 609 aa11.32□□□□□ -0.6
LSB3YFR024C-A FIG2P25653 1609 aa11.32□□□□□ -0.6
LSB3YFR024C-A SPT21P35209 758 aa11.31□□□□□ -0.6
LSB3YFR024C-A PEX21P50091 288 aa11.31□□□□□ -0.6
LSB3YFR024C-A RPT4P53549 437 aaKnown RBP11.31□□□□□ -0.6
LSB3YFR024C-A THS1P04801 734 aaKnown RBP11.3□□□□□ -0.6
LSB3YFR024C-A MSM1P22438 575 aa11.3□□□□□ -0.6
LSB3YFR024C-A YNG2P38806 282 aaKnown RBP11.3□□□□□ -0.6
LSB3YFR024C-A SET4P42948 560 aa11.3□□□□□ -0.6
LSB3YFR024C-A HGH1P48362 394 aaKnown RBP11.3□□□□□ -0.6
LSB3YFR024C-A SRC1Q03707 834 aa11.3□□□□□ -0.6
LSB3YFR024C-A YLR278CQ05854 1341 aa11.3□□□□□ -0.6
LSB3YFR024C-A MRPL32P25348 183 aa11.29□□□□□ -0.6
LSB3YFR024C-A RTG2P32608 588 aaKnown RBP11.29□□□□□ -0.6
LSB3YFR024C-A SPL2P38839 148 aa11.29□□□□□ -0.6
LSB3YFR024C-A HXT10P43581 546 aa11.29□□□□□ -0.6
LSB3YFR024C-A PUS5Q06244 254 aa11.29□□□□□ -0.6
LSB3YFR024C-A ADR1P07248 1323 aa11.29□□□□□ -0.6
LSB3YFR024C-A DUR1,2P32528 1835 aaKnown RBP11.29□□□□□ -0.6
LSB3YFR024C-A SSA4P22202 642 aaKnown RBP11.28□□□□□ -0.6
LSB3YFR024C-A SSF1P38789 453 aaPredicted RBP11.28□□□□□ -0.6
LSB3YFR024C-A SPO1P53541 631 aa11.28□□□□□ -0.6
LSB3YFR024C-A RRG1Q12167 365 aaPredicted RBP11.28□□□□□ -0.6
LSB3YFR024C-A GCD7P32502 381 aaPredicted RBP11.27□□□□□ -0.61
LSB3YFR024C-A NUG1P40010 520 aaKnown RBP11.27□□□□□ -0.61
LSB3YFR024C-A TIM50Q02776 476 aa11.27□□□□□ -0.61
LSB3YFR024C-A POM152P39685 1337 aa11.26□□□□□ -0.61
LSB3YFR024C-A GLC3P32775 704 aa11.26□□□□□ -0.61
LSB3YFR024C-A FET4P40988 552 aa11.25□□□□□ -0.61
LSB3YFR024C-A CRF1Q04930 467 aa11.25□□□□□ -0.61
LSB3YFR024C-A GAS5Q08193 484 aa11.25□□□□□ -0.61
LSB3YFR024C-A PSF3Q12146 194 aa11.25□□□□□ -0.61
LSB3YFR024C-A AFG2P32794 780 aa11.24□□□□□ -0.61
LSB3YFR024C-A FUN12P39730 1002 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 90.7 ms