RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W TSR4P25040 408 aa1.75□□□□□ -2.13
SPC110YDR356W CDC3P32457 520 aaKnown RBP1.75□□□□□ -2.13
SPC110YDR356W SWE1P32944 819 aa1.75□□□□□ -2.13
SPC110YDR356W RSC8P43609 557 aaKnown RBP1.75□□□□□ -2.13
SPC110YDR356W ZDS1P50111 915 aaKnown RBP1.75□□□□□ -2.13
SPC110YDR356W PRP3Q03338 469 aaPredicted RBP1.75□□□□□ -2.13
SPC110YDR356W YPR097WQ06839 1073 aa1.75□□□□□ -2.13
SPC110YDR356W APC11Q12157 165 aa1.75□□□□□ -2.13
SPC110YDR356W YGR161W-CQ3E744 92 aa1.75□□□□□ -2.13
SPC110YDR356W SSK22P25390 1331 aaPredicted RBP1.75□□□□□ -2.13
SPC110YDR356W YCF1P39109 1515 aaKnown RBP1.74□□□□□ -2.13
SPC110YDR356W SWI6P09959 803 aa1.74□□□□□ -2.13
SPC110YDR356W PDR1P12383 1068 aa1.74□□□□□ -2.13
SPC110YDR356W RPB4P20433 221 aaPredicted RBP1.74□□□□□ -2.13
SPC110YDR356W PHO84P25297 587 aaKnown RBP1.74□□□□□ -2.13
SPC110YDR356W TIM54P47045 478 aa1.74□□□□□ -2.13
SPC110YDR356W VID30P53076 958 aa1.74□□□□□ -2.13
SPC110YDR356W NOP15P53927 220 aaPredicted RBP1.74□□□□□ -2.13
SPC110YDR356W YNL011CP53980 444 aa1.74□□□□□ -2.13
SPC110YDR356W PCL8Q08966 492 aa1.74□□□□□ -2.13
SPC110YDR356W STF1P01098 86 aa1.74□□□□□ -2.13
SPC110YDR356W RAD2P07276 1031 aa1.74□□□□□ -2.13
SPC110YDR356W SRP54P20424 541 aaKnown RBP1.74□□□□□ -2.13
SPC110YDR356W SRP40P32583 406 aaPredicted RBP1.74□□□□□ -2.13
SPC110YDR356W SCT1P32784 759 aa1.74□□□□□ -2.13
SPC110YDR356W UTP22P53254 1237 aaPredicted RBP1.74□□□□□ -2.13
SPC110YDR356W ATF2P53296 535 aa1.74□□□□□ -2.13
SPC110YDR356W ISA1Q07821 250 aaPredicted RBP1.74□□□□□ -2.13
SPC110YDR356W MPC54Q08550 464 aa1.74□□□□□ -2.13
SPC110YDR356W HMI1Q12039 706 aa1.74□□□□□ -2.13
SPC110YDR356W TSC11P40061 1430 aa1.74□□□□□ -2.13
SPC110YDR356W GFD2P25370 566 aaKnown RBP1.73□□□□□ -2.13
SPC110YDR356W POL4P25615 582 aa1.73□□□□□ -2.13
SPC110YDR356W VHR2P40041 505 aa1.73□□□□□ -2.13
SPC110YDR356W NUP84P52891 726 aa1.73□□□□□ -2.13
SPC110YDR356W ERP4Q12450 207 aa1.73□□□□□ -2.13
SPC110YDR356W SWI1P09547 1314 aa1.73□□□□□ -2.13
SPC110YDR356W SES1P07284 462 aaKnown RBP1.73□□□□□ -2.13
SPC110YDR356W TPD3P31383 635 aa1.73□□□□□ -2.13
SPC110YDR356W SLA1P32790 1244 aa1.73□□□□□ -2.13
SPC110YDR356W STE5P32917 917 aa1.73□□□□□ -2.13
SPC110YDR356W TPM2P40414 161 aa1.73□□□□□ -2.13
SPC110YDR356W YPP1P46951 817 aa1.73□□□□□ -2.13
SPC110YDR356W ERO1Q03103 563 aa1.73□□□□□ -2.13
SPC110YDR356W YPR172WQ06608 200 aa1.73□□□□□ -2.13
SPC110YDR356W YDL121CQ07541 149 aa1.73□□□□□ -2.13
SPC110YDR356W NYV1Q12255 253 aa1.73□□□□□ -2.13
SPC110YDR356W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SPC110YDR356W RTP1Q12751 981 aa1.73□□□□□ -2.13
SPC110YDR356W AI4P03878 556 aa1.72□□□□□ -2.13
SPC110YDR356W SSB1P11484 613 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W MSS116P15424 664 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W MER1P16523 270 aa1.72□□□□□ -2.13
SPC110YDR356W CLN1P20437 546 aa1.72□□□□□ -2.13
SPC110YDR356W MUM2P38236 366 aa1.72□□□□□ -2.13
SPC110YDR356W KIC1P38692 1080 aa1.72□□□□□ -2.13
SPC110YDR356W LAM1P38851 1228 aa1.72□□□□□ -2.13
SPC110YDR356W SPT8P38915 602 aa1.72□□□□□ -2.13
SPC110YDR356W SSB2P40150 613 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W RNH1Q04740 348 aa1.72□□□□□ -2.13
SPC110YDR356W NOB1Q08444 459 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W SLK19Q08581 821 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W APC5Q08683 685 aa1.72□□□□□ -2.13
SPC110YDR356W YML133CQ03099 1374 aa1.72□□□□□ -2.13
SPC110YDR356W YLL067CQ07888 1374 aa1.72□□□□□ -2.13
SPC110YDR356W YLL066CQ99208 1374 aa1.72□□□□□ -2.13
SPC110YDR356W PRT1P06103 763 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W MPH3P0CE00 602 aa1.72□□□□□ -2.13
SPC110YDR356W UBP1P25037 809 aa1.72□□□□□ -2.13
SPC110YDR356W SSO1P32867 290 aa1.72□□□□□ -2.13
SPC110YDR356W YKL091CP33324 310 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W SPC42P36094 363 aa1.72□□□□□ -2.13
SPC110YDR356W UIP5P36137 443 aa1.72□□□□□ -2.13
SPC110YDR356W CCL1P37366 393 aa1.72□□□□□ -2.13
SPC110YDR356W YRB1P41920 201 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W MTR4P47047 1073 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W HOS2P53096 452 aaPredicted RBP1.72□□□□□ -2.13
SPC110YDR356W LSC1P53598 329 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W BNI5P53890 448 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W FAR11P53917 953 aa1.72□□□□□ -2.13
SPC110YDR356W MDM1Q01846 1127 aa1.72□□□□□ -2.13
SPC110YDR356W SRP1Q02821 542 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W TSR2Q06672 205 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W UBX5Q06682 500 aa1.72□□□□□ -2.13
SPC110YDR356W IMH1Q06704 911 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W NOP8Q08287 484 aaPredicted RBP1.72□□□□□ -2.13
SPC110YDR356W LSP1Q12230 341 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W SSK2P53599 1579 aa1.72□□□□□ -2.13
SPC110YDR356W BRF1P29056 596 aa1.72□□□□□ -2.13
SPC110YDR356W MAC1P35192 417 aa1.72□□□□□ -2.13
SPC110YDR356W MPE1P35728 441 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W MAD1P40957 749 aa1.72□□□□□ -2.13
SPC110YDR356W MSH4P40965 878 aaPredicted RBP1.72□□□□□ -2.13
SPC110YDR356W THI12P42883 340 aa1.72□□□□□ -2.13
SPC110YDR356W THI5P43534 340 aa1.72□□□□□ -2.13
SPC110YDR356W THI11P47183 340 aa1.72□□□□□ -2.13
SPC110YDR356W ATP22P50273 684 aaPredicted RBP1.72□□□□□ -2.13
SPC110YDR356W CGR1P53188 120 aa1.72□□□□□ -2.13
SPC110YDR356W OYE2Q03558 400 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W RCF1Q03713 159 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms