RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	LPD1	P09624	499 aa	Known RBP	8.93	□□□□□ -0.98
SKP1	YDR328C	UBP12	P39538	1254 aa		8.92	□□□□□ -0.98
SKP1	YDR328C	SSK22	P25390	1331 aa	Predicted RBP	8.91	□□□□□ -0.98
SKP1	YDR328C	GCD7	P32502	381 aa	Predicted RBP	8.91	□□□□□ -0.98
SKP1	YDR328C	SPO1	P53541	631 aa		8.91	□□□□□ -0.98
SKP1	YDR328C	HGH1	P48362	394 aa	Known RBP	8.9	□□□□□ -0.98
SKP1	YDR328C	ITC1	P53125	1264 aa		8.9	□□□□□ -0.98
SKP1	YDR328C	RAT1	Q02792	1006 aa	Known RBP	8.9	□□□□□ -0.98
SKP1	YDR328C	FCP1	Q03254	732 aa		8.9	□□□□□ -0.98
SKP1	YDR328C	TFA1	P36100	482 aa		8.89	□□□□□ -0.99
SKP1	YDR328C	PKH1	Q03407	766 aa		8.89	□□□□□ -0.99
SKP1	YDR328C	RIX7	Q07844	837 aa	Known RBP	8.89	□□□□□ -0.99
SKP1	YDR328C	CTI6	Q08923	506 aa		8.89	□□□□□ -0.99
SKP1	YDR328C	HAT1	Q12341	374 aa		8.89	□□□□□ -0.99
SKP1	YDR328C	NOP2	P40991	618 aa	Known RBP	8.88	□□□□□ -0.99
SKP1	YDR328C	MTC5	Q03897	1148 aa		8.88	□□□□□ -0.99
SKP1	YDR328C	SAC3	P46674	1301 aa		8.87	□□□□□ -0.99
SKP1	YDR328C	HPC2	Q01448	625 aa		8.87	□□□□□ -0.99
SKP1	YDR328C	PSH1	Q12161	406 aa		8.87	□□□□□ -0.99
SKP1	YDR328C	HXT10	P43581	546 aa		8.86	□□□□□ -0.99
SKP1	YDR328C	DIB1	Q06819	143 aa	Predicted RBP	8.86	□□□□□ -0.99
SKP1	YDR328C	PMD1	P32634	1753 aa		8.86	□□□□□ -0.99
SKP1	YDR328C	BDF2	Q07442	638 aa		8.84	□□□□□ -0.99
SKP1	YDR328C	SUP35	P05453	685 aa	Known RBP	8.83	□□□□□ -1
SKP1	YDR328C	SSF1	P38789	453 aa	Predicted RBP	8.83	□□□□□ -1
SKP1	YDR328C	NMD2	P38798	1089 aa	Known RBP	8.83	□□□□□ -1
SKP1	YDR328C	PFF1	P38244	976 aa		8.82	□□□□□ -1
SKP1	YDR328C	SYF1	Q04048	859 aa	Predicted RBP	8.82	□□□□□ -1
SKP1	YDR328C	ECM16	Q04217	1267 aa	Known RBP	8.82	□□□□□ -1
SKP1	YDR328C	CDC16	P09798	840 aa		8.81	□□□□□ -1
SKP1	YDR328C	ERT1	P38140	529 aa		8.81	□□□□□ -1
SKP1	YDR328C	UBP16	Q02863	499 aa		8.81	□□□□□ -1
SKP1	YDR328C	DUR1,2	P32528	1835 aa	Known RBP	8.81	□□□□□ -1
SKP1	YDR328C	SIT4	P20604	311 aa		8.79	□□□□□ -1
SKP1	YDR328C	NKP2	Q06162	153 aa		8.79	□□□□□ -1
SKP1	YDR328C	GYP5	Q12344	894 aa		8.79	□□□□□ -1
SKP1	YDR328C	SNU66	Q12420	587 aa	Predicted RBP	8.79	□□□□□ -1
SKP1	YDR328C	ADR1	P07248	1323 aa		8.79	□□□□□ -1
SKP1	YDR328C	RFC1	P38630	861 aa	Known RBP	8.78	□□□□□ -1
SKP1	YDR328C	NCB2	Q92317	146 aa		8.78	□□□□□ -1
SKP1	YDR328C	SMY1	P32364	656 aa	Known RBP	8.77	□□□□□ -1.01
SKP1	YDR328C	YKL222C	P35995	705 aa		8.77	□□□□□ -1.01
SKP1	YDR328C	EAF6	P47128	113 aa		8.77	□□□□□ -1.01
SKP1	YDR328C	MSN5	P52918	1224 aa		8.77	□□□□□ -1.01
SKP1	YDR328C	ERO1	Q03103	563 aa		8.77	□□□□□ -1.01
SKP1	YDR328C	IRC3	Q06683	689 aa		8.77	□□□□□ -1.01
SKP1	YDR328C	HKR1	P41809	1802 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	NOT3	P06102	836 aa	Known RBP	8.76	□□□□□ -1.01
SKP1	YDR328C	CAF20	P12962	161 aa	Known RBP	8.76	□□□□□ -1.01
SKP1	YDR328C	RPC31	P17890	251 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	SEC18	P18759	758 aa	Known RBP	8.76	□□□□□ -1.01
SKP1	YDR328C	FRD1	P32614	470 aa	Known RBP	8.76	□□□□□ -1.01
SKP1	YDR328C	KTR3	P38130	404 aa	Predicted RBP	8.76	□□□□□ -1.01
SKP1	YDR328C	ECM21	P38167	1117 aa	Known RBP	8.76	□□□□□ -1.01
SKP1	YDR328C	ICP55	P40051	511 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	BDP1	P46678	594 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	YGL242C	P53066	181 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	DPH6	Q12429	685 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	RAD50	P12753	1312 aa		8.76	□□□□□ -1.01
SKP1	YDR328C	AI2	P03876	854 aa		8.75	□□□□□ -1.01
SKP1	YDR328C	CTT1	P06115	562 aa		8.75	□□□□□ -1.01
SKP1	YDR328C	SLA1	P32790	1244 aa		8.75	□□□□□ -1.01
SKP1	YDR328C	NGR1	P32831	672 aa	Known RBP	8.75	□□□□□ -1.01
SKP1	YDR328C	FIG2	P25653	1609 aa		8.75	□□□□□ -1.01
SKP1	YDR328C	MGM1	P32266	881 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	CWH41	P53008	833 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	MLC1	P53141	149 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	KIN4	Q01919	800 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	SAS4	Q04003	481 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	THI3	Q07471	609 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	FAS2	P19097	1887 aa	Known RBP	8.74	□□□□□ -1.01
SKP1	YDR328C	POM152	P39685	1337 aa		8.74	□□□□□ -1.01
SKP1	YDR328C	RPN1	P38764	993 aa	Known RBP	8.73	□□□□□ -1.01
SKP1	YDR328C	SPL2	P38839	148 aa		8.73	□□□□□ -1.01
SKP1	YDR328C	ALO1	P54783	526 aa	Known RBP	8.73	□□□□□ -1.01
SKP1	YDR328C	PDR18	P53756	1333 aa		8.73	□□□□□ -1.01
SKP1	YDR328C	KRE2	P27809	442 aa		8.72	□□□□□ -1.01
SKP1	YDR328C	GLO3	P38682	493 aa	Known RBP	8.72	□□□□□ -1.01
SKP1	YDR328C	NUG1	P40010	520 aa	Known RBP	8.72	□□□□□ -1.01
SKP1	YDR328C	SRC1	Q03707	834 aa		8.72	□□□□□ -1.01
SKP1	YDR328C	RPN7	Q06103	429 aa	Known RBP	8.72	□□□□□ -1.01
SKP1	YDR328C	HAL5	P38970	855 aa	Known RBP	8.71	□□□□□ -1.02
SKP1	YDR328C	YNL193W	P53870	558 aa		8.71	□□□□□ -1.02
SKP1	YDR328C	MRPS35	P53292	345 aa		8.7	□□□□□ -1.02
SKP1	YDR328C	RPT4	P53549	437 aa	Known RBP	8.7	□□□□□ -1.02
SKP1	YDR328C	BRE1	Q07457	700 aa	Known RBP	8.7	□□□□□ -1.02
SKP1	YDR328C	PIF1	P07271	859 aa		8.69	□□□□□ -1.02
SKP1	YDR328C	EPS1	P40557	701 aa		8.69	□□□□□ -1.02
SKP1	YDR328C	GCR2	Q01722	534 aa		8.69	□□□□□ -1.02
SKP1	YDR328C	RET1	P22276	1149 aa	Known RBP	8.68	□□□□□ -1.02
SKP1	YDR328C	LCB1	P25045	558 aa	Known RBP	8.68	□□□□□ -1.02
SKP1	YDR328C	BRN1	P38170	754 aa		8.68	□□□□□ -1.02
SKP1	YDR328C	YER156C	P40093	338 aa	Known RBP	8.68	□□□□□ -1.02
SKP1	YDR328C	PIB2	P53191	635 aa		8.68	□□□□□ -1.02
SKP1	YDR328C	RMD1	Q03441	430 aa		8.68	□□□□□ -1.02
SKP1	YDR328C	UBX2	Q04228	584 aa		8.68	□□□□□ -1.02
SKP1	YDR328C	GRX6	Q12438	231 aa		8.68	□□□□□ -1.02
SKP1	YDR328C	VAS1	P07806	1104 aa	Known RBP	8.67	□□□□□ -1.02
SKP1	YDR328C	IRC4	Q03036	179 aa		8.67	□□□□□ -1.02
SKP1	YDR328C	RRI2	Q12348	645 aa		8.67	□□□□□ -1.02

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms