RNA–Protein interactions for RNA: YDL182W

LYS20, Transcript of Homocitrate synthase isozyme, yeast

Gene LYS20, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS20	YDL182W	THI22	Q06490	572 aa		10.59	□□□□□ -0.71
LYS20	YDL182W	YLR278C	Q05854	1341 aa		10.58	□□□□□ -0.72
LYS20	YDL182W	THS1	P04801	734 aa	Known RBP	10.57	□□□□□ -0.72
LYS20	YDL182W	YBR287W	P38355	427 aa		10.57	□□□□□ -0.72
LYS20	YDL182W	MAM1	P40065	302 aa		10.57	□□□□□ -0.72
LYS20	YDL182W	SYF1	Q04048	859 aa	Predicted RBP	10.57	□□□□□ -0.72
LYS20	YDL182W	HAT1	Q12341	374 aa		10.57	□□□□□ -0.72
LYS20	YDL182W	SSK22	P25390	1331 aa	Predicted RBP	10.57	□□□□□ -0.72
LYS20	YDL182W	RPS9B	P05755	195 aa	Known RBP	10.56	□□□□□ -0.72
LYS20	YDL182W	FRD1	P32614	470 aa	Known RBP	10.56	□□□□□ -0.72
LYS20	YDL182W	GRX6	Q12438	231 aa		10.56	□□□□□ -0.72
LYS20	YDL182W	RPN1	P38764	993 aa	Known RBP	10.55	□□□□□ -0.72
LYS20	YDL182W	MPP10	P47083	593 aa	Known RBP	10.55	□□□□□ -0.72
LYS20	YDL182W	RTT109	Q07794	436 aa		10.55	□□□□□ -0.72
LYS20	YDL182W	TSR3	Q12094	313 aa	Known RBP	10.55	□□□□□ -0.72
LYS20	YDL182W	HKR1	P41809	1802 aa		10.54	□□□□□ -0.72
LYS20	YDL182W	RTG2	P32608	588 aa	Known RBP	10.53	□□□□□ -0.72
LYS20	YDL182W	YOL057W	Q08225	711 aa		10.53	□□□□□ -0.72
LYS20	YDL182W	FIG2	P25653	1609 aa		10.52	□□□□□ -0.73
LYS20	YDL182W	GAP1	P19145	602 aa	Predicted RBP	10.52	□□□□□ -0.73
LYS20	YDL182W	SAS4	Q04003	481 aa		10.52	□□□□□ -0.73
LYS20	YDL182W	DPL1	Q05567	589 aa		10.52	□□□□□ -0.73
LYS20	YDL182W	YLR271W	Q06152	274 aa		10.52	□□□□□ -0.73
LYS20	YDL182W	GYP7	P48365	746 aa		10.51	□□□□□ -0.73
LYS20	YDL182W	FCP1	Q03254	732 aa		10.51	□□□□□ -0.73
LYS20	YDL182W	HEF3	P53978	1044 aa	Known RBP	10.5	□□□□□ -0.73
LYS20	YDL182W	PRS1	P32895	427 aa	Known RBP	10.49	□□□□□ -0.73
LYS20	YDL182W	SET4	P42948	560 aa		10.49	□□□□□ -0.73
LYS20	YDL182W	SWI1	P09547	1314 aa		10.49	□□□□□ -0.73
LYS20	YDL182W	TOM1	Q03280	3268 aa		10.48	□□□□□ -0.73
LYS20	YDL182W	YDR306C	Q06640	478 aa		10.48	□□□□□ -0.73
LYS20	YDL182W	VHR2	P40041	505 aa		10.47	□□□□□ -0.73
LYS20	YDL182W	FET4	P40988	552 aa		10.47	□□□□□ -0.73
LYS20	YDL182W	DNM1	P54861	757 aa		10.47	□□□□□ -0.73
LYS20	YDL182W	MSM1	P22438	575 aa		10.46	□□□□□ -0.73
LYS20	YDL182W	TPD3	P31383	635 aa		10.46	□□□□□ -0.73
LYS20	YDL182W	GLC3	P32775	704 aa		10.46	□□□□□ -0.73
LYS20	YDL182W	YJR008W	P47085	338 aa		10.46	□□□□□ -0.73
LYS20	YDL182W	SRT1	Q03175	343 aa		10.46	□□□□□ -0.73
LYS20	YDL182W	PKH1	Q03407	766 aa		10.46	□□□□□ -0.73
LYS20	YDL182W	CST6	P40535	587 aa		10.45	□□□□□ -0.74
LYS20	YDL182W	YDL144C	Q07589	356 aa		10.45	□□□□□ -0.74
LYS20	YDL182W	GAS5	Q08193	484 aa		10.45	□□□□□ -0.74
LYS20	YDL182W	TRP5	P00931	707 aa	Known RBP	10.43	□□□□□ -0.74
LYS20	YDL182W	KRE2	P27809	442 aa		10.43	□□□□□ -0.74
LYS20	YDL182W	ETP1	P38748	585 aa	Known RBP	10.43	□□□□□ -0.74
LYS20	YDL182W	ICP55	P40051	511 aa		10.43	□□□□□ -0.74
LYS20	YDL182W	TIM50	Q02776	476 aa		10.43	□□□□□ -0.74
LYS20	YDL182W	NUP133	P36161	1157 aa		10.42	□□□□□ -0.74
LYS20	YDL182W	SPL2	P38839	148 aa		10.42	□□□□□ -0.74
LYS20	YDL182W	YIL089W	P40500	205 aa		10.42	□□□□□ -0.74
LYS20	YDL182W	DUS1	P53759	423 aa	Known RBP	10.42	□□□□□ -0.74
LYS20	YDL182W	RPP0	P05317	312 aa	Known RBP	10.41	□□□□□ -0.74
LYS20	YDL182W	MRP7	P12687	371 aa		10.41	□□□□□ -0.74
LYS20	YDL182W	SET1	P38827	1080 aa	Known RBP	10.41	□□□□□ -0.74
LYS20	YDL182W	VPS4	P52917	437 aa		10.41	□□□□□ -0.74
LYS20	YDL182W	YGR117C	P53270	476 aa		10.41	□□□□□ -0.74
LYS20	YDL182W	TRM44	Q02648	567 aa	Known RBP	10.41	□□□□□ -0.74
LYS20	YDL182W	AIM7	Q12156	149 aa		10.41	□□□□□ -0.74
LYS20	YDL182W	DPH6	Q12429	685 aa		10.41	□□□□□ -0.74
LYS20	YDL182W	STV1	P37296	890 aa		10.4	□□□□□ -0.74
LYS20	YDL182W	ITC1	P53125	1264 aa		10.4	□□□□□ -0.74
LYS20	YDL182W	YGR122W	P53272	402 aa		10.4	□□□□□ -0.74
LYS20	YDL182W	AFG2	P32794	780 aa		10.39	□□□□□ -0.75
LYS20	YDL182W	EMP47	P43555	445 aa		10.39	□□□□□ -0.75
LYS20	YDL182W	RPT4	P53549	437 aa	Known RBP	10.39	□□□□□ -0.75
LYS20	YDL182W	POM152	P39685	1337 aa		10.38	□□□□□ -0.75
LYS20	YDL182W	FLO11	P08640	1367 aa		10.38	□□□□□ -0.75
LYS20	YDL182W	SAC3	P46674	1301 aa		10.37	□□□□□ -0.75
LYS20	YDL182W	MGM1	P32266	881 aa		10.37	□□□□□ -0.75
LYS20	YDL182W	PEA2	P40091	420 aa		10.37	□□□□□ -0.75
LYS20	YDL182W	RRG1	Q12167	365 aa	Predicted RBP	10.37	□□□□□ -0.75
LYS20	YDL182W	HPR1	P17629	752 aa	Known RBP	10.36	□□□□□ -0.75
LYS20	YDL182W	NGR1	P32831	672 aa	Known RBP	10.36	□□□□□ -0.75
LYS20	YDL182W	TIF4632	P39936	914 aa	Known RBP	10.36	□□□□□ -0.75
LYS20	YDL182W	VPS27	P40343	622 aa	Known RBP	10.36	□□□□□ -0.75
LYS20	YDL182W	THI3	Q07471	609 aa		10.36	□□□□□ -0.75
LYS20	YDL182W	CDC45	Q08032	650 aa		10.36	□□□□□ -0.75
LYS20	YDL182W	PSH1	Q12161	406 aa		10.36	□□□□□ -0.75
LYS20	YDL182W	SWC3	P31376	625 aa		10.35	□□□□□ -0.75
LYS20	YDL182W	GSM1	P42950	618 aa		10.35	□□□□□ -0.75
LYS20	YDL182W	HXT10	P43581	546 aa		10.35	□□□□□ -0.75
LYS20	YDL182W	SUI2	P20459	304 aa	Known RBP	10.34	□□□□□ -0.75
LYS20	YDL182W	UBX2	Q04228	584 aa		10.34	□□□□□ -0.75
LYS20	YDL182W	TOS4	Q06266	489 aa		10.34	□□□□□ -0.75
LYS20	YDL182W	RAD24	P32641	659 aa		10.33	□□□□□ -0.76
LYS20	YDL182W	CWC15	Q03772	175 aa	Known RBP	10.33	□□□□□ -0.76
LYS20	YDL182W	CRF1	Q04930	467 aa		10.33	□□□□□ -0.76
LYS20	YDL182W	TYW1	Q08960	810 aa	Known RBP	10.33	□□□□□ -0.76
LYS20	YDL182W	LCB1	P25045	558 aa	Known RBP	10.32	□□□□□ -0.76
LYS20	YDL182W	DUR1,2	P32528	1835 aa	Known RBP	10.31	□□□□□ -0.76
LYS20	YDL182W	UBP12	P39538	1254 aa		10.31	□□□□□ -0.76
LYS20	YDL182W	IRC4	Q03036	179 aa		10.31	□□□□□ -0.76
LYS20	YDL182W	PRP42	Q03776	544 aa	Known RBP	10.31	□□□□□ -0.76
LYS20	YDL182W	MTC5	Q03897	1148 aa		10.31	□□□□□ -0.76
LYS20	YDL182W	PNT1	P38969	423 aa		10.29	□□□□□ -0.76
LYS20	YDL182W	UTP7	P40055	554 aa	Known RBP	10.29	□□□□□ -0.76
LYS20	YDL182W	CBP1	P07252	654 aa		10.28	□□□□□ -0.76
LYS20	YDL182W	YRB30	P53107	440 aa	Predicted RBP	10.28	□□□□□ -0.76
LYS20	YDL182W	HVG1	P0CE11	249 aa		10.27	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms