RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C COG3P40094 801 aa1.5□□□□□ -2.17
TPM2YIL138C YJL016WP47072 561 aa1.5□□□□□ -2.17
TPM2YIL138C TMA22P47089 198 aaPredicted RBP1.5□□□□□ -2.17
TPM2YIL138C FMN1Q03778 218 aa1.5□□□□□ -2.17
TPM2YIL138C PEX12Q04370 399 aa1.5□□□□□ -2.17
TPM2YIL138C YET3Q07451 203 aa1.5□□□□□ -2.17
TPM2YIL138C PAM18Q07914 168 aa1.5□□□□□ -2.17
TPM2YIL138C YPL225WQ08971 146 aaKnown RBP1.5□□□□□ -2.17
TPM2YIL138C YCT1Q12235 531 aa1.5□□□□□ -2.17
TPM2YIL138C EMP46Q12396 444 aa1.5□□□□□ -2.17
TPM2YIL138C SAS5Q99314 248 aa1.5□□□□□ -2.17
TPM2YIL138C GSC2P40989 1895 aa1.5□□□□□ -2.17
TPM2YIL138C HAP2P06774 265 aa1.49□□□□□ -2.17
TPM2YIL138C CMD1P06787 147 aaKnown RBP1.49□□□□□ -2.17
TPM2YIL138C YBR096WP38256 230 aa1.49□□□□□ -2.17
TPM2YIL138C YHR127WP38833 243 aaKnown RBP1.49□□□□□ -2.17
TPM2YIL138C TVP23P38962 199 aa1.49□□□□□ -2.17
TPM2YIL138C TIF34P40217 347 aaKnown RBP1.49□□□□□ -2.17
TPM2YIL138C MNN5P46982 586 aa1.49□□□□□ -2.17
TPM2YIL138C MRH4P53166 561 aa1.49□□□□□ -2.17
TPM2YIL138C PET117Q02771 107 aa1.49□□□□□ -2.17
TPM2YIL138C SYC1Q08553 188 aaPredicted RBP1.49□□□□□ -2.17
TPM2YIL138C CSM4Q08955 156 aa1.49□□□□□ -2.17
TPM2YIL138C GPM2Q12008 311 aa1.49□□□□□ -2.17
TPM2YIL138C ATG31Q12421 196 aa1.49□□□□□ -2.17
TPM2YIL138C SGA1P08019 549 aa1.48□□□□□ -2.17
TPM2YIL138C AVT2P39981 480 aa1.48□□□□□ -2.17
TPM2YIL138C EDC3P39998 551 aaKnown RBP1.48□□□□□ -2.17
TPM2YIL138C RIO2P40160 425 aaKnown RBP1.48□□□□□ -2.17
TPM2YIL138C FMC1P40491 155 aa1.48□□□□□ -2.17
TPM2YIL138C OST2P46964 130 aa1.48□□□□□ -2.17
TPM2YIL138C ILM1P47155 203 aa1.48□□□□□ -2.17
TPM2YIL138C JHD2P47156 728 aaPredicted RBP1.48□□□□□ -2.17
TPM2YIL138C CAB4P53332 305 aa1.48□□□□□ -2.17
TPM2YIL138C CWC21Q03375 135 aaKnown RBP1.48□□□□□ -2.17
TPM2YIL138C CDC123Q05791 360 aa1.48□□□□□ -2.17
TPM2YIL138C YLR053CQ12026 108 aa1.48□□□□□ -2.17
TPM2YIL138C YDR524C-BQ3E6R4 66 aa1.48□□□□□ -2.17
TPM2YIL138C EFG1Q3E705 233 aaKnown RBP1.48□□□□□ -2.17
TPM2YIL138C MSN4P33749 630 aa1.47□□□□□ -2.17
TPM2YIL138C MSA2P36157 363 aa1.47□□□□□ -2.17
TPM2YIL138C LDB7P38210 180 aa1.47□□□□□ -2.17
TPM2YIL138C COS8P38723 381 aa1.47□□□□□ -2.17
TPM2YIL138C YEL028WP39989 153 aa1.47□□□□□ -2.17
TPM2YIL138C THO1P40040 218 aaKnown RBP1.47□□□□□ -2.17
TPM2YIL138C YMR144WP40214 342 aaKnown RBP1.47□□□□□ -2.17
TPM2YIL138C PEP8P40335 379 aa1.47□□□□□ -2.17
TPM2YIL138C MRPL49P40858 161 aaPredicted RBP1.47□□□□□ -2.17
TPM2YIL138C HOC1P47124 396 aa1.47□□□□□ -2.17
TPM2YIL138C NUP84P52891 726 aa1.47□□□□□ -2.17
TPM2YIL138C COS6P53344 381 aa1.47□□□□□ -2.17
TPM2YIL138C SRL4Q03085 281 aa1.47□□□□□ -2.17
TPM2YIL138C RSM10Q03201 203 aa1.47□□□□□ -2.17
TPM2YIL138C GAS3Q03655 524 aa1.47□□□□□ -2.17
TPM2YIL138C GGA1Q06336 557 aa1.47□□□□□ -2.17
TPM2YIL138C SWC7Q06707 132 aa1.47□□□□□ -2.17
TPM2YIL138C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
TPM2YIL138C YOR186WQ08560 144 aa1.47□□□□□ -2.17
TPM2YIL138C OCA6Q12454 224 aa1.47□□□□□ -2.17
TPM2YIL138C YMR030W-AQ3E760 96 aa1.47□□□□□ -2.17
TPM2YIL138C COX5AP00424 153 aa1.46□□□□□ -2.18
TPM2YIL138C IPP1P00817 287 aaKnown RBP1.46□□□□□ -2.18
TPM2YIL138C MRPS28P21771 286 aa1.46□□□□□ -2.18
TPM2YIL138C SCO1P23833 295 aa1.46□□□□□ -2.18
TPM2YIL138C SEC14P24280 304 aaKnown RBP1.46□□□□□ -2.18
TPM2YIL138C YCR016WP25617 290 aaKnown RBP1.46□□□□□ -2.18
TPM2YIL138C YCR090CP25654 182 aaKnown RBP1.46□□□□□ -2.18
TPM2YIL138C RPC19P28000 142 aaKnown RBP1.46□□□□□ -2.18
TPM2YIL138C TFC1P32367 649 aa1.46□□□□□ -2.18
TPM2YIL138C ARC15P40518 154 aaRIP-Chip data1.46□□□□□ -2.18not detected
TPM2YIL138C YIL001WP40560 513 aa1.46□□□□□ -2.18
TPM2YIL138C SNX4P47057 423 aa1.46□□□□□ -2.18
TPM2YIL138C YGL159WP53110 370 aa1.46□□□□□ -2.18
TPM2YIL138C SPG3Q04398 127 aaPredicted RBP1.46□□□□□ -2.18
TPM2YIL138C KRE28Q04431 385 aa1.46□□□□□ -2.18
TPM2YIL138C YLR030WQ07967 263 aa1.46□□□□□ -2.18
TPM2YIL138C YPR202WQ08993 238 aa1.46□□□□□ -2.18
TPM2YIL138C YOR283WQ12040 230 aaKnown RBP1.46□□□□□ -2.18
TPM2YIL138C GET4Q12125 312 aa1.46□□□□□ -2.18
TPM2YIL138C MHT1Q12525 324 aa1.46□□□□□ -2.18
TPM2YIL138C SPT3P06844 337 aa1.45□□□□□ -2.18
TPM2YIL138C YHR032W-AP0C5N6 59 aa1.45□□□□□ -2.18
TPM2YIL138C DSF1P0CX08 502 aa1.45□□□□□ -2.18
TPM2YIL138C YNR073CP0CX09 502 aa1.45□□□□□ -2.18
TPM2YIL138C ERG24P32462 438 aaKnown RBP1.45□□□□□ -2.18
TPM2YIL138C SCM4P32564 187 aa1.45□□□□□ -2.18
TPM2YIL138C RPS1AP33442 255 aaKnown RBP1.45□□□□□ -2.18
TPM2YIL138C CAF4P36130 643 aa1.45□□□□□ -2.18
TPM2YIL138C TRM5P38793 499 aa1.45□□□□□ -2.18
TPM2YIL138C GVP36P40531 326 aaKnown RBP1.45□□□□□ -2.18
TPM2YIL138C DAN1P47178 298 aa1.45□□□□□ -2.18
TPM2YIL138C BOL2P53082 120 aa1.45□□□□□ -2.18
TPM2YIL138C CUS2P53830 285 aaPredicted RBP1.45□□□□□ -2.18
TPM2YIL138C YNL046WP53956 172 aa1.45□□□□□ -2.18
TPM2YIL138C CGI121Q03705 181 aaKnown RBP1.45□□□□□ -2.18
TPM2YIL138C HPT1Q04178 221 aaKnown RBP1.45□□□□□ -2.18
TPM2YIL138C YPR172WQ06608 200 aa1.45□□□□□ -2.18
TPM2YIL138C LDB18Q07887 179 aa1.45□□□□□ -2.18
TPM2YIL138C NSL1Q12143 216 aa1.45□□□□□ -2.18
TPM2YIL138C YLR126CQ12288 251 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms