RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	CDC43	P18898	376 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	AIM17	P23180	465 aa	Known RBP	4.95	□□□□□ -1.62
RBD2	YPL246C	LDS1	P31379	325 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	ERG3	P32353	365 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	YBL010C	P32788	280 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	YKL162C	P36052	402 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	SDH8	P38345	138 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	GPI16	P38875	610 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	YHR210C	P38893	341 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	RFC2	P40348	353 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	BLM10	P43583	2143 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	ATG4	P53867	494 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	GIM3	P53900	129 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	SKO1	Q02100	647 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	RTT103	Q05543	409 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	NNT1	Q05874	261 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	DXO1	Q06349	442 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	CTS2	Q06350	511 aa		4.95	□□□□□ -1.62
RBD2	YPL246C	PRS5	Q12265	496 aa	Known RBP	4.95	□□□□□ -1.62
RBD2	YPL246C	ACC1	Q00955	2233 aa	Known RBP	4.95	□□□□□ -1.62
RBD2	YPL246C	IPP1	P00817	287 aa	Known RBP	4.94	□□□□□ -1.62
RBD2	YPL246C	MES1	P00958	751 aa	Known RBP	4.94	□□□□□ -1.62
RBD2	YPL246C	SSA3	P09435	649 aa	Known RBP	4.94	□□□□□ -1.62
RBD2	YPL246C	ZRC1	P20107	442 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	MCM10	P32354	571 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	YER010C	P40011	234 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	SLZ1	P40167	298 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	EMC5	P40540	141 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	ASK10	P48361	1146 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	LCL3	P53153	274 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	CAB5	Q03941	241 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	THI74	Q04083	370 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	DIC1	Q06143	298 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	SDO1	Q07953	250 aa	Known RBP	4.94	□□□□□ -1.62
RBD2	YPL246C	SCP1	Q08873	200 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	YHR214C-E	Q8TGK0	99 aa		4.94	□□□□□ -1.62
RBD2	YPL246C	CDC39	P25655	2108 aa	Known RBP	4.93	□□□□□ -1.62
RBD2	YPL246C	MIR1	P23641	311 aa	Known RBP	4.93	□□□□□ -1.62
RBD2	YPL246C	FEN2	P25621	512 aa	Known RBP	4.93	□□□□□ -1.62
RBD2	YPL246C	EHD3	P28817	500 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	PMT2	P31382	759 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	AFG1	P32317	509 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	UTH1	P36135	365 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	IKI1	P38874	309 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	LNP1	P38878	278 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	IDP2	P41939	412 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	CTK2	P46962	323 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	MRX5	P47007	382 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	MSY1	P48527	492 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	BSC5	P53755	489 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	RDL2	Q08742	149 aa	Known RBP	4.93	□□□□□ -1.62
RBD2	YPL246C	SRL2	Q12020	392 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RBD2	YPL246C	SNU23	Q12368	194 aa	Predicted RBP	4.93	□□□□□ -1.62
RBD2	YPL246C	ISA2	Q12425	185 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	YLR146W-A	Q2V2P1	62 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	UBA3	Q99344	299 aa		4.93	□□□□□ -1.62
RBD2	YPL246C	YAL064W-B	O13512	126 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	QCR2	P07257	368 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	MSK1	P32048	576 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	ECM25	P32525	599 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	FAT1	P38225	669 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	ARC40	P38328	384 aa	Known RBP	4.92	□□□□□ -1.62
RBD2	YPL246C	PRS3	P38689	320 aa	Known RBP	4.92	□□□□□ -1.62
RBD2	YPL246C	YEA6	P39953	335 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	NSE4	P43124	402 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	GWT1	P47026	490 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	SRB7	P47822	140 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	SOL1	P50278	321 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	NSA1	P53136	463 aa	Predicted RBP	4.92	□□□□□ -1.62
RBD2	YPL246C	APJ1	P53940	528 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	YVH1	Q02256	364 aa	Known RBP	4.92	□□□□□ -1.62
RBD2	YPL246C	ATG21	Q02887	496 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	ERP1	Q05359	219 aa	Known RBP	4.92	□□□□□ -1.62
RBD2	YPL246C	YDL086W	Q07505	273 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	USV1	Q12132	391 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	HUT1	Q12520	339 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	COX19	Q3E731	98 aa		4.92	□□□□□ -1.62
RBD2	YPL246C	COX5B	P00425	151 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	MSW1	P04803	379 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	NAM2	P11325	894 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	UBS1	P38290	277 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	YND1	P40009	630 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	YIL077C	P40508	320 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	NIT2	P47016	307 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	ADO1	P47143	340 aa	Known RBP	4.91	□□□□□ -1.62
RBD2	YPL246C	PGU1	P47180	361 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	PKP2	P53170	491 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	VPS28	Q02767	242 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	YMR253C	Q04835	414 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	YCT1	Q12235	531 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	VAM3	Q12241	283 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	DGK1	Q12382	290 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	PAR32	Q12515	295 aa	Known RBP	4.91	□□□□□ -1.62
RBD2	YPL246C	FLO9	P39712	1322 aa		4.91	□□□□□ -1.62
RBD2	YPL246C	COX1	P00401	534 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	SCEI	P03882	235 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	YML003W	P0CF16	290 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	APA2	P22108	325 aa		4.9	□□□□□ -1.63
RBD2	YPL246C	IFM1	P25038	676 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms