RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C SEO1P39709 593 aa3.41□□□□□ -1.86
RPB7YDR404C EDC2P40023 145 aaPredicted RBP3.41□□□□□ -1.86
RPB7YDR404C OTU1P43558 301 aa3.41□□□□□ -1.86
RPB7YDR404C FMP41P53889 259 aaKnown RBP3.41□□□□□ -1.86
RPB7YDR404C YNL095CP53932 642 aa3.41□□□□□ -1.86
RPB7YDR404C PIN3Q06449 215 aa3.41□□□□□ -1.86
RPB7YDR404C CSM4Q08955 156 aa3.41□□□□□ -1.86
RPB7YDR404C AKR2Q12013 749 aa3.41□□□□□ -1.86
RPB7YDR404C SNF8Q12483 233 aa3.41□□□□□ -1.86
RPB7YDR404C BLM10P43583 2143 aa3.41□□□□□ -1.86
RPB7YDR404C CAM1P29547 415 aaKnown RBP3.4□□□□□ -1.87
RPB7YDR404C TRM7P38238 310 aaKnown RBP3.4□□□□□ -1.87
RPB7YDR404C ASP1P38986 381 aaPredicted RBP3.4□□□□□ -1.87
RPB7YDR404C MSS2P40990 351 aa3.4□□□□□ -1.87
RPB7YDR404C BUD13P46947 266 aaPredicted RBP3.4□□□□□ -1.87
RPB7YDR404C HOC1P47124 396 aa3.4□□□□□ -1.87
RPB7YDR404C CAX4P53223 239 aa3.4□□□□□ -1.87
RPB7YDR404C YDR222WQ04925 415 aa3.4□□□□□ -1.87
RPB7YDR404C TPO4Q12256 659 aa3.4□□□□□ -1.87
RPB7YDR404C YPL119C-AQ3E751 87 aa3.4□□□□□ -1.87
RPB7YDR404C HOM6P31116 359 aaKnown RBP3.39□□□□□ -1.87
RPB7YDR404C JEN1P36035 616 aa3.39□□□□□ -1.87
RPB7YDR404C POP8P38208 133 aa3.39□□□□□ -1.87
RPB7YDR404C MED8P38304 223 aa3.39□□□□□ -1.87
RPB7YDR404C ASI3P53983 676 aa3.39□□□□□ -1.87
RPB7YDR404C EFG1Q3E705 233 aaKnown RBP3.39□□□□□ -1.87
RPB7YDR404C BPH1P25356 2167 aa3.38□□□□□ -1.87
RPB7YDR404C RPO26P20435 155 aa3.38□□□□□ -1.87
RPB7YDR404C EHD3P28817 500 aa3.38□□□□□ -1.87
RPB7YDR404C CAT2P32796 670 aaKnown RBP3.38□□□□□ -1.87
RPB7YDR404C YKT6P36015 200 aaKnown RBP3.38□□□□□ -1.87
RPB7YDR404C HEK2P38199 381 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
RPB7YDR404C YHL049CP38722 271 aa3.38□□□□□ -1.87
RPB7YDR404C FRT2P39734 528 aa3.38□□□□□ -1.87
RPB7YDR404C AVT6P40074 448 aa3.38□□□□□ -1.87
RPB7YDR404C YFL012WP43580 148 aa3.38□□□□□ -1.87
RPB7YDR404C USE1P53146 245 aa3.38□□□□□ -1.87
RPB7YDR404C CTF19Q02732 369 aa3.38□□□□□ -1.87
RPB7YDR404C LDB18Q07887 179 aa3.38□□□□□ -1.87
RPB7YDR404C SEY1Q99287 776 aa3.38□□□□□ -1.87
RPB7YDR404C SOD1P00445 154 aaKnown RBP3.37□□□□□ -1.87
RPB7YDR404C PHO80P20052 293 aa3.37□□□□□ -1.87
RPB7YDR404C RPB4P20433 221 aaPredicted RBP3.37□□□□□ -1.87
RPB7YDR404C SFC1P33303 322 aa3.37□□□□□ -1.87
RPB7YDR404C MRPS9P38120 278 aa3.37□□□□□ -1.87
RPB7YDR404C YBR096WP38256 230 aa3.37□□□□□ -1.87
RPB7YDR404C AIM18P38884 321 aa3.37□□□□□ -1.87
RPB7YDR404C BDH1P39714 382 aa3.37□□□□□ -1.87
RPB7YDR404C YGR067CP53243 804 aa3.37□□□□□ -1.87
RPB7YDR404C YDL211CQ12121 372 aa3.37□□□□□ -1.87
RPB7YDR404C YCT1Q12235 531 aa3.37□□□□□ -1.87
RPB7YDR404C RHO1P06780 209 aaKnown RBP3.36□□□□□ -1.87
RPB7YDR404C FUS3P16892 353 aaKnown RBP3.36□□□□□ -1.87
RPB7YDR404C PRP18P33411 251 aaPredicted RBP3.36□□□□□ -1.87
RPB7YDR404C RPS27AP35997 82 aaKnown RBP3.36□□□□□ -1.87
RPB7YDR404C PHO89P38361 574 aa3.36□□□□□ -1.87
RPB7YDR404C RPS27BP38711 82 aa3.36□□□□□ -1.87
RPB7YDR404C SYS1P41544 203 aa3.36□□□□□ -1.87
RPB7YDR404C CUP9P41817 306 aa3.36□□□□□ -1.87
RPB7YDR404C ZRG17P53735 605 aa3.36□□□□□ -1.87
RPB7YDR404C PEX10Q05568 337 aa3.36□□□□□ -1.87
RPB7YDR404C SPO77Q06134 477 aa3.36□□□□□ -1.87
RPB7YDR404C MRPL25P23369 157 aa3.35□□□□□ -1.87
RPB7YDR404C PPA2P28239 310 aa3.35□□□□□ -1.87
RPB7YDR404C MGM101P32787 269 aaKnown RBP3.35□□□□□ -1.87
RPB7YDR404C GIM4P40005 111 aaKnown RBP3.35□□□□□ -1.87
RPB7YDR404C THO1P40040 218 aaKnown RBP3.35□□□□□ -1.87
RPB7YDR404C UFD1P53044 361 aa3.35□□□□□ -1.87
RPB7YDR404C SWT21P53873 357 aaPredicted RBP3.35□□□□□ -1.87
RPB7YDR404C TRM12Q04235 462 aa3.35□□□□□ -1.87
RPB7YDR404C MRX8Q05473 314 aa3.35□□□□□ -1.87
RPB7YDR404C MDM32Q12171 622 aa3.35□□□□□ -1.87
RPB7YDR404C RFM1Q12192 310 aa3.35□□□□□ -1.87
RPB7YDR404C MDM35O60200 86 aa3.34□□□□□ -1.87
RPB7YDR404C RPL24BP24000 155 aaKnown RBP3.34□□□□□ -1.87
RPB7YDR404C PBN1P25580 416 aa3.34□□□□□ -1.87
RPB7YDR404C MEI4P29467 408 aa3.34□□□□□ -1.87
RPB7YDR404C ERG2P32352 222 aa3.34□□□□□ -1.87
RPB7YDR404C YET1P35723 206 aa3.34□□□□□ -1.87
RPB7YDR404C YBL081WP38180 368 aaKnown RBP3.34□□□□□ -1.87
RPB7YDR404C OSH6Q02201 448 aa3.34□□□□□ -1.87
RPB7YDR404C SMD1Q02260 146 aaPredicted RBP3.34□□□□□ -1.87
RPB7YDR404C GTO3Q04806 366 aa3.34□□□□□ -1.87
RPB7YDR404C YDR278CQ05612 105 aa3.34□□□□□ -1.87
RPB7YDR404C NNT1Q05874 261 aa3.34□□□□□ -1.87
RPB7YDR404C DCR2Q05924 578 aa3.34□□□□□ -1.87
RPB7YDR404C YPR098CQ06089 161 aa3.34□□□□□ -1.87
RPB7YDR404C ATG17Q06410 417 aa3.34□□□□□ -1.87
RPB7YDR404C COQ10Q08058 207 aa3.34□□□□□ -1.87
RPB7YDR404C RRS1Q08746 203 aaKnown RBP3.34□□□□□ -1.87
RPB7YDR404C SNU23Q12368 194 aaPredicted RBP3.34□□□□□ -1.87
RPB7YDR404C ATG5Q12380 294 aa3.34□□□□□ -1.87
RPB7YDR404C ADF1Q2V2Q1 113 aa3.34□□□□□ -1.87
RPB7YDR404C SLH1P53327 1967 aaKnown RBP3.34□□□□□ -1.88
RPB7YDR404C THP2O13539 261 aaKnown RBP3.33□□□□□ -1.88
RPB7YDR404C CDC36P06100 191 aaPredicted RBP3.33□□□□□ -1.88
RPB7YDR404C COS2P0CX12 379 aa3.33□□□□□ -1.88
RPB7YDR404C COS3P0CX13 379 aa3.33□□□□□ -1.88
RPB7YDR404C NHP6BP11633 99 aaKnown RBP3.33□□□□□ -1.88
RPB7YDR404C CPT1P17898 393 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms