RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	RPS16B	P0CX52	143 aa	Known RBP	4.09	□□□□□ -1.76
SUP35	YDR172W	SPO7	P18410	259 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	COS8	P38723	381 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	YIR035C	P40579	254 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	IDP2	P41939	412 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	LSM1	P47017	172 aa	Known RBP	4.09	□□□□□ -1.76
SUP35	YDR172W	SRB7	P47822	140 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	HSV2	P50079	448 aa	Predicted RBP	4.09	□□□□□ -1.76
SUP35	YDR172W	NIF3	P53081	288 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	ALG9	P53868	555 aa	Known RBP	4.09	□□□□□ -1.76
SUP35	YDR172W	ERV25	P54837	211 aa	Known RBP	4.09	□□□□□ -1.76
SUP35	YDR172W	RRT7	Q07829	113 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	RRI1	Q12468	440 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	CDC36	P06100	191 aa	Predicted RBP	4.08	□□□□□ -1.76
SUP35	YDR172W	YND1	P40009	630 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	SWM2	P40342	146 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	IKS1	P47042	667 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	YJL016W	P47072	561 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	YGL117W	P53133	265 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	HOL1	P53389	586 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	RTT103	Q05543	409 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	GRE1	Q08969	168 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	YLR108C	Q12259	485 aa		4.08	□□□□□ -1.76
SUP35	YDR172W	CDC39	P25655	2108 aa	Known RBP	4.08	□□□□□ -1.76
SUP35	YDR172W	MRS4	P23500	304 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	AFG1	P32317	509 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	ERG3	P32353	365 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	PDC2	P32896	925 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	GLR1	P41921	483 aa	Known RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	HAM1	P47119	197 aa	Known RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	AVT4	P50944	713 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	UFD1	P53044	361 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	ATG4	P53867	494 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	SMX3	P54999	86 aa	Predicted RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	EST3	Q03096	181 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	REP2	P03872	296 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	TRR1	P29509	319 aa	Known RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	YPC1	P38298	316 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	LSM12	P38828	187 aa	Known RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	GCV3	P39726	170 aa	Predicted RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	YJR011C	P47086	261 aa	Predicted RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	PCP1	P53259	346 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	CWC25	P53854	179 aa	Known RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	CAB5	Q03941	241 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	DCS1	Q06151	350 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	NOC4	Q06512	552 aa	Predicted RBP	4.07	□□□□□ -1.76
SUP35	YDR172W	SCP1	Q08873	200 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	HUT1	Q12520	339 aa		4.07	□□□□□ -1.76
SUP35	YDR172W	RPP2A	P05319	106 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	NAM2	P11325	894 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	RPL30	P14120	105 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	OLE1	P21147	510 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	SHM2	P37291	469 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	MTC6	P38849	526 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	ASP1	P38986	381 aa	Predicted RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	MOB2	P43563	287 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	GWT1	P47026	490 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	SNN1	P48232	102 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	PHO23	P50947	330 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	NSA1	P53136	463 aa	Predicted RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	HHT1	P61830	136 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	ODC1	Q03028	310 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	COQ11	Q05892	277 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	BER1	Q06688	274 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	Q0144	Q9ZZW2	109 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	CDC28	P00546	298 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	SEC62	P21825	274 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	IFM1	P25038	676 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	RFA3	P26755	122 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	CBT1	P36038	271 aa	Predicted RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	AGX1	P43567	385 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	SSN8	P47821	323 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	PNC1	P53184	216 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	RSM23	Q01163	450 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	SKO1	Q02100	647 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	DIG2	Q03373	323 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	THI74	Q04083	370 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	NCE102	Q12207	173 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
SUP35	YDR172W	YLR146W-A	Q2V2P1	62 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	LSO2	Q3E772	92 aa	Known RBP	4.06	□□□□□ -1.76
SUP35	YDR172W	UBA3	Q99344	299 aa		4.06	□□□□□ -1.76
SUP35	YDR172W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SUP35	YDR172W	ARO3	P14843	370 aa	Known RBP	4.05	□□□□□ -1.76
SUP35	YDR172W	MIR1	P23641	311 aa	Known RBP	4.05	□□□□□ -1.76
SUP35	YDR172W	CNB1	P25296	175 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	SWD2	P36104	329 aa	Predicted RBP	4.05	□□□□□ -1.76
SUP35	YDR172W	FAT1	P38225	669 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	SEC24	P40482	926 aa	Known RBP	4.05	□□□□□ -1.76
SUP35	YDR172W	PHB1	P40961	287 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	MCM22	P47167	239 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	BUL1	P48524	976 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	YNR048W	P53740	393 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	YDR387C	Q04162	555 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	MRX9	Q07349	420 aa	Known RBP	4.05	□□□□□ -1.76
SUP35	YDR172W	VAM3	Q12241	283 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	YHR213W-A	Q8TGT4	77 aa		4.05	□□□□□ -1.76
SUP35	YDR172W	CBP6	P07253	162 aa	Predicted RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	QCR2	P07257	368 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	SSA3	P09435	649 aa	Known RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	SPC29	P33419	253 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms