RNA–Protein interactions for RNA: YCR039C

MATALPHA2, Transcript of Homeobox-domain protein, yeastyeast

Gene MATALPHA2, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA2YCR039C NUP57P48837 541 aa0.82□□□□□ -2.28
MATALPHA2YCR039C YML096WQ04489 525 aa0.82□□□□□ -2.28
MATALPHA2YCR039C SSQ1Q05931 657 aaPredicted RBP0.82□□□□□ -2.28
MATALPHA2YCR039C MSH5Q12175 901 aa0.82□□□□□ -2.28
MATALPHA2YCR039C YHR139C-AO13536 103 aa0.81□□□□□ -2.28
MATALPHA2YCR039C RIB1P38066 345 aa0.81□□□□□ -2.28
MATALPHA2YCR039C SPG3Q04398 127 aaPredicted RBP0.81□□□□□ -2.28
MATALPHA2YCR039C RIO1Q12196 484 aaKnown RBP0.81□□□□□ -2.28
MATALPHA2YCR039C CYR1P08678 2026 aaKnown RBP0.81□□□□□ -2.28
MATALPHA2YCR039C MEI4P29467 408 aa0.8□□□□□ -2.28
MATALPHA2YCR039C FZF1P32805 299 aa0.8□□□□□ -2.28
MATALPHA2YCR039C YKL075CP36083 450 aa0.8□□□□□ -2.28
MATALPHA2YCR039C YNL217WP40152 326 aa0.8□□□□□ -2.28
MATALPHA2YCR039C PGD1P40356 397 aa0.8□□□□□ -2.28
MATALPHA2YCR039C ICE2P40499 491 aa0.8□□□□□ -2.28
MATALPHA2YCR039C BOL2P53082 120 aa0.8□□□□□ -2.28
MATALPHA2YCR039C TRM12Q04235 462 aa0.8□□□□□ -2.28
MATALPHA2YCR039C RPL27BP0C2H7 136 aaKnown RBP0.79□□□□□ -2.28
MATALPHA2YCR039C YPR170W-BP0C5R9 85 aa0.79□□□□□ -2.28
MATALPHA2YCR039C RIB7P33312 244 aa0.79□□□□□ -2.28
MATALPHA2YCR039C YRB2P40517 327 aa0.79□□□□□ -2.28
MATALPHA2YCR039C KAP95Q06142 861 aaKnown RBP0.79□□□□□ -2.28
MATALPHA2YCR039C PSF1Q12488 208 aa0.79□□□□□ -2.28
MATALPHA2YCR039C TCD1P38756 429 aa0.78□□□□□ -2.28
MATALPHA2YCR039C BNA6P43619 295 aa0.78□□□□□ -2.28
MATALPHA2YCR039C HOC1P47124 396 aa0.78□□□□□ -2.28
MATALPHA2YCR039C GPI8P49018 411 aa0.78□□□□□ -2.28
MATALPHA2YCR039C AIF1P52923 378 aa0.78□□□□□ -2.28
MATALPHA2YCR039C ABF2Q02486 183 aa0.78□□□□□ -2.28
MATALPHA2YCR039C CPA1P07258 411 aaKnown RBP0.77□□□□□ -2.29
MATALPHA2YCR039C VPS21P36017 210 aaKnown RBP0.77□□□□□ -2.29
MATALPHA2YCR039C RSM25P40496 264 aa0.77□□□□□ -2.29
MATALPHA2YCR039C YMD8Q03697 442 aa0.77□□□□□ -2.29
MATALPHA2YCR039C RPT5P33297 434 aaKnown RBP0.76□□□□□ -2.29
MATALPHA2YCR039C GAA1P39012 614 aa0.76□□□□□ -2.29
MATALPHA2YCR039C PEX17P40155 199 aa0.76□□□□□ -2.29
MATALPHA2YCR039C YNL010WP53981 241 aaKnown RBP0.76□□□□□ -2.29
MATALPHA2YCR039C PAM18Q07914 168 aa0.76□□□□□ -2.29
MATALPHA2YCR039C RRP36Q12481 300 aaPredicted RBP0.76□□□□□ -2.29
MATALPHA2YCR039C MET5P47169 1442 aa0.75□□□□□ -2.29
MATALPHA2YCR039C MRPS28P21771 286 aa0.75□□□□□ -2.29
MATALPHA2YCR039C TMA19P35691 167 aaKnown RBP0.75□□□□□ -2.29
MATALPHA2YCR039C URA8P38627 578 aaPredicted RBP0.75□□□□□ -2.29
MATALPHA2YCR039C RPL37AP49166 88 aaKnown RBP0.75□□□□□ -2.29
MATALPHA2YCR039C TRM9P49957 279 aa0.75□□□□□ -2.29
MATALPHA2YCR039C MPA43P53583 542 aaPredicted RBP0.75□□□□□ -2.29
MATALPHA2YCR039C MRPL50P53724 139 aa0.75□□□□□ -2.29
MATALPHA2YCR039C YNR077CP53758 84 aa0.75□□□□□ -2.29
MATALPHA2YCR039C YNL134CP53912 376 aaKnown RBP0.75□□□□□ -2.29
MATALPHA2YCR039C RRT8Q08219 342 aa0.75□□□□□ -2.29
MATALPHA2YCR039C YPL162CQ12042 273 aa0.75□□□□□ -2.29
MATALPHA2YCR039C PDR18P53756 1333 aa0.74□□□□□ -2.29
MATALPHA2YCR039C VAR1P02381 398 aa0.74□□□□□ -2.29
MATALPHA2YCR039C ATG22P25568 528 aa0.74□□□□□ -2.29
MATALPHA2YCR039C SRB4P32569 687 aa0.74□□□□□ -2.29
MATALPHA2YCR039C YET1P35723 206 aa0.74□□□□□ -2.29
MATALPHA2YCR039C IRC22P40006 225 aa0.74□□□□□ -2.29
MATALPHA2YCR039C YJR149WP47177 404 aa0.74□□□□□ -2.29
MATALPHA2YCR039C DOC1P53068 250 aa0.74□□□□□ -2.29
MATALPHA2YCR039C SAY1P53324 424 aa0.74□□□□□ -2.29
MATALPHA2YCR039C UBC7Q02159 165 aa0.74□□□□□ -2.29
MATALPHA2YCR039C SNZ1Q03148 297 aa0.74□□□□□ -2.29
MATALPHA2YCR039C LPP1Q04396 274 aa0.74□□□□□ -2.29
MATALPHA2YCR039C ANT1Q06497 328 aa0.74□□□□□ -2.29
MATALPHA2YCR039C ATG31Q12421 196 aa0.74□□□□□ -2.29
MATALPHA2YCR039C REP2P03872 296 aa0.73□□□□□ -2.29
MATALPHA2YCR039C YLR156WP0CE96 114 aa0.73□□□□□ -2.29
MATALPHA2YCR039C YLR159WP0CE97 114 aa0.73□□□□□ -2.29
MATALPHA2YCR039C YLR161WP0CE98 114 aa0.73□□□□□ -2.29
MATALPHA2YCR039C YUH1P35127 236 aa0.73□□□□□ -2.29
MATALPHA2YCR039C CUE1P38428 203 aa0.73□□□□□ -2.29
MATALPHA2YCR039C DOG2P38773 246 aa0.73□□□□□ -2.29
MATALPHA2YCR039C YER076CP40049 302 aa0.73□□□□□ -2.29
MATALPHA2YCR039C MCM22P47167 239 aa0.73□□□□□ -2.29
MATALPHA2YCR039C NSA1P53136 463 aaPredicted RBP0.73□□□□□ -2.29
MATALPHA2YCR039C KRE28Q04431 385 aa0.73□□□□□ -2.29
MATALPHA2YCR039C MSB2P32334 1306 aa0.72□□□□□ -2.29
MATALPHA2YCR039C MRPL25P23369 157 aa0.72□□□□□ -2.29
MATALPHA2YCR039C ERJ5P43613 295 aaPredicted RBP0.72□□□□□ -2.29
MATALPHA2YCR039C YML108WQ03759 105 aa0.72□□□□□ -2.29
MATALPHA2YCR039C YLR173WQ06247 608 aa0.72□□□□□ -2.29
MATALPHA2YCR039C TUS1Q06412 1307 aa0.71□□□□□ -2.3
MATALPHA2YCR039C CDC10P25342 322 aaKnown RBP0.71□□□□□ -2.3
MATALPHA2YCR039C NTF2P33331 125 aaKnown RBP0.71□□□□□ -2.3
MATALPHA2YCR039C MRPL28P36527 147 aa0.71□□□□□ -2.3
MATALPHA2YCR039C LDB7P38210 180 aa0.71□□□□□ -2.3
MATALPHA2YCR039C UMP1P38293 148 aa0.71□□□□□ -2.3
MATALPHA2YCR039C POP4P38336 279 aa0.71□□□□□ -2.3
MATALPHA2YCR039C BCY1P07278 416 aaKnown RBP0.7□□□□□ -2.3
MATALPHA2YCR039C TVP38P36164 337 aa0.7□□□□□ -2.3
MATALPHA2YCR039C MRPL17P36528 281 aa0.7□□□□□ -2.3
MATALPHA2YCR039C RIO2P40160 425 aaKnown RBP0.7□□□□□ -2.3
MATALPHA2YCR039C EAF6P47128 113 aa0.7□□□□□ -2.3
MATALPHA2YCR039C POP3P53833 195 aaPredicted RBP0.7□□□□□ -2.3
MATALPHA2YCR039C NOP13P53883 403 aaKnown RBP RIP-Chip data0.7□□□□□ -2.3not detected
MATALPHA2YCR039C DID2P69771 204 aa0.7□□□□□ -2.3
MATALPHA2YCR039C GAS3Q03655 524 aa0.7□□□□□ -2.3
MATALPHA2YCR039C YDR248CQ03786 193 aa0.7□□□□□ -2.3
MATALPHA2YCR039C YDL180WQ12301 547 aa0.7□□□□□ -2.3
MATALPHA2YCR039C LSO2Q3E772 92 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms