RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeastyeast

Gene CTL1, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTL1YMR180C CWC21Q03375 135 aaKnown RBP2.21□□□□□ -2.06
CTL1YMR180C INM2Q05533 292 aa2.21□□□□□ -2.06
CTL1YMR180C YLR173WQ06247 608 aa2.21□□□□□ -2.06
CTL1YMR180C YPR172WQ06608 200 aa2.21□□□□□ -2.06
CTL1YMR180C MSH5Q12175 901 aa2.21□□□□□ -2.06
CTL1YMR180C YCT1Q12235 531 aa2.21□□□□□ -2.06
CTL1YMR180C TCD1P38756 429 aa2.2□□□□□ -2.06
CTL1YMR180C BFR1P38934 470 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CTL1YMR180C JHD2P47156 728 aaPredicted RBP2.2□□□□□ -2.06
CTL1YMR180C YGR026WP53217 278 aa2.2□□□□□ -2.06
CTL1YMR180C GTR2P53290 341 aa2.2□□□□□ -2.06
CTL1YMR180C RHO3Q00245 231 aaKnown RBP2.2□□□□□ -2.06
CTL1YMR180C CSM4Q08955 156 aa2.2□□□□□ -2.06
CTL1YMR180C BOL1Q3E793 110 aa2.2□□□□□ -2.06
CTL1YMR180C TCP1P12612 559 aaKnown RBP2.19□□□□□ -2.06
CTL1YMR180C SCL1P21243 252 aaKnown RBP2.19□□□□□ -2.06
CTL1YMR180C NTG1P31378 399 aa2.19□□□□□ -2.06
CTL1YMR180C FMC1P40491 155 aa2.19□□□□□ -2.06
CTL1YMR180C MRPS8Q03799 155 aa2.19□□□□□ -2.06
CTL1YMR180C MSA1Q08471 629 aa2.19□□□□□ -2.06
CTL1YMR180C ATO3Q12359 275 aa2.19□□□□□ -2.06
CTL1YMR180C YPL229WQ99395 206 aa2.19□□□□□ -2.06
CTL1YMR180C RPS5P26783 225 aaKnown RBP2.18□□□□□ -2.06
CTL1YMR180C SRB4P32569 687 aa2.18□□□□□ -2.06
CTL1YMR180C GCN20P43535 752 aaKnown RBP2.18□□□□□ -2.06
CTL1YMR180C DSF1P0CX08 502 aa2.17□□□□□ -2.06
CTL1YMR180C YNR073CP0CX09 502 aa2.17□□□□□ -2.06
CTL1YMR180C PEX4P29340 183 aa2.17□□□□□ -2.06
CTL1YMR180C VMA11P32842 164 aa2.17□□□□□ -2.06
CTL1YMR180C YHR127WP38833 243 aaKnown RBP2.17□□□□□ -2.06
CTL1YMR180C BNA6P43619 295 aa2.17□□□□□ -2.06
CTL1YMR180C YJR079WP47126 109 aa2.17□□□□□ -2.06
CTL1YMR180C YNL134CP53912 376 aaKnown RBP2.17□□□□□ -2.06
CTL1YMR180C PET117Q02771 107 aa2.17□□□□□ -2.06
CTL1YMR180C SRL4Q03085 281 aa2.17□□□□□ -2.06
CTL1YMR180C RNH1Q04740 348 aa2.17□□□□□ -2.06
CTL1YMR180C SEI1Q06058 285 aa2.17□□□□□ -2.06
CTL1YMR180C YPL257WQ08974 193 aa2.17□□□□□ -2.06
CTL1YMR180C SNU23Q12368 194 aaPredicted RBP2.17□□□□□ -2.06
CTL1YMR180C SIR4P11978 1358 aa2.16□□□□□ -2.06
CTL1YMR180C ERD2P18414 219 aa2.16□□□□□ -2.06
CTL1YMR180C RMR1P53060 241 aa2.16□□□□□ -2.06
CTL1YMR180C KRE28Q04431 385 aa2.16□□□□□ -2.06
CTL1YMR180C IPP1P00817 287 aaKnown RBP2.15□□□□□ -2.07
CTL1YMR180C FBA1P14540 359 aaKnown RBP2.15□□□□□ -2.07
CTL1YMR180C YPT52P36018 234 aaKnown RBP2.15□□□□□ -2.07
CTL1YMR180C YKL075CP36083 450 aa2.15□□□□□ -2.07
CTL1YMR180C FIS1P40515 155 aa2.15□□□□□ -2.07
CTL1YMR180C HOC1P47124 396 aa2.15□□□□□ -2.07
CTL1YMR180C PAM18Q07914 168 aa2.15□□□□□ -2.07
CTL1YMR180C ATG31Q12421 196 aa2.15□□□□□ -2.07
CTL1YMR180C YHR139C-AO13536 103 aa2.14□□□□□ -2.07
CTL1YMR180C RPB4P20433 221 aaPredicted RBP2.14□□□□□ -2.07
CTL1YMR180C YCR016WP25617 290 aaKnown RBP2.14□□□□□ -2.07
CTL1YMR180C MDH3P32419 343 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CTL1YMR180C RPA43P46669 326 aa2.14□□□□□ -2.07
CTL1YMR180C CIS3P47001 227 aa2.14□□□□□ -2.07
CTL1YMR180C CGR1P53188 120 aa2.14□□□□□ -2.07
CTL1YMR180C TIM11P81449 96 aaPredicted RBP2.14□□□□□ -2.07
CTL1YMR180C YLR283WQ05867 314 aa2.14□□□□□ -2.07
CTL1YMR180C ATG39Q06159 398 aa2.14□□□□□ -2.07
CTL1YMR180C NIP7Q08962 181 aaKnown RBP2.14□□□□□ -2.07
CTL1YMR180C YLR126CQ12288 251 aa2.14□□□□□ -2.07
CTL1YMR180C HTL1Q9URQ5 78 aa2.14□□□□□ -2.07
CTL1YMR180C CDC7P06243 507 aa2.13□□□□□ -2.07
CTL1YMR180C SNA3P14359 133 aa2.13□□□□□ -2.07
CTL1YMR180C BMH2P34730 273 aaKnown RBP2.13□□□□□ -2.07
CTL1YMR180C PHO88P38264 188 aaPredicted RBP2.13□□□□□ -2.07
CTL1YMR180C PEP8P40335 379 aa2.13□□□□□ -2.07
CTL1YMR180C YGR219WP53307 113 aa2.13□□□□□ -2.07
CTL1YMR180C CYT2Q00873 224 aa2.13□□□□□ -2.07
CTL1YMR180C GRX2P17695 143 aaKnown RBP2.12□□□□□ -2.07
CTL1YMR180C RPL24BP24000 155 aaKnown RBP2.12□□□□□ -2.07
CTL1YMR180C MSN4P33749 630 aa2.12□□□□□ -2.07
CTL1YMR180C YHR180WP38868 163 aa2.12□□□□□ -2.07
CTL1YMR180C YER085CP40058 173 aa2.12□□□□□ -2.07
CTL1YMR180C ARR2Q06597 130 aa2.12□□□□□ -2.07
CTL1YMR180C RPL9AP05738 191 aaKnown RBP2.11□□□□□ -2.07
CTL1YMR180C OAC1P32332 324 aa2.11□□□□□ -2.07
CTL1YMR180C YHR022CP38763 256 aa2.11□□□□□ -2.07
CTL1YMR180C RPF1P38805 295 aaKnown RBP2.11□□□□□ -2.07
CTL1YMR180C CAT5P41735 233 aa2.11□□□□□ -2.07
CTL1YMR180C RPL9BP51401 191 aaKnown RBP2.11□□□□□ -2.07
CTL1YMR180C NEJ1Q06148 342 aa2.11□□□□□ -2.07
CTL1YMR180C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
CTL1YMR180C PPA2P28239 310 aa2.1□□□□□ -2.07
CTL1YMR180C ECM33P38248 429 aaKnown RBP2.1□□□□□ -2.07
CTL1YMR180C RTR1P40084 226 aaPredicted RBP2.1□□□□□ -2.07
CTL1YMR180C COX15P40086 486 aa2.1□□□□□ -2.07
CTL1YMR180C BMT5P40493 336 aa2.1□□□□□ -2.07
CTL1YMR180C PGA2P53903 129 aa2.1□□□□□ -2.07
CTL1YMR180C HEM25Q07534 307 aa2.1□□□□□ -2.07
CTL1YMR180C MSW1P04803 379 aa2.09□□□□□ -2.07
CTL1YMR180C DDI2P0CH63 225 aa2.09□□□□□ -2.07
CTL1YMR180C DDI3P0CH64 225 aa2.09□□□□□ -2.07
CTL1YMR180C SSO1P32867 290 aa2.09□□□□□ -2.07
CTL1YMR180C YAR068WP39564 161 aa2.09□□□□□ -2.07
CTL1YMR180C YMR144WP40214 342 aaKnown RBP2.09□□□□□ -2.07
CTL1YMR180C YJR056CP47115 236 aa2.09□□□□□ -2.07
CTL1YMR180C NCB2Q92317 146 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms