RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C VMA11P32842 164 aa0.84□□□□□ -2.27
RFX1YLR176C DOG1P38774 246 aa0.84□□□□□ -2.27
RFX1YLR176C BFR1P38934 470 aaKnown RBP RIP-Chip data0.84□□□□□ -2.27not detected
RFX1YLR176C INM2Q05533 292 aa0.84□□□□□ -2.27
RFX1YLR176C MSH5Q12175 901 aa0.84□□□□□ -2.27
RFX1YLR176C YCT1Q12235 531 aa0.84□□□□□ -2.27
RFX1YLR176C SNU23Q12368 194 aaPredicted RBP0.84□□□□□ -2.27
RFX1YLR176C TCP1P12612 559 aaKnown RBP0.84□□□□□ -2.28
RFX1YLR176C RPT5P33297 434 aaKnown RBP0.84□□□□□ -2.28
RFX1YLR176C YHR127WP38833 243 aaKnown RBP0.84□□□□□ -2.28
RFX1YLR176C PEP8P40335 379 aa0.84□□□□□ -2.28
RFX1YLR176C FIS1P40515 155 aa0.84□□□□□ -2.28
RFX1YLR176C CIS3P47001 227 aa0.84□□□□□ -2.28
RFX1YLR176C YNL046WP53956 172 aa0.84□□□□□ -2.28
RFX1YLR176C CSM4Q08955 156 aa0.84□□□□□ -2.28
RFX1YLR176C YPL257WQ08974 193 aa0.84□□□□□ -2.28
RFX1YLR176C IPP1P00817 287 aaKnown RBP0.83□□□□□ -2.28
RFX1YLR176C MDH3P32419 343 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
RFX1YLR176C JHD2P47156 728 aaPredicted RBP0.83□□□□□ -2.28
RFX1YLR176C RRT8Q08219 342 aa0.83□□□□□ -2.28
RFX1YLR176C SIR4P11978 1358 aa0.83□□□□□ -2.28
RFX1YLR176C RPL9AP05738 191 aaKnown RBP0.83□□□□□ -2.28
RFX1YLR176C YUH1P35127 236 aa0.83□□□□□ -2.28
RFX1YLR176C YPT52P36018 234 aaKnown RBP0.83□□□□□ -2.28
RFX1YLR176C PHO88P38264 188 aaPredicted RBP0.83□□□□□ -2.28
RFX1YLR176C BNA6P43619 295 aa0.83□□□□□ -2.28
RFX1YLR176C YJR079WP47126 109 aa0.83□□□□□ -2.28
RFX1YLR176C RPL9BP51401 191 aaKnown RBP0.83□□□□□ -2.28
RFX1YLR176C RMR1P53060 241 aa0.83□□□□□ -2.28
RFX1YLR176C YGR219WP53307 113 aa0.83□□□□□ -2.28
RFX1YLR176C CYT2Q00873 224 aa0.83□□□□□ -2.28
RFX1YLR176C ATG39Q06159 398 aa0.83□□□□□ -2.28
RFX1YLR176C MSA1Q08471 629 aa0.83□□□□□ -2.28
RFX1YLR176C HTL1Q9URQ5 78 aa0.83□□□□□ -2.28
RFX1YLR176C CDC7P06243 507 aa0.82□□□□□ -2.28
RFX1YLR176C BMT5P40493 336 aa0.82□□□□□ -2.28
RFX1YLR176C YNL134CP53912 376 aaKnown RBP0.82□□□□□ -2.28
RFX1YLR176C SEI1Q06058 285 aa0.82□□□□□ -2.28
RFX1YLR176C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.82□□□□□ -2.28not detected
RFX1YLR176C MSW1P04803 379 aa0.81□□□□□ -2.28
RFX1YLR176C SNA3P14359 133 aa0.81□□□□□ -2.28
RFX1YLR176C RPS5P26783 225 aaKnown RBP0.81□□□□□ -2.28
RFX1YLR176C OAC1P32332 324 aa0.81□□□□□ -2.28
RFX1YLR176C YHR022CP38763 256 aa0.81□□□□□ -2.28
RFX1YLR176C YAR068WP39564 161 aa0.81□□□□□ -2.28
RFX1YLR176C NIP7Q08962 181 aaKnown RBP0.81□□□□□ -2.28
RFX1YLR176C YLR126CQ12288 251 aa0.81□□□□□ -2.28
RFX1YLR176C YPL229WQ99395 206 aa0.81□□□□□ -2.28
RFX1YLR176C FCY2P17064 533 aa0.81□□□□□ -2.28
RFX1YLR176C GRX2P17695 143 aaKnown RBP0.81□□□□□ -2.28
RFX1YLR176C ERD2P18414 219 aa0.81□□□□□ -2.28
RFX1YLR176C ERV15P38312 142 aa0.81□□□□□ -2.28
RFX1YLR176C YHR180WP38868 163 aa0.81□□□□□ -2.28
RFX1YLR176C YMR144WP40214 342 aaKnown RBP0.81□□□□□ -2.28
RFX1YLR176C YIL001WP40560 513 aa0.81□□□□□ -2.28
RFX1YLR176C CAT5P41735 233 aa0.81□□□□□ -2.28
RFX1YLR176C PRM10P42946 383 aa0.81□□□□□ -2.28
RFX1YLR176C RPA43P46669 326 aa0.81□□□□□ -2.28
RFX1YLR176C HOC1P47124 396 aa0.81□□□□□ -2.28
RFX1YLR176C ERG25P53045 309 aa0.81□□□□□ -2.28
RFX1YLR176C NEJ1Q06148 342 aa0.81□□□□□ -2.28
RFX1YLR176C YLR173WQ06247 608 aa0.81□□□□□ -2.28
RFX1YLR176C INO80P53115 1489 aa0.81□□□□□ -2.28
RFX1YLR176C YKL075CP36083 450 aa0.8□□□□□ -2.28
RFX1YLR176C RPF1P38805 295 aaKnown RBP0.8□□□□□ -2.28
RFX1YLR176C VTC1P40046 129 aaRIP-Chip data0.8□□□□□ -2.28not detected
RFX1YLR176C YJR056CP47115 236 aa0.8□□□□□ -2.28
RFX1YLR176C ARR2Q06597 130 aa0.8□□□□□ -2.28
RFX1YLR176C HEM25Q07534 307 aa0.8□□□□□ -2.28
RFX1YLR176C PAM18Q07914 168 aa0.8□□□□□ -2.28
RFX1YLR176C ATG31Q12421 196 aa0.8□□□□□ -2.28
RFX1YLR176C YOR020W-AQ3E824 90 aa0.8□□□□□ -2.28
RFX1YLR176C YKE4P40544 346 aa0.8□□□□□ -2.28
RFX1YLR176C HAM1P47119 197 aaKnown RBP0.8□□□□□ -2.28
RFX1YLR176C MRPL50P53724 139 aa0.8□□□□□ -2.28
RFX1YLR176C LAP3Q01532 483 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
RFX1YLR176C YHR139C-AO13536 103 aa0.79□□□□□ -2.28
RFX1YLR176C DDI2P0CH63 225 aa0.79□□□□□ -2.28
RFX1YLR176C DDI3P0CH64 225 aa0.79□□□□□ -2.28
RFX1YLR176C MDH2P22133 377 aa0.79□□□□□ -2.28
RFX1YLR176C ECM33P38248 429 aaKnown RBP0.79□□□□□ -2.28
RFX1YLR176C DSE2P38844 325 aa0.79□□□□□ -2.28
RFX1YLR176C ILM1P47155 203 aa0.79□□□□□ -2.28
RFX1YLR176C USB1Q12208 290 aaKnown RBP0.79□□□□□ -2.28
RFX1YLR176C DCN1Q12395 269 aa0.79□□□□□ -2.28
RFX1YLR176C YOL162WP0CF19 215 aa0.79□□□□□ -2.28
RFX1YLR176C RIB1P38066 345 aa0.79□□□□□ -2.28
RFX1YLR176C YKR045CP36138 183 aa0.78□□□□□ -2.28
RFX1YLR176C YBR063CP38083 404 aa0.78□□□□□ -2.28
RFX1YLR176C YBR219CP38317 127 aa0.78□□□□□ -2.28
RFX1YLR176C YER135CP40082 130 aa0.78□□□□□ -2.28
RFX1YLR176C AGE2P40529 298 aa0.78□□□□□ -2.28
RFX1YLR176C YML096WQ04489 525 aa0.78□□□□□ -2.28
RFX1YLR176C SSQ1Q05931 657 aaPredicted RBP0.78□□□□□ -2.28
RFX1YLR176C LDB7P38210 180 aa0.78□□□□□ -2.28
RFX1YLR176C YNR062CP53748 327 aa0.78□□□□□ -2.28
RFX1YLR176C KRE28Q04431 385 aa0.78□□□□□ -2.28
RFX1YLR176C MED4Q12343 284 aa0.78□□□□□ -2.28
RFX1YLR176C CDC8P00572 216 aa0.77□□□□□ -2.29
RFX1YLR176C PET9P18239 318 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 87.3 ms