RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C DOA4P32571 926 aa1.36□□□□□ -2.19
CMS1YLR003C LDB7P38210 180 aa1.36□□□□□ -2.19
CMS1YLR003C YAR068WP39564 161 aa1.36□□□□□ -2.19
CMS1YLR003C YEL075CP39972 122 aa1.36□□□□□ -2.19
CMS1YLR003C FIS1P40515 155 aa1.36□□□□□ -2.19
CMS1YLR003C YGR026WP53217 278 aa1.36□□□□□ -2.19
CMS1YLR003C PRM15Q03262 622 aa1.36□□□□□ -2.19
CMS1YLR003C YOR186WQ08560 144 aa1.36□□□□□ -2.19
CMS1YLR003C ATO3Q12359 275 aa1.36□□□□□ -2.19
CMS1YLR003C Q0255P03881 472 aa1.35□□□□□ -2.19
CMS1YLR003C FAR8Q05040 523 aa1.35□□□□□ -2.19
CMS1YLR003C INM2Q05533 292 aa1.35□□□□□ -2.19
CMS1YLR003C ATG39Q06159 398 aa1.35□□□□□ -2.19
CMS1YLR003C AKR2Q12013 749 aa1.35□□□□□ -2.19
CMS1YLR003C ATG31Q12421 196 aa1.35□□□□□ -2.19
CMS1YLR003C HTL1Q9URQ5 78 aa1.35□□□□□ -2.19
CMS1YLR003C DRS2P39524 1355 aa1.34□□□□□ -2.19
CMS1YLR003C FCY2P17064 533 aa1.34□□□□□ -2.19
CMS1YLR003C CCA1P21269 546 aa1.34□□□□□ -2.19
CMS1YLR003C MRPL25P23369 157 aa1.34□□□□□ -2.19
CMS1YLR003C THO1P40040 218 aaKnown RBP1.34□□□□□ -2.19
CMS1YLR003C FMC1P40491 155 aa1.34□□□□□ -2.19
CMS1YLR003C YIL001WP40560 513 aa1.34□□□□□ -2.19
CMS1YLR003C CIS3P47001 227 aa1.34□□□□□ -2.19
CMS1YLR003C HOC1P47124 396 aa1.34□□□□□ -2.19
CMS1YLR003C RMR1P53060 241 aa1.34□□□□□ -2.19
CMS1YLR003C GTR2P53290 341 aa1.34□□□□□ -2.19
CMS1YLR003C YNL046WP53956 172 aa1.34□□□□□ -2.19
CMS1YLR003C YMR279CQ03263 540 aa1.34□□□□□ -2.19
CMS1YLR003C SSQ1Q05931 657 aaPredicted RBP1.34□□□□□ -2.19
CMS1YLR003C SEI1Q06058 285 aa1.34□□□□□ -2.19
CMS1YLR003C YPR172WQ06608 200 aa1.34□□□□□ -2.19
CMS1YLR003C MSA1Q08471 629 aa1.34□□□□□ -2.19
CMS1YLR003C RPL9AP05738 191 aaKnown RBP1.33□□□□□ -2.2
CMS1YLR003C MATALPHA1P0CY06 175 aa1.33□□□□□ -2.2
CMS1YLR003C HMLALPHA1P0CY07 175 aa1.33□□□□□ -2.2
CMS1YLR003C YPT52P36018 234 aaKnown RBP1.33□□□□□ -2.2
CMS1YLR003C CUE1P38428 203 aa1.33□□□□□ -2.2
CMS1YLR003C LSM4P40070 187 aaKnown RBP1.33□□□□□ -2.2
CMS1YLR003C CAT5P41735 233 aa1.33□□□□□ -2.2
CMS1YLR003C YFR054CP43622 192 aa1.33□□□□□ -2.2
CMS1YLR003C LIA1P47120 325 aaKnown RBP1.33□□□□□ -2.2
CMS1YLR003C ILM1P47155 203 aa1.33□□□□□ -2.2
CMS1YLR003C BAT2P47176 376 aaKnown RBP1.33□□□□□ -2.2
CMS1YLR003C RPL9BP51401 191 aaKnown RBP1.33□□□□□ -2.2
CMS1YLR003C NSA1P53136 463 aaPredicted RBP1.33□□□□□ -2.2
CMS1YLR003C SIR4P11978 1358 aa1.33□□□□□ -2.2
CMS1YLR003C COX5AP00424 153 aa1.32□□□□□ -2.2
CMS1YLR003C RIB1P38066 345 aa1.32□□□□□ -2.2
CMS1YLR003C SMD3P43321 101 aaKnown RBP1.32□□□□□ -2.2
CMS1YLR003C TRM9P49957 279 aa1.32□□□□□ -2.2
CMS1YLR003C SRL4Q03085 281 aa1.32□□□□□ -2.2
CMS1YLR003C KRE28Q04431 385 aa1.32□□□□□ -2.2
CMS1YLR003C YOR020W-AQ3E824 90 aa1.32□□□□□ -2.2
CMS1YLR003C MSW1P04803 379 aa1.31□□□□□ -2.2
CMS1YLR003C YPR170W-BP0C5R9 85 aa1.31□□□□□ -2.2
CMS1YLR003C FBA1P14540 359 aaKnown RBP1.31□□□□□ -2.2
CMS1YLR003C CDC10P25342 322 aaKnown RBP1.31□□□□□ -2.2
CMS1YLR003C PEX4P29340 183 aa1.31□□□□□ -2.2
CMS1YLR003C HAM1P47119 197 aaKnown RBP1.31□□□□□ -2.2
CMS1YLR003C MRPS8Q03799 155 aa1.31□□□□□ -2.2
CMS1YLR003C YML096WQ04489 525 aa1.31□□□□□ -2.2
CMS1YLR003C DCR2Q05924 578 aa1.31□□□□□ -2.2
CMS1YLR003C NIP7Q08962 181 aaKnown RBP1.31□□□□□ -2.2
CMS1YLR003C FCY21P40039 528 aa1.3□□□□□ -2.2
CMS1YLR003C COX15P40086 486 aa1.3□□□□□ -2.2
CMS1YLR003C YGR219WP53307 113 aa1.3□□□□□ -2.2
CMS1YLR003C YMD8Q03697 442 aa1.3□□□□□ -2.2
CMS1YLR003C YIL177CP40434 1758 aa1.29□□□□□ -2.2
CMS1YLR003C YJL225CP40889 1758 aa1.29□□□□□ -2.2
CMS1YLR003C RHO1P06780 209 aaKnown RBP1.29□□□□□ -2.2
CMS1YLR003C SNA3P14359 133 aa1.29□□□□□ -2.2
CMS1YLR003C ERD2P18414 219 aa1.29□□□□□ -2.2
CMS1YLR003C RPS5P26783 225 aaKnown RBP1.29□□□□□ -2.2
CMS1YLR003C MDH3P32419 343 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CMS1YLR003C MIC12P38341 106 aa1.29□□□□□ -2.2
CMS1YLR003C CTR2P38865 189 aa1.29□□□□□ -2.2
CMS1YLR003C VTC1P40046 129 aaRIP-Chip data1.29□□□□□ -2.2not detected
CMS1YLR003C PRM10P42946 383 aa1.29□□□□□ -2.2
CMS1YLR003C NUP84P52891 726 aa1.29□□□□□ -2.2
CMS1YLR003C ERV29P53337 310 aa1.29□□□□□ -2.2
CMS1YLR003C HEM25Q07534 307 aa1.29□□□□□ -2.2
CMS1YLR003C RAS2P01120 322 aaKnown RBP1.28□□□□□ -2.2
CMS1YLR003C YKL075CP36083 450 aa1.28□□□□□ -2.2
CMS1YLR003C YBR063CP38083 404 aa1.28□□□□□ -2.2
CMS1YLR003C RPF1P38805 295 aaKnown RBP1.28□□□□□ -2.2
CMS1YLR003C YJR056CP47115 236 aa1.28□□□□□ -2.2
CMS1YLR003C ERG25P53045 309 aa1.28□□□□□ -2.2
CMS1YLR003C NOP13P53883 403 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
CMS1YLR003C CYT2Q00873 224 aa1.28□□□□□ -2.2
CMS1YLR003C BOL1Q3E793 110 aa1.28□□□□□ -2.2
CMS1YLR003C SCL1P21243 252 aaKnown RBP1.27□□□□□ -2.21
CMS1YLR003C PPA2P28239 310 aa1.27□□□□□ -2.21
CMS1YLR003C OAC1P32332 324 aa1.27□□□□□ -2.21
CMS1YLR003C BMH2P34730 273 aaKnown RBP1.27□□□□□ -2.21
CMS1YLR003C VPS21P36017 210 aaKnown RBP1.27□□□□□ -2.21
CMS1YLR003C ECM33P38248 429 aaKnown RBP1.27□□□□□ -2.21
CMS1YLR003C PHO88P38264 188 aaPredicted RBP1.27□□□□□ -2.21
CMS1YLR003C ERV15P38312 142 aa1.27□□□□□ -2.21
CMS1YLR003C PEX17P40155 199 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms