RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeastyeast

Gene APA1, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APA1YCL050C YHR125WP38831 101 aa1.93□□□□□ -2.1
APA1YCL050C YEL075CP39972 122 aa1.93□□□□□ -2.1
APA1YCL050C GIM3P53900 129 aa1.93□□□□□ -2.1
APA1YCL050C YMR279CQ03263 540 aa1.93□□□□□ -2.1
APA1YCL050C RRP40Q08285 240 aaKnown RBP1.93□□□□□ -2.1
APA1YCL050C SYC1Q08553 188 aaPredicted RBP1.93□□□□□ -2.1
APA1YCL050C BNI1P41832 1953 aa1.92□□□□□ -2.1
APA1YCL050C TY1B-DR4Q07793 1604 aa1.92□□□□□ -2.1
APA1YCL050C FBA1P14540 359 aaKnown RBP1.92□□□□□ -2.1
APA1YCL050C SRB4P32569 687 aa1.92□□□□□ -2.1
APA1YCL050C SGE1P33335 543 aa1.92□□□□□ -2.1
APA1YCL050C MRPL39P36533 70 aa1.92□□□□□ -2.1
APA1YCL050C EFM5P53200 248 aaKnown RBP1.92□□□□□ -2.1
APA1YCL050C MPP6P53725 186 aaPredicted RBP1.92□□□□□ -2.1
APA1YCL050C SSQ1Q05931 657 aaPredicted RBP1.92□□□□□ -2.1
APA1YCL050C YPR098CQ06089 161 aa1.92□□□□□ -2.1
APA1YCL050C ATO3Q12359 275 aa1.92□□□□□ -2.1
APA1YCL050C CFT1Q06632 1357 aaKnown RBP1.92□□□□□ -2.1
APA1YCL050C IRC20Q06554 1556 aa1.91□□□□□ -2.1
APA1YCL050C APA2P22108 325 aa1.91□□□□□ -2.1
APA1YCL050C VMA11P32842 164 aa1.91□□□□□ -2.1
APA1YCL050C MSA2P36157 363 aa1.91□□□□□ -2.1
APA1YCL050C MAK5P38112 773 aaPredicted RBP1.91□□□□□ -2.1
APA1YCL050C FZO1P38297 855 aa1.91□□□□□ -2.1
APA1YCL050C SMB1P40018 196 aaKnown RBP1.91□□□□□ -2.1
APA1YCL050C PEP8P40335 379 aa1.91□□□□□ -2.1
APA1YCL050C LIA1P47120 325 aaKnown RBP1.91□□□□□ -2.1
APA1YCL050C FAR8Q05040 523 aa1.91□□□□□ -2.1
APA1YCL050C AKR2Q12013 749 aa1.91□□□□□ -2.1
APA1YCL050C BTS1Q12051 335 aa1.91□□□□□ -2.1
APA1YCL050C MDS3P53094 1487 aa1.9□□□□□ -2.11
APA1YCL050C CDC36P06100 191 aaPredicted RBP1.9□□□□□ -2.11
APA1YCL050C POL30P15873 258 aaKnown RBP1.9□□□□□ -2.11
APA1YCL050C PEX4P29340 183 aa1.9□□□□□ -2.11
APA1YCL050C SIP3P38717 1229 aa1.9□□□□□ -2.11
APA1YCL050C SMD3P43321 101 aaKnown RBP1.9□□□□□ -2.11
APA1YCL050C YAR1P46683 200 aa1.9□□□□□ -2.11
APA1YCL050C YNL134CP53912 376 aaKnown RBP1.9□□□□□ -2.11
APA1YCL050C COQ10Q08058 207 aa1.9□□□□□ -2.11
APA1YCL050C BRX1Q08235 291 aaKnown RBP1.9□□□□□ -2.11
APA1YCL050C LTE1P07866 1435 aa1.9□□□□□ -2.11
APA1YCL050C MYO2P19524 1574 aaKnown RBP1.89□□□□□ -2.11
APA1YCL050C KSS1P14681 368 aa1.89□□□□□ -2.11
APA1YCL050C ERG24P32462 438 aaKnown RBP1.89□□□□□ -2.11
APA1YCL050C RTR1P40084 226 aaPredicted RBP1.89□□□□□ -2.11
APA1YCL050C RMR1P53060 241 aa1.89□□□□□ -2.11
APA1YCL050C YGL159WP53110 370 aa1.89□□□□□ -2.11
APA1YCL050C SNZ2P53824 298 aa1.89□□□□□ -2.11
APA1YCL050C SPG4Q04438 115 aa1.89□□□□□ -2.11
APA1YCL050C RRS1Q08746 203 aaKnown RBP1.89□□□□□ -2.11
APA1YCL050C YOL107WQ12239 342 aa1.89□□□□□ -2.11
APA1YCL050C TCB3Q03640 1545 aaKnown RBP1.88□□□□□ -2.11
APA1YCL050C YPK2P18961 677 aa1.88□□□□□ -2.11
APA1YCL050C SCL1P21243 252 aaKnown RBP1.88□□□□□ -2.11
APA1YCL050C RNA15P25299 296 aaPredicted RBP1.88□□□□□ -2.11
APA1YCL050C HOM6P31116 359 aaKnown RBP1.88□□□□□ -2.11
APA1YCL050C MSS2P40990 351 aa1.88□□□□□ -2.11
APA1YCL050C CIS3P47001 227 aa1.88□□□□□ -2.11
APA1YCL050C USE1P53146 245 aa1.88□□□□□ -2.11
APA1YCL050C MRPS17Q03246 237 aaPredicted RBP1.88□□□□□ -2.11
APA1YCL050C MRPS8Q03799 155 aa1.88□□□□□ -2.11
APA1YCL050C YLR030WQ07967 263 aa1.88□□□□□ -2.11
APA1YCL050C GRE1Q08969 168 aa1.88□□□□□ -2.11
APA1YCL050C RAS2P01120 322 aaKnown RBP1.87□□□□□ -2.11
APA1YCL050C BPT1P14772 1559 aa1.87□□□□□ -2.11
APA1YCL050C PEP1P32319 1579 aa1.87□□□□□ -2.11
APA1YCL050C MDH3P32419 343 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
APA1YCL050C MRX3P38172 270 aa1.87□□□□□ -2.11
APA1YCL050C GOS1P38736 223 aa1.87□□□□□ -2.11
APA1YCL050C DOG1P38774 246 aa1.87□□□□□ -2.11
APA1YCL050C THO1P40040 218 aaKnown RBP1.87□□□□□ -2.11
APA1YCL050C ERG25P53045 309 aa1.87□□□□□ -2.11
APA1YCL050C CGR1P53188 120 aa1.87□□□□□ -2.11
APA1YCL050C PET117Q02771 107 aa1.87□□□□□ -2.11
APA1YCL050C YOR186WQ08560 144 aa1.87□□□□□ -2.11
APA1YCL050C MMS1Q06211 1407 aa1.86□□□□□ -2.11
APA1YCL050C COX5AP00424 153 aa1.86□□□□□ -2.11
APA1YCL050C RPL9AP05738 191 aaKnown RBP1.86□□□□□ -2.11
APA1YCL050C EHD3P28817 500 aa1.86□□□□□ -2.11
APA1YCL050C TCD1P38756 429 aa1.86□□□□□ -2.11
APA1YCL050C VTC1P40046 129 aaRIP-Chip data1.86□□□□□ -2.11not detected
APA1YCL050C FIS1P40515 155 aa1.86□□□□□ -2.11
APA1YCL050C YRB2P40517 327 aa1.86□□□□□ -2.11
APA1YCL050C GCN20P43535 752 aaKnown RBP1.86□□□□□ -2.11
APA1YCL050C RPL9BP51401 191 aaKnown RBP1.86□□□□□ -2.11
APA1YCL050C GTR2P53290 341 aa1.86□□□□□ -2.11
APA1YCL050C YGR219WP53307 113 aa1.86□□□□□ -2.11
APA1YCL050C PGA2P53903 129 aa1.86□□□□□ -2.11
APA1YCL050C RHO3Q00245 231 aaKnown RBP1.86□□□□□ -2.11
APA1YCL050C RRP17Q04031 235 aaPredicted RBP1.86□□□□□ -2.11
APA1YCL050C INM2Q05533 292 aa1.86□□□□□ -2.11
APA1YCL050C FUS2Q05670 677 aa1.86□□□□□ -2.11
APA1YCL050C YLR173WQ06247 608 aa1.86□□□□□ -2.11
APA1YCL050C YPL257WQ08974 193 aa1.86□□□□□ -2.11
APA1YCL050C SNU23Q12368 194 aaPredicted RBP1.86□□□□□ -2.11
APA1YCL050C CMC2Q3E7A4 109 aa1.86□□□□□ -2.11
APA1YCL050C BUD4P47136 1447 aa1.85□□□□□ -2.11
APA1YCL050C JIP3O13555 125 aa1.85□□□□□ -2.11
APA1YCL050C IPP1P00817 287 aaKnown RBP1.85□□□□□ -2.11
APA1YCL050C DSF1P0CX08 502 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms