RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W MRX4Q12467 430 aa1.25□□□□□ -2.21
SNF5YBR289W NUP157P40064 1391 aaKnown RBP1.25□□□□□ -2.21
SNF5YBR289W SCC2Q04002 1493 aa1.25□□□□□ -2.21
SNF5YBR289W YEL009C-AA0A023PZF2 135 aa1.25□□□□□ -2.21
SNF5YBR289W SFC1P33303 322 aa1.25□□□□□ -2.21
SNF5YBR289W TAF14P35189 244 aa1.25□□□□□ -2.21
SNF5YBR289W BFR1P38934 470 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
SNF5YBR289W TIF34P40217 347 aaKnown RBP1.25□□□□□ -2.21
SNF5YBR289W OTU1P43558 301 aa1.25□□□□□ -2.21
SNF5YBR289W COS6P53344 381 aa1.25□□□□□ -2.21
SNF5YBR289W SYC1Q08553 188 aaPredicted RBP1.25□□□□□ -2.21
SNF5YBR289W ISD11Q6Q560 94 aa1.25□□□□□ -2.21
SNF5YBR289W PDR10P51533 1564 aa1.25□□□□□ -2.21
SNF5YBR289W SIR4P11978 1358 aa1.25□□□□□ -2.21
SNF5YBR289W GRX2P17695 143 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W VPS3P23643 1011 aa1.24□□□□□ -2.21
SNF5YBR289W DRE2P36152 348 aa1.24□□□□□ -2.21
SNF5YBR289W IRC22P40006 225 aa1.24□□□□□ -2.21
SNF5YBR289W RTR1P40084 226 aaPredicted RBP1.24□□□□□ -2.21
SNF5YBR289W PEX17P40155 199 aa1.24□□□□□ -2.21
SNF5YBR289W MSS2P40990 351 aa1.24□□□□□ -2.21
SNF5YBR289W LIA1P47120 325 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W PET191Q02772 108 aa1.24□□□□□ -2.21
SNF5YBR289W CWC21Q03375 135 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W YLR179CQ06252 201 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W YCL012CQ8J0M4 134 aa1.24□□□□□ -2.21
SNF5YBR289W NUP170P38181 1502 aa1.24□□□□□ -2.21
SNF5YBR289W DOP1Q03921 1698 aa1.24□□□□□ -2.21
SNF5YBR289W MRP1P10662 321 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W USE1P53146 245 aa1.24□□□□□ -2.21
SNF5YBR289W YPR098CQ06089 161 aa1.24□□□□□ -2.21
SNF5YBR289W RUD3Q12234 484 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W FKS1P38631 1876 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W Q0255P03881 472 aa1.24□□□□□ -2.21
SNF5YBR289W NTG1P31378 399 aa1.24□□□□□ -2.21
SNF5YBR289W DAN1P47178 298 aa1.24□□□□□ -2.21
SNF5YBR289W TRM9P49957 279 aa1.24□□□□□ -2.21
SNF5YBR289W CGI121Q03705 181 aaKnown RBP1.24□□□□□ -2.21
SNF5YBR289W PEX12Q04370 399 aa1.24□□□□□ -2.21
SNF5YBR289W KRE28Q04431 385 aa1.24□□□□□ -2.21
SNF5YBR289W UFD4P33202 1483 aa1.23□□□□□ -2.21
SNF5YBR289W SPT3P06844 337 aa1.23□□□□□ -2.21
SNF5YBR289W MIX17Q03667 156 aa1.23□□□□□ -2.21
SNF5YBR289W NIP7Q08962 181 aaKnown RBP1.23□□□□□ -2.21
SNF5YBR289W YBL008W-AQ3E821 79 aa1.23□□□□□ -2.21
SNF5YBR289W YLR462WO13556 202 aa1.23□□□□□ -2.21
SNF5YBR289W RNA15P25299 296 aaPredicted RBP1.23□□□□□ -2.21
SNF5YBR289W YKT6P36015 200 aaKnown RBP1.23□□□□□ -2.21
SNF5YBR289W RIB1P38066 345 aa1.23□□□□□ -2.21
SNF5YBR289W YEL075CP39972 122 aa1.23□□□□□ -2.21
SNF5YBR289W YER189WP40104 122 aa1.23□□□□□ -2.21
SNF5YBR289W FMC1P40491 155 aa1.23□□□□□ -2.21
SNF5YBR289W PRM10P42946 383 aa1.23□□□□□ -2.21
SNF5YBR289W ASI3P53983 676 aa1.23□□□□□ -2.21
SNF5YBR289W GRH1Q04410 372 aaKnown RBP1.23□□□□□ -2.21
SNF5YBR289W BTS1Q12051 335 aa1.23□□□□□ -2.21
SNF5YBR289W DNF3Q12674 1656 aa1.23□□□□□ -2.21
SNF5YBR289W NUP159P40477 1460 aa1.22□□□□□ -2.21
SNF5YBR289W CCA1P21269 546 aa1.22□□□□□ -2.21
SNF5YBR289W MAL32P38158 584 aa1.22□□□□□ -2.21
SNF5YBR289W DOG1P38774 246 aa1.22□□□□□ -2.21
SNF5YBR289W YJL016WP47072 561 aa1.22□□□□□ -2.21
SNF5YBR289W MCM22P47167 239 aa1.22□□□□□ -2.21
SNF5YBR289W ALG13P53178 202 aa1.22□□□□□ -2.21
SNF5YBR289W MAL12P53341 584 aa1.22□□□□□ -2.21
SNF5YBR289W ARR2Q06597 130 aa1.22□□□□□ -2.21
SNF5YBR289W RDS3Q06835 107 aaPredicted RBP1.22□□□□□ -2.21
SNF5YBR289W YLR126CQ12288 251 aa1.22□□□□□ -2.21
SNF5YBR289W MED4Q12343 284 aa1.22□□□□□ -2.21
SNF5YBR289W GIS3Q12418 502 aa1.22□□□□□ -2.21
SNF5YBR289W YKL183C-AQ3E765 70 aa1.22□□□□□ -2.21
SNF5YBR289W SAC3P46674 1301 aa1.22□□□□□ -2.21
SNF5YBR289W CYR1P08678 2026 aaKnown RBP1.22□□□□□ -2.21
SNF5YBR289W TOP2P06786 1428 aaKnown RBP1.22□□□□□ -2.21
SNF5YBR289W YDR157WA0A023PZE8 133 aa1.22□□□□□ -2.21
SNF5YBR289W BMH1P29311 267 aaKnown RBP1.22□□□□□ -2.21
SNF5YBR289W ECM33P38248 429 aaKnown RBP1.22□□□□□ -2.21
SNF5YBR289W RPF1P38805 295 aaKnown RBP1.22□□□□□ -2.21
SNF5YBR289W YHB1P39676 399 aaKnown RBP1.22□□□□□ -2.21
SNF5YBR289W TRM12Q04235 462 aa1.22□□□□□ -2.21
SNF5YBR289W ADF1Q2V2Q1 113 aa1.22□□□□□ -2.21
SNF5YBR289W HAP1P0CE41 1502 aa1.21□□□□□ -2.22
SNF5YBR289W GDB1Q06625 1536 aa1.21□□□□□ -2.22
SNF5YBR289W THP2O13539 261 aaKnown RBP1.21□□□□□ -2.22
SNF5YBR289W RPB4P20433 221 aaPredicted RBP1.21□□□□□ -2.22
SNF5YBR289W CLB6P32943 380 aa1.21□□□□□ -2.22
SNF5YBR289W ERG28P40030 148 aa1.21□□□□□ -2.22
SNF5YBR289W MRPL49P40858 161 aaPredicted RBP1.21□□□□□ -2.22
SNF5YBR289W GCN20P43535 752 aaKnown RBP1.21□□□□□ -2.22
SNF5YBR289W SLX9P53251 210 aaPredicted RBP1.21□□□□□ -2.22
SNF5YBR289W YDR209CQ03480 137 aa1.21□□□□□ -2.22
SNF5YBR289W FAR8Q05040 523 aa1.21□□□□□ -2.22
SNF5YBR289W TPO4Q12256 659 aa1.21□□□□□ -2.22
SNF5YBR289W PDR5P33302 1511 aaKnown RBP1.21□□□□□ -2.22
SNF5YBR289W SPO14P36126 1683 aa1.21□□□□□ -2.22
SNF5YBR289W IPP1P00817 287 aaKnown RBP1.21□□□□□ -2.22
SNF5YBR289W BCY1P07278 416 aaKnown RBP1.21□□□□□ -2.22
SNF5YBR289W YHR032W-AP0C5N6 59 aa1.21□□□□□ -2.22
SNF5YBR289W SCM4P32564 187 aa1.21□□□□□ -2.22
SNF5YBR289W BMH2P34730 273 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms