RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C BUD8P41698 603 aa6.81□□□□□ -1.32
LSP1YPL004C BNA6P43619 295 aa6.81□□□□□ -1.32
LSP1YPL004C AVT4P50944 713 aa6.81□□□□□ -1.32
LSP1YPL004C DOC1P53068 250 aa6.81□□□□□ -1.32
LSP1YPL004C YKR005CQ02203 525 aa6.81□□□□□ -1.32
LSP1YPL004C GMC1Q04399 608 aa6.81□□□□□ -1.32
LSP1YPL004C FMP42Q04991 504 aa6.81□□□□□ -1.32
LSP1YPL004C MDM36Q06820 579 aa6.81□□□□□ -1.32
LSP1YPL004C ASR1Q06834 288 aa6.81□□□□□ -1.32
LSP1YPL004C HEM25Q07534 307 aa6.81□□□□□ -1.32
LSP1YPL004C MRPS28P21771 286 aa6.8□□□□□ -1.32
LSP1YPL004C GPX2P38143 162 aa6.8□□□□□ -1.32
LSP1YPL004C YHL044WP38727 235 aa6.8□□□□□ -1.32
LSP1YPL004C JLP2P40206 208 aa6.8□□□□□ -1.32
LSP1YPL004C GLR1P41921 483 aaKnown RBP6.8□□□□□ -1.32
LSP1YPL004C MRPL35Q06678 367 aa6.8□□□□□ -1.32
LSP1YPL004C SSK1Q07084 712 aa6.8□□□□□ -1.32
LSP1YPL004C SNA4Q07549 140 aa6.8□□□□□ -1.32
LSP1YPL004C YOR097CQ12274 175 aaPredicted RBP6.8□□□□□ -1.32
LSP1YPL004C CDC28P00546 298 aaKnown RBP6.79□□□□□ -1.32
LSP1YPL004C YND1P40009 630 aa6.79□□□□□ -1.32
LSP1YPL004C RTT105P40063 208 aa6.79□□□□□ -1.32
LSP1YPL004C YER121WP40076 114 aa6.79□□□□□ -1.32
LSP1YPL004C YIR020CP40575 100 aa6.79□□□□□ -1.32
LSP1YPL004C NCA3P46955 337 aa6.79□□□□□ -1.32
LSP1YPL004C NSA1P53136 463 aaPredicted RBP6.79□□□□□ -1.32
LSP1YPL004C SCW4P53334 386 aaKnown RBP6.79□□□□□ -1.32
LSP1YPL004C CPR8P53728 308 aa6.79□□□□□ -1.32
LSP1YPL004C TDA1Q03533 586 aa6.79□□□□□ -1.32
LSP1YPL004C MRX9Q07349 420 aaKnown RBP6.79□□□□□ -1.32
LSP1YPL004C TIR4Q12218 487 aaPredicted RBP6.79□□□□□ -1.32
LSP1YPL004C ERP4Q12450 207 aa6.79□□□□□ -1.32
LSP1YPL004C SPS4P09937 338 aa6.78□□□□□ -1.32
LSP1YPL004C TAL1P15019 335 aaKnown RBP6.78□□□□□ -1.32
LSP1YPL004C PET18P25362 215 aa6.78□□□□□ -1.32
LSP1YPL004C RPL5P26321 297 aaKnown RBP6.78□□□□□ -1.32
LSP1YPL004C CNE1P27825 502 aa6.78□□□□□ -1.32
LSP1YPL004C TMA19P35691 167 aaKnown RBP6.78□□□□□ -1.32
LSP1YPL004C UMP1P38293 148 aa6.78□□□□□ -1.32
LSP1YPL004C SMB1P40018 196 aaKnown RBP6.78□□□□□ -1.32
LSP1YPL004C YER079WP40052 210 aaKnown RBP6.78□□□□□ -1.32
LSP1YPL004C LSM4P40070 187 aaKnown RBP6.78□□□□□ -1.32
LSP1YPL004C YDR248CQ03786 193 aa6.78□□□□□ -1.32
LSP1YPL004C MGR3Q04472 501 aa6.78□□□□□ -1.32
LSP1YPL004C ATG41Q12048 136 aa6.78□□□□□ -1.32
LSP1YPL004C YLR108CQ12259 485 aa6.78□□□□□ -1.32
LSP1YPL004C RTR2Q12378 196 aa6.78□□□□□ -1.32
LSP1YPL004C GEP5Q12393 293 aa6.78□□□□□ -1.32
LSP1YPL004C TDH2P00358 332 aaKnown RBP6.77□□□□□ -1.33
LSP1YPL004C RPS18AP0CX55 146 aaKnown RBP6.77□□□□□ -1.33
LSP1YPL004C RPS18BP0CX56 146 aaPredicted RBP6.77□□□□□ -1.33
LSP1YPL004C APA2P22108 325 aa6.77□□□□□ -1.33
LSP1YPL004C MRPL36P36531 177 aa6.77□□□□□ -1.33
LSP1YPL004C SGN1P40561 250 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
LSP1YPL004C SYS1P41544 203 aa6.77□□□□□ -1.33
LSP1YPL004C TAF4P50105 388 aa6.77□□□□□ -1.33
LSP1YPL004C PIN3Q06449 215 aa6.77□□□□□ -1.33
LSP1YPL004C MSH5Q12175 901 aa6.77□□□□□ -1.33
LSP1YPL004C REP1P03871 373 aa6.76□□□□□ -1.33
LSP1YPL004C RPL39P04650 51 aa6.76□□□□□ -1.33
LSP1YPL004C FUR4P05316 633 aaKnown RBP6.76□□□□□ -1.33
LSP1YPL004C RMD6P39975 231 aa6.76□□□□□ -1.33
LSP1YPL004C ABM1P47146 123 aa6.76□□□□□ -1.33
LSP1YPL004C SSN8P47821 323 aa6.76□□□□□ -1.33
LSP1YPL004C SRL4Q03085 281 aa6.76□□□□□ -1.33
LSP1YPL004C YMR130WQ04223 302 aa6.76□□□□□ -1.33
LSP1YPL004C YMR254CQ04838 102 aa6.76□□□□□ -1.33
LSP1YPL004C MCM21Q06675 368 aa6.76□□□□□ -1.33
LSP1YPL004C DCP1Q12517 231 aaPredicted RBP6.76□□□□□ -1.33
LSP1YPL004C SUS1Q6WNK7 96 aa6.76□□□□□ -1.33
LSP1YPL004C ARO4P32449 370 aaKnown RBP6.75□□□□□ -1.33
LSP1YPL004C UTP11P34247 250 aaPredicted RBP6.75□□□□□ -1.33
LSP1YPL004C LNP1P38878 278 aa6.75□□□□□ -1.33
LSP1YPL004C ATG18P43601 500 aa6.75□□□□□ -1.33
LSP1YPL004C RPS0BP46654 252 aaKnown RBP6.75□□□□□ -1.33
LSP1YPL004C GON7P46984 123 aa6.75□□□□□ -1.33
LSP1YPL004C GEP7P53171 287 aa6.75□□□□□ -1.33
LSP1YPL004C YLR283WQ05867 314 aa6.75□□□□□ -1.33
LSP1YPL004C TPO3Q06451 622 aa6.75□□□□□ -1.33
LSP1YPL004C RDL1Q12305 139 aaKnown RBP6.75□□□□□ -1.33
LSP1YPL004C HUT1Q12520 339 aa6.75□□□□□ -1.33
LSP1YPL004C YBL113CQ7M4S9 792 aa6.75□□□□□ -1.33
LSP1YPL004C DPB2P24482 689 aaPredicted RBP6.74□□□□□ -1.33
LSP1YPL004C VMA3P25515 160 aa6.74□□□□□ -1.33
LSP1YPL004C HOM6P31116 359 aaKnown RBP6.74□□□□□ -1.33
LSP1YPL004C MBA1P38300 278 aa6.74□□□□□ -1.33
LSP1YPL004C OSH7P38755 437 aa6.74□□□□□ -1.33
LSP1YPL004C CTR2P38865 189 aa6.74□□□□□ -1.33
LSP1YPL004C MSS4P38994 779 aa6.74□□□□□ -1.33
LSP1YPL004C GPI14P47088 403 aaKnown RBP6.74□□□□□ -1.33
LSP1YPL004C SMM1P53720 384 aaKnown RBP6.74□□□□□ -1.33
LSP1YPL004C BUD25P85052 153 aa6.74□□□□□ -1.33
LSP1YPL004C CTF19Q02732 369 aa6.74□□□□□ -1.33
LSP1YPL004C GRC3Q07845 632 aa6.74□□□□□ -1.33
LSP1YPL004C FCY22Q12119 530 aa6.74□□□□□ -1.33
LSP1YPL004C FRE8Q12209 686 aa6.74□□□□□ -1.33
LSP1YPL004C IES3Q12345 250 aa6.74□□□□□ -1.33
LSP1YPL004C YCL048W-AQ2V2Q2 79 aa6.74□□□□□ -1.33
LSP1YPL004C RPL25P04456 142 aaKnown RBP6.73□□□□□ -1.33
LSP1YPL004C CHO1P08456 276 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 129.5 ms