RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W MDH3P32419 343 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CAF120YNL278W SPC34P36131 295 aa2.49□□□□□ -2.01
CAF120YNL278W UTP30P36144 274 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W ASC1P38011 319 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W MRPL16P38064 232 aa2.49□□□□□ -2.01
CAF120YNL278W YBR056WP38081 501 aa2.49□□□□□ -2.01
CAF120YNL278W TCM62P38228 572 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W HSP10P38910 106 aa2.49□□□□□ -2.01
CAF120YNL278W SWM2P40342 146 aa2.49□□□□□ -2.01
CAF120YNL278W CIN1P40987 1014 aa2.49□□□□□ -2.01
CAF120YNL278W PAU12P53343 120 aa2.49□□□□□ -2.01
CAF120YNL278W CPR8P53728 308 aa2.49□□□□□ -2.01
CAF120YNL278W TRM112P53738 135 aaPredicted RBP2.49□□□□□ -2.01
CAF120YNL278W DID2P69771 204 aa2.49□□□□□ -2.01
CAF120YNL278W ELP3Q02908 557 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W PIR1Q03178 341 aa2.49□□□□□ -2.01
CAF120YNL278W TDA1Q03533 586 aa2.49□□□□□ -2.01
CAF120YNL278W EMI1Q04406 187 aa2.49□□□□□ -2.01
CAF120YNL278W BUR2Q05949 395 aa2.49□□□□□ -2.01
CAF120YNL278W GPI11Q06636 219 aa2.49□□□□□ -2.01
CAF120YNL278W YOL159CQ08300 171 aa2.49□□□□□ -2.01
CAF120YNL278W RKM5Q12367 367 aa2.49□□□□□ -2.01
CAF120YNL278W DET1Q99288 334 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W SEC16P48415 2195 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W DFR1P07807 211 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CAF120YNL278W SPE1P08432 466 aa2.49□□□□□ -2.01
CAF120YNL278W MRP1P10662 321 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W RPL3P14126 387 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W SAR1P20606 190 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W RNA14P25298 677 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W OAC1P32332 324 aa2.49□□□□□ -2.01
CAF120YNL278W TAF14P35189 244 aa2.49□□□□□ -2.01
CAF120YNL278W TCD2P36101 447 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W IPI1P38803 334 aaPredicted RBP2.49□□□□□ -2.01
CAF120YNL278W IDP2P41939 412 aa2.49□□□□□ -2.01
CAF120YNL278W FAR3P46671 204 aa2.49□□□□□ -2.01
CAF120YNL278W YAR1P46683 200 aa2.49□□□□□ -2.01
CAF120YNL278W COS10P52924 374 aa2.49□□□□□ -2.01
CAF120YNL278W YGL039WP53183 348 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W YNR066CP53752 436 aa2.49□□□□□ -2.01
CAF120YNL278W YLR460CP54007 376 aa2.49□□□□□ -2.01
CAF120YNL278W LSM3P57743 89 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W ARG5,6Q01217 863 aa2.49□□□□□ -2.01
CAF120YNL278W PEX10Q05568 337 aa2.49□□□□□ -2.01
CAF120YNL278W COS7Q07788 383 aa2.49□□□□□ -2.01
CAF120YNL278W SKI7Q08491 747 aaPredicted RBP2.49□□□□□ -2.01
CAF120YNL278W RLM1Q12224 676 aa2.49□□□□□ -2.01
CAF120YNL278W YKL183C-AQ3E765 70 aa2.49□□□□□ -2.01
CAF120YNL278W YOR304C-AO14468 76 aa2.49□□□□□ -2.01
CAF120YNL278W COR1P07256 457 aa2.49□□□□□ -2.01
CAF120YNL278W RPS28BP0C0X0 67 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W SAM35P14693 329 aa2.49□□□□□ -2.01
CAF120YNL278W FPS1P23900 669 aa2.49□□□□□ -2.01
CAF120YNL278W RAD23P32628 398 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W CMC1P36064 111 aa2.49□□□□□ -2.01
CAF120YNL278W BIG1P38813 335 aa2.49□□□□□ -2.01
CAF120YNL278W YAL037WP39728 267 aa2.49□□□□□ -2.01
CAF120YNL278W SWP82P43554 623 aa2.49□□□□□ -2.01
CAF120YNL278W CTK2P46962 323 aa2.49□□□□□ -2.01
CAF120YNL278W SSY5P47002 699 aa2.49□□□□□ -2.01
CAF120YNL278W NAM8Q00539 523 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W YDR249CQ03787 373 aa2.49□□□□□ -2.01
CAF120YNL278W AIM36Q03798 255 aa2.49□□□□□ -2.01
CAF120YNL278W RRP45Q05636 305 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W FRE3Q08905 711 aa2.49□□□□□ -2.01
CAF120YNL278W LPX1Q12405 387 aaKnown RBP2.49□□□□□ -2.01
CAF120YNL278W RPS28AQ3E7X9 67 aaPredicted RBP2.49□□□□□ -2.01
CAF120YNL278W ACC1Q00955 2233 aaKnown RBP2.48□□□□□ -2.01
CAF120YNL278W YBR121C-AP0C5L4 52 aa2.48□□□□□ -2.01
CAF120YNL278W MGT1P26188 188 aa2.48□□□□□ -2.01
CAF120YNL278W UBC8P28263 218 aa2.48□□□□□ -2.01
CAF120YNL278W FPR2P32472 135 aa2.48□□□□□ -2.01
CAF120YNL278W PAD1P33751 242 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CAF120YNL278W PTC1P35182 281 aa2.48□□□□□ -2.01
CAF120YNL278W APL3P38065 1025 aa2.48□□□□□ -2.01
CAF120YNL278W YHR210CP38893 341 aa2.48□□□□□ -2.01
CAF120YNL278W SEC24P40482 926 aaKnown RBP2.48□□□□□ -2.01
CAF120YNL278W DPB11P47027 764 aaPredicted RBP2.48□□□□□ -2.01
CAF120YNL278W TPO3Q06451 622 aa2.48□□□□□ -2.01
CAF120YNL278W ZEO1Q08245 113 aa2.48□□□□□ -2.01
CAF120YNL278W ATG40Q99325 256 aa2.48□□□□□ -2.01
CAF120YNL278W PRP8P33334 2413 aaKnown RBP2.48□□□□□ -2.01
CAF120YNL278W RPS16AP0CX51 143 aaKnown RBP2.48□□□□□ -2.01
CAF120YNL278W RPS16BP0CX52 143 aaKnown RBP2.48□□□□□ -2.01
CAF120YNL278W GCN3P14741 305 aa2.48□□□□□ -2.01
CAF120YNL278W ATG22P25568 528 aa2.48□□□□□ -2.01
CAF120YNL278W ERG9P29704 444 aa2.48□□□□□ -2.01
CAF120YNL278W LDS1P31379 325 aa2.48□□□□□ -2.01
CAF120YNL278W AIM26P32858 118 aa2.48□□□□□ -2.01
CAF120YNL278W SDP1P40479 209 aa2.48□□□□□ -2.01
CAF120YNL278W PFA3P42836 336 aa2.48□□□□□ -2.01
CAF120YNL278W PTR3P43606 678 aa2.48□□□□□ -2.01
CAF120YNL278W MRH4P53166 561 aa2.48□□□□□ -2.01
CAF120YNL278W YOL131WQ08270 108 aa2.48□□□□□ -2.01
CAF120YNL278W SLF1Q12034 447 aaKnown RBP2.48□□□□□ -2.01
CAF120YNL278W COX2P00410 251 aa2.47□□□□□ -2.01
CAF120YNL278W STE7P06784 515 aa2.47□□□□□ -2.01
CAF120YNL278W NAM2P11325 894 aa2.47□□□□□ -2.01
CAF120YNL278W CUP2P15315 225 aa2.47□□□□□ -2.01
CAF120YNL278W ATP10P18496 279 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms