RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W MON2P48563 1636 aaPredicted RBP7.18□□□□□ -1.26
CAF120YNL278W INO80P53115 1489 aa6.55□□□□□ -1.36
CAF120YNL278W KOG1P38873 1557 aa6.49□□□□□ -1.37
CAF120YNL278W DNA2P38859 1522 aa6.38□□□□□ -1.39
CAF120YNL278W SPA2P23201 1466 aaKnown RBP6.34□□□□□ -1.39
CAF120YNL278W RSE1Q04693 1361 aaKnown RBP6.27□□□□□ -1.41
CAF120YNL278W SWR1Q05471 1514 aa6.23□□□□□ -1.41
CAF120YNL278W MIF2P35201 549 aa6.04□□□□□ -1.44
CAF120YNL278W TY1B-DR4Q07793 1604 aa6.03□□□□□ -1.44
CAF120YNL278W TCB3Q03640 1545 aaKnown RBP5.85□□□□□ -1.47
CAF120YNL278W THO2P53552 1597 aaKnown RBP5.77□□□□□ -1.49
CAF120YNL278W REV3P14284 1504 aa5.74□□□□□ -1.49
CAF120YNL278W MYO2P19524 1574 aaKnown RBP5.68□□□□□ -1.5
CAF120YNL278W PEP1P32319 1579 aa5.67□□□□□ -1.5
CAF120YNL278W IRC20Q06554 1556 aa5.65□□□□□ -1.5
CAF120YNL278W DNF1P32660 1571 aa5.64□□□□□ -1.51
CAF120YNL278W SSK2P53599 1579 aa5.58□□□□□ -1.52
CAF120YNL278W MDS3P53094 1487 aa5.55□□□□□ -1.52
CAF120YNL278W YFR006WP43590 535 aa5.49□□□□□ -1.53
CAF120YNL278W LTE1P07866 1435 aa5.49□□□□□ -1.53
CAF120YNL278W BNI1P41832 1953 aa5.48□□□□□ -1.53
CAF120YNL278W ESC1Q03661 1658 aaKnown RBP5.46□□□□□ -1.54
CAF120YNL278W MET5P47169 1442 aa5.43□□□□□ -1.54
CAF120YNL278W MTC1P47018 478 aaKnown RBP5.42□□□□□ -1.54
CAF120YNL278W BUD4P47136 1447 aa5.4□□□□□ -1.54
CAF120YNL278W BPT1P14772 1559 aa5.39□□□□□ -1.55
CAF120YNL278W RPA190P10964 1664 aaKnown RBP5.38□□□□□ -1.55
CAF120YNL278W HIR3P47171 1648 aa5.38□□□□□ -1.55
CAF120YNL278W SIN3P22579 1536 aa5.37□□□□□ -1.55
CAF120YNL278W CDC25P04821 1589 aa5.35□□□□□ -1.55
CAF120YNL278W YCF1P39109 1515 aaKnown RBP5.35□□□□□ -1.55
CAF120YNL278W YOR093CQ12275 1648 aa5.35□□□□□ -1.55
CAF120YNL278W HSL1P34244 1518 aa5.32□□□□□ -1.56
CAF120YNL278W CHD1P32657 1468 aa5.27□□□□□ -1.57
CAF120YNL278W XRN1P22147 1528 aaKnown RBP5.27□□□□□ -1.57
CAF120YNL278W ECM5Q03214 1411 aa5.26□□□□□ -1.57
CAF120YNL278W RPO31P04051 1460 aa5.25□□□□□ -1.57
CAF120YNL278W SPT6P23615 1451 aaKnown RBP5.23□□□□□ -1.57
CAF120YNL278W DNF2Q12675 1612 aa5.23□□□□□ -1.57
CAF120YNL278W SGS1P35187 1447 aa5.23□□□□□ -1.57
CAF120YNL278W ATG2P53855 1592 aa5.21□□□□□ -1.57
CAF120YNL278W GEA2P39993 1459 aaKnown RBP5.19□□□□□ -1.58
CAF120YNL278W SSN2P38931 1420 aa5.18□□□□□ -1.58
CAF120YNL278W RKR1Q04781 1562 aa5.18□□□□□ -1.58
CAF120YNL278W NTE1Q04958 1679 aa5.15□□□□□ -1.58
CAF120YNL278W DRS1P32892 752 aaKnown RBP5.15□□□□□ -1.59
CAF120YNL278W PDR15Q04182 1529 aaKnown RBP5.11□□□□□ -1.59
CAF120YNL278W SKI3P17883 1432 aaKnown RBP5.08□□□□□ -1.6
CAF120YNL278W ESP1Q03018 1630 aa5.04□□□□□ -1.6
CAF120YNL278W MMS1Q06211 1407 aa5.03□□□□□ -1.6
CAF120YNL278W NUP170P38181 1502 aa5.01□□□□□ -1.61
CAF120YNL278W PDR10P51533 1564 aa4.97□□□□□ -1.61
CAF120YNL278W TY1B-BRQ12193 1756 aa4.95□□□□□ -1.62
CAF120YNL278W TY1B-GR3Q12316 1755 aa4.95□□□□□ -1.62
CAF120YNL278W TY1B-ORQ92393 1755 aa4.95□□□□□ -1.62
CAF120YNL278W TY1B-DR3Q99231 1755 aa4.91□□□□□ -1.62
CAF120YNL278W FAP1P53971 965 aa4.91□□□□□ -1.62
CAF120YNL278W YPK9Q12697 1472 aa4.91□□□□□ -1.62
CAF120YNL278W DOP1Q03921 1698 aa4.9□□□□□ -1.63
CAF120YNL278W TY2B-LR1P0C2J3 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-FP0CX63 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-GR2P0CX64 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-CP25384 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-DR2Q03494 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY1B-DR1Q03855 1755 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-DR3Q07791 1770 aaKnown RBP4.89□□□□□ -1.63
CAF120YNL278W TY2B-OR1Q12113 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-DR1Q12472 1770 aa4.89□□□□□ -1.63
CAF120YNL278W TY2B-OR2Q12501 1770 aa4.89□□□□□ -1.63
CAF120YNL278W ABP1P15891 592 aaKnown RBP4.89□□□□□ -1.63
CAF120YNL278W TY1B-HO13535 1793 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-DR5P0C2I2 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-DR6P0C2I3 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-LR2P0C2I5 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-LR3P0C2I6 1755 aaKnown RBP4.88□□□□□ -1.63
CAF120YNL278W TY1B-PR1P0C2I9 1755 aaKnown RBP4.88□□□□□ -1.63
CAF120YNL278W TY1B-PR2P0C2J0 1756 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-PR3P0C2J1 1755 aaKnown RBP4.88□□□□□ -1.63
CAF120YNL278W TY1B-JR1P47098 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-ML2Q03434 1755 aaKnown RBP4.88□□□□□ -1.63
CAF120YNL278W TY1B-ER1Q03612 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-ML1Q04711 1755 aaKnown RBP4.88□□□□□ -1.63
CAF120YNL278W TY1B-GR2Q12269 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-OLQ12273 1755 aa4.88□□□□□ -1.63
CAF120YNL278W TY1B-PLQ12414 1755 aaKnown RBP4.88□□□□□ -1.63
CAF120YNL278W POL1P13382 1468 aa4.88□□□□□ -1.63
CAF120YNL278W TFA1P36100 482 aa4.88□□□□□ -1.63
CAF120YNL278W MYO4P32492 1471 aa4.87□□□□□ -1.63
CAF120YNL278W TY2B-BQ12491 1770 aa4.87□□□□□ -1.63
CAF120YNL278W TAF2P23255 1407 aa4.86□□□□□ -1.63
CAF120YNL278W MLP2P40457 1679 aa4.85□□□□□ -1.63
CAF120YNL278W YRF1-1P0CX20 1796 aa4.85□□□□□ -1.63
CAF120YNL278W YRF1-5P0CX21 1796 aa4.85□□□□□ -1.63
CAF120YNL278W YRF1-8P0CX22 1796 aa4.85□□□□□ -1.63
CAF120YNL278W DRS2P39524 1355 aa4.84□□□□□ -1.63
CAF120YNL278W PDR5P33302 1511 aaKnown RBP4.83□□□□□ -1.64
CAF120YNL278W STU1P38198 1513 aa4.82□□□□□ -1.64
CAF120YNL278W SPO14P36126 1683 aa4.81□□□□□ -1.64
CAF120YNL278W TRM3Q07527 1436 aa4.81□□□□□ -1.64
CAF120YNL278W PAN1P32521 1480 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms